vegas 6.1.1__tar.gz → 6.1.3__tar.gz

{vegas-6.1.1 → vegas-6.1.3}/CHANGES.txt

@@ -1,3 +1,18 @@
+Version 6.1.3 2024-07-08
+=========================
+Modified so that it works with numpy>=2.0.
+
+Version 6.1.2 2024-05-21
+========================
+
+- Fixes bug in implementation of PDFIntegrator's scale parameter. There was no 
+  problem when scale=1 but other values were wrong.
+
+- Fixes bug when calculating the number of degrees of freedom when averaging 
+  results over multiple iterations with multiple integrands.
+
+- Tweaks to PDFIntegrator.
+  
 Version 6.1.1 2024-04-19
 ========================
 - More robust treatment of round-off errors when calculating means and variances in vegas.

{vegas-6.1.1 → vegas-6.1.3}/PKG-INFO

@@ -1,14 +1,14 @@
 Metadata-Version: 2.1
 Name: vegas
-Version: 6.1.1
+Version: 6.1.3
 Summary: Tools for adaptive multidimensional Monte Carlo integration.
 Home-page: https://github.com/gplepage/vegas
 Author: G. Peter Lepage
 Author-email: g.p.lepage@cornell.edu
 License: GPLv3
-Requires-Python: >=2.7
+Requires-Python: >=3.9
 License-File: LICENSE.txt
-Requires-Dist: numpy>=1.16
+Requires-Dist: numpy>=1.24
 Requires-Dist: gvar>=13.0.1
 
 vegas

{vegas-6.1.1 → vegas-6.1.3}/doc/html/.buildinfo

@@ -1,4 +1,4 @@
 # Sphinx build info version 1
 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: 3ffdbcbb34458f7ebab10e3eb5163eac
+config: ffea898b9e82a916ac420a608eca0a9a
 tags: 645f666f9bcd5a90fca523b33c5a78b7

{vegas-6.1.1 → vegas-6.1.3}/doc/html/_sources/outliers.rst.txt

@@ -245,10 +245,10 @@ Note, from the correlation matrix, that the intercept and slope are
 anti-correlated, as one might guess for this fit. We can illustrate this 
 correlation and look for others by sampling the distribution associated
 with the modified PDF and using the samples to create histograms and 
-contour plots of the distributions. The following code uses 
+contour plots of the distributions. The following  code uses 
 :meth:`vegas.PDFIntegrator.sample` to sample the distribution, and 
 the :mod:`corner` Python module to make the plots (requires the 
-the :mod:`corner` and :mod:`arviz` Python modules, which are not included 
+the :mod:`corner` and :mod:`arviz` Python  modules, which are not included 
 in :mod:`vegas`)::
 
     import corner
@@ -265,7 +265,7 @@ in :mod:`vegas`)::
         fig = corner.corner(
             data=samples, weights=wgts, range=4*[0.99], 
             show_titles=True, quantiles=[0.16, 0.5, 0.84],
-            plot_datapoints=False, fill_contours=True,
+            plot_datapoints=False, fill_contours=True, smooth=1,
             contourf_kwargs=dict(cmap='Blues', colors=None),
             )
         plt.show()

{vegas-6.1.1 → vegas-6.1.3}/doc/html/_sources/tutorial.rst.txt

@@ -866,7 +866,7 @@ and the PDF used for expectation values::
     def f_f2(p):
         a = p['a']
         b = p['b']
-        fp = a[0] * a[1] + b
+        fp = a[0] * a[1] + 3 * b
         return [fp, fp ** 2]
 
     # <f_f2> in distribution g
@@ -888,12 +888,12 @@ variables, ``a[0]`` and ``a[1]``, and a third uncorrelated variable ``b``
 that is uniformly distributed on the interval [0,2] (see the :mod:`gvar` 
 documentation for more information).
 We use the integrator to calculated  the expectation value of 
-``fp = a[0] * a[1] + b`` and ``fp**2``, so we can compute the 
+``fp = a[0]*a[1] + 3*b`` and ``fp**2``, so we can compute the 
 mean and standard 
 deviation of the ``fp`` |~| distribution. The output from this code 
-shows that the Gaussian approximation 3.0(3.1) for the mean and 
+shows that the Gaussian approximation 5.0(3.8) for the mean and 
 standard deviation is not particularly 
-close to the correct value |~| 4.0(3.4):
+close to the correct value |~| 6.0(3.8):
 
 .. literalinclude:: eg7.out
 
@@ -911,7 +911,7 @@ than ``f_f2(p)`` above)::
     def f(p):
         a = p['a']
         b = p['b']
-        fp = a[0] * a[1] + b
+        fp = a[0] * a[1] + 3 * b
         return dict(a=a, b=b, fp=fp)
 
     r = g_ev.stats(f)
@@ -940,7 +940,9 @@ and/or ``histograms`` equal to ``True`` in :meth:`PDFIntegrator.stats`. The code
     r = g_ev.stats(f, moments=True, histograms=True)
     print('Statistics for fp:')
     print(r.stats['fp'])
-    r.stats['fp'].plot_histogram(show=True)
+    plt = r.stats['fp'].plot_histogram().show()
+    plt.xlabel('a[0] * a[1] + 3 * b')
+    plt.show()
 
 shows the statistical analysis for ``fp``:
 
@@ -956,7 +958,7 @@ each quantity come from the :mod:`vegas` integrations.
 
 The last line in 
 the code above displays the histogram
-for ``fp``, which confirms that it is not particularly Gaussian:
+for ``fp``, which confirms that it is not quite Gaussian:
 
 .. image:: eg7b-plt.*
    :width: 70%

{vegas-6.1.1 → vegas-6.1.3}/doc/html/_static/documentation_options.js

@@ -1,6 +1,6 @@
 var DOCUMENTATION_OPTIONS = {
     URL_ROOT: document.getElementById("documentation_options").getAttribute('data-url_root'),
-    VERSION: '6.1.1',
+    VERSION: '6.1.3',
     LANGUAGE: 'en',
     COLLAPSE_INDEX: false,
     BUILDER: 'html',

{vegas-6.1.1 → vegas-6.1.3}/doc/html/background.html

@@ -6,7 +6,7 @@
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.18.1: http://docutils.sourceforge.net/" />
 
-    <title>How vegas Works &#8212; vegas 6.1.1 documentation</title>
+    <title>How vegas Works &#8212; vegas 6.1.3 documentation</title>
     <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="_static/pyramid.css" />
     <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
@@ -41,7 +41,7 @@
         <li class="right" >
           <a href="c_fortran.html" title="Integrands in C or Fortran"
              accesskey="P">previous</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">vegas 6.1.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">vegas 6.1.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">How <code class="xref py py-mod docutils literal notranslate"><span class="pre">vegas</span></code> Works</a></li> 
       </ul>
     </div>  
@@ -379,7 +379,7 @@ integrals.</p>
         <li class="right" >
           <a href="c_fortran.html" title="Integrands in C or Fortran"
              >previous</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">vegas 6.1.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">vegas 6.1.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">How <code class="xref py py-mod docutils literal notranslate"><span class="pre">vegas</span></code> Works</a></li> 
       </ul>
     </div>

{vegas-6.1.1 → vegas-6.1.3}/doc/html/c_fortran.html

@@ -6,7 +6,7 @@
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.18.1: http://docutils.sourceforge.net/" />
 
-    <title>Integrands in C or Fortran &#8212; vegas 6.1.1 documentation</title>
+    <title>Integrands in C or Fortran &#8212; vegas 6.1.3 documentation</title>
     <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="_static/pyramid.css" />
     <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
@@ -41,7 +41,7 @@
         <li class="right" >
           <a href="tutorial.html" title="Tutorial"
              accesskey="P">previous</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">vegas 6.1.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">vegas 6.1.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">Integrands in C or Fortran</a></li> 
       </ul>
     </div>  
@@ -513,7 +513,7 @@ speed as the batch versions of the C code, above.</p>
         <li class="right" >
           <a href="tutorial.html" title="Tutorial"
              >previous</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">vegas 6.1.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">vegas 6.1.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">Integrands in C or Fortran</a></li> 
       </ul>
     </div>

{vegas-6.1.1 → vegas-6.1.3}/doc/html/genindex.html

@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>Index &#8212; vegas 6.1.1 documentation</title>
+    <title>Index &#8212; vegas 6.1.3 documentation</title>
     <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="_static/pyramid.css" />
     <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
@@ -32,7 +32,7 @@
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">vegas 6.1.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">vegas 6.1.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">Index</a></li> 
       </ul>
     </div>  
@@ -381,6 +381,14 @@
         <li><a href="vegas.html#vegas.PDFEVArray.vegas_mean">(vegas.PDFEVArray attribute)</a>
 </li>
         <li><a href="vegas.html#vegas.PDFEVDict.vegas_mean">(vegas.PDFEVDict attribute)</a>
+</li>
+      </ul></li>
+      <li><a href="vegas.html#vegas.PDFEV.vegas_sdev">vegas_sdev (vegas.PDFEV attribute)</a>
+
+      <ul>
+        <li><a href="vegas.html#vegas.PDFEVArray.vegas_sdev">(vegas.PDFEVArray attribute)</a>
+</li>
+        <li><a href="vegas.html#vegas.PDFEVDict.vegas_sdev">(vegas.PDFEVDict attribute)</a>
 </li>
       </ul></li>
   </ul></td>
@@ -417,7 +425,7 @@
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">vegas 6.1.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">vegas 6.1.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">Index</a></li> 
       </ul>
     </div>

{vegas-6.1.1 → vegas-6.1.3}/doc/html/index.html

@@ -6,7 +6,7 @@
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.18.1: http://docutils.sourceforge.net/" />
 
-    <title>vegas Documentation &#8212; vegas 6.1.1 documentation</title>
+    <title>vegas Documentation &#8212; vegas 6.1.3 documentation</title>
     <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="_static/pyramid.css" />
     <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
@@ -37,7 +37,7 @@
         <li class="right" >
           <a href="tutorial.html" title="Tutorial"
              accesskey="N">next</a> |</li>
-        <li class="nav-item nav-item-0"><a href="#">vegas 6.1.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="#">vegas 6.1.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">vegas Documentation</a></li> 
       </ul>
     </div>  
@@ -163,7 +163,7 @@
         <li class="right" >
           <a href="tutorial.html" title="Tutorial"
              >next</a> |</li>
-        <li class="nav-item nav-item-0"><a href="#">vegas 6.1.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="#">vegas 6.1.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">vegas Documentation</a></li> 
       </ul>
     </div>

{vegas-6.1.1 → vegas-6.1.3}/doc/html/outliers.html

@@ -6,7 +6,7 @@
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.18.1: http://docutils.sourceforge.net/" />
 
-    <title>Case Study: Bayesian Curve Fitting &#8212; vegas 6.1.1 documentation</title>
+    <title>Case Study: Bayesian Curve Fitting &#8212; vegas 6.1.3 documentation</title>
     <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="_static/pyramid.css" />
     <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
@@ -41,7 +41,7 @@
         <li class="right" >
           <a href="background.html" title="How vegas Works"
              accesskey="P">previous</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">vegas 6.1.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">vegas 6.1.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">Case Study: Bayesian Curve Fitting</a></li> 
       </ul>
     </div>  
@@ -246,25 +246,25 @@ reduces the time required for the integrations.</p>
 <p>The results  from this code are as follows:</p>
 <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="n">itn</span>   <span class="n">integral</span>        <span class="n">average</span>         <span class="n">chi2</span><span class="o">/</span><span class="n">dof</span>        <span class="n">Q</span>
 <span class="o">-------------------------------------------------------</span>
-  <span class="mi">1</span>   <span class="mf">4.437</span><span class="p">(</span><span class="mi">45</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>   <span class="mf">4.437</span><span class="p">(</span><span class="mi">45</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>       <span class="mf">0.00</span>     <span class="mf">1.00</span>
-  <span class="mi">2</span>   <span class="mf">4.457</span><span class="p">(</span><span class="mi">43</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>   <span class="mf">4.447</span><span class="p">(</span><span class="mi">31</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>       <span class="mf">0.30</span>     <span class="mf">1.00</span>
-  <span class="mi">3</span>   <span class="mf">4.509</span><span class="p">(</span><span class="mi">49</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>   <span class="mf">4.468</span><span class="p">(</span><span class="mi">26</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>       <span class="mf">0.81</span>     <span class="mf">0.76</span>
-  <span class="mi">4</span>   <span class="mf">4.548</span><span class="p">(</span><span class="mi">60</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>   <span class="mf">4.488</span><span class="p">(</span><span class="mi">25</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>       <span class="mf">0.61</span>     <span class="mf">0.98</span>
-  <span class="mi">5</span>   <span class="mf">4.491</span><span class="p">(</span><span class="mi">45</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>   <span class="mf">4.488</span><span class="p">(</span><span class="mi">22</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>       <span class="mf">0.54</span>     <span class="mf">1.00</span>
-  <span class="mi">6</span>   <span class="mf">4.523</span><span class="p">(</span><span class="mi">42</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>   <span class="mf">4.494</span><span class="p">(</span><span class="mi">20</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>       <span class="mf">0.57</span>     <span class="mf">1.00</span>
-  <span class="mi">7</span>   <span class="mf">4.444</span><span class="p">(</span><span class="mi">42</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>   <span class="mf">4.487</span><span class="p">(</span><span class="mi">18</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>       <span class="mf">0.58</span>     <span class="mf">1.00</span>
-  <span class="mi">8</span>   <span class="mf">4.433</span><span class="p">(</span><span class="mi">42</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>   <span class="mf">4.480</span><span class="p">(</span><span class="mi">16</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>       <span class="mf">0.62</span>     <span class="mf">1.00</span>
-  <span class="mi">9</span>   <span class="mf">4.530</span><span class="p">(</span><span class="mi">48</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>   <span class="mf">4.486</span><span class="p">(</span><span class="mi">16</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>       <span class="mf">0.62</span>     <span class="mf">1.00</span>
- <span class="mi">10</span>   <span class="mf">4.511</span><span class="p">(</span><span class="mi">47</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>   <span class="mf">4.488</span><span class="p">(</span><span class="mi">15</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>       <span class="mf">0.63</span>     <span class="mf">1.00</span>
+  <span class="mi">1</span>   <span class="mf">4.486</span><span class="p">(</span><span class="mi">46</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>   <span class="mf">4.486</span><span class="p">(</span><span class="mi">46</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>       <span class="mf">0.00</span>     <span class="mf">1.00</span>
+  <span class="mi">2</span>   <span class="mf">4.549</span><span class="p">(</span><span class="mi">47</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>   <span class="mf">4.518</span><span class="p">(</span><span class="mi">33</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>       <span class="mf">0.97</span>     <span class="mf">0.44</span>
+  <span class="mi">3</span>   <span class="mf">4.562</span><span class="p">(</span><span class="mi">48</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>   <span class="mf">4.532</span><span class="p">(</span><span class="mi">27</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>       <span class="mf">0.80</span>     <span class="mf">0.65</span>
+  <span class="mi">4</span>   <span class="mf">4.499</span><span class="p">(</span><span class="mi">46</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>   <span class="mf">4.524</span><span class="p">(</span><span class="mi">23</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>       <span class="mf">0.89</span>     <span class="mf">0.59</span>
+  <span class="mi">5</span>   <span class="mf">4.549</span><span class="p">(</span><span class="mi">45</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>   <span class="mf">4.529</span><span class="p">(</span><span class="mi">21</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>       <span class="mf">0.95</span>     <span class="mf">0.53</span>
+  <span class="mi">6</span>   <span class="mf">4.530</span><span class="p">(</span><span class="mi">45</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>   <span class="mf">4.529</span><span class="p">(</span><span class="mi">19</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>       <span class="mf">0.89</span>     <span class="mf">0.64</span>
+  <span class="mi">7</span>   <span class="mf">4.498</span><span class="p">(</span><span class="mi">47</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>   <span class="mf">4.525</span><span class="p">(</span><span class="mi">17</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>       <span class="mf">0.77</span>     <span class="mf">0.84</span>
+  <span class="mi">8</span>   <span class="mf">4.423</span><span class="p">(</span><span class="mi">48</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>   <span class="mf">4.512</span><span class="p">(</span><span class="mi">16</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>       <span class="mf">0.81</span>     <span class="mf">0.81</span>
+  <span class="mi">9</span>   <span class="mf">4.573</span><span class="p">(</span><span class="mi">50</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>   <span class="mf">4.519</span><span class="p">(</span><span class="mi">16</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>       <span class="mf">0.84</span>     <span class="mf">0.78</span>
+ <span class="mi">10</span>   <span class="mf">4.439</span><span class="p">(</span><span class="mi">45</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>   <span class="mf">4.511</span><span class="p">(</span><span class="mi">15</span><span class="p">)</span><span class="n">e</span><span class="o">-</span><span class="mi">11</span>       <span class="mf">0.90</span>     <span class="mf">0.67</span>
 
 <span class="n">Bayesian</span> <span class="n">fit</span> <span class="n">results</span><span class="p">:</span>
-      <span class="n">c</span> <span class="o">=</span> <span class="p">[</span><span class="mf">0.29</span><span class="p">(</span><span class="mi">14</span><span class="p">)</span> <span class="mf">0.620</span><span class="p">(</span><span class="mi">58</span><span class="p">)]</span>
- <span class="n">corr_c</span> <span class="o">=</span> <span class="p">[[</span> <span class="mf">1.</span>    <span class="o">-</span><span class="mf">0.897</span><span class="p">]</span>
-           <span class="p">[</span><span class="o">-</span><span class="mf">0.897</span>  <span class="mf">1.</span>   <span class="p">]]</span>
-      <span class="n">b</span> <span class="o">=</span> <span class="mf">10.6</span><span class="p">(</span><span class="mf">3.7</span><span class="p">)</span>
+      <span class="n">c</span> <span class="o">=</span> <span class="p">[</span><span class="mf">0.29</span><span class="p">(</span><span class="mi">13</span><span class="p">)</span> <span class="mf">0.619</span><span class="p">(</span><span class="mi">57</span><span class="p">)]</span>
+ <span class="n">corr_c</span> <span class="o">=</span> <span class="p">[[</span> <span class="mf">1.</span>    <span class="o">-</span><span class="mf">0.894</span><span class="p">]</span>
+           <span class="p">[</span><span class="o">-</span><span class="mf">0.894</span>  <span class="mf">1.</span>   <span class="p">]]</span>
+      <span class="n">b</span> <span class="o">=</span> <span class="mf">10.6</span><span class="p">(</span><span class="mf">3.6</span><span class="p">)</span>
       <span class="n">w</span> <span class="o">=</span> <span class="mf">0.27</span><span class="p">(</span><span class="mi">12</span><span class="p">)</span>
 
-  <span class="n">logBF</span> <span class="o">=</span> <span class="o">-</span><span class="mf">23.8270</span><span class="p">(</span><span class="mi">33</span><span class="p">)</span>
+  <span class="n">logBF</span> <span class="o">=</span> <span class="o">-</span><span class="mf">23.8219</span><span class="p">(</span><span class="mi">33</span><span class="p">)</span>
 </pre></div>
 </div>
 <p>The table shows results for the normalization of the
@@ -290,10 +290,10 @@ there is a failure.</p>
 anti-correlated, as one might guess for this fit. We can illustrate this
 correlation and look for others by sampling the distribution associated
 with the modified PDF and using the samples to create histograms and
-contour plots of the distributions. The following code uses
+contour plots of the distributions. The following  code uses
 <a class="reference internal" href="vegas.html#vegas.PDFIntegrator.sample" title="vegas.PDFIntegrator.sample"><code class="xref py py-meth docutils literal notranslate"><span class="pre">vegas.PDFIntegrator.sample()</span></code></a> to sample the distribution, and
 the <code class="xref py py-mod docutils literal notranslate"><span class="pre">corner</span></code> Python module to make the plots (requires the
-the <code class="xref py py-mod docutils literal notranslate"><span class="pre">corner</span></code> and <code class="xref py py-mod docutils literal notranslate"><span class="pre">arviz</span></code> Python modules, which are not included
+the <code class="xref py py-mod docutils literal notranslate"><span class="pre">corner</span></code> and <code class="xref py py-mod docutils literal notranslate"><span class="pre">arviz</span></code> Python  modules, which are not included
 in <a class="reference internal" href="vegas.html#module-vegas" title="vegas: Adaptive multidimensional Monte Carlo integration"><code class="xref py py-mod docutils literal notranslate"><span class="pre">vegas</span></code></a>):</p>
 <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="kn">import</span> <span class="nn">corner</span>
 <span class="kn">import</span> <span class="nn">matplotlib.pyplot</span> <span class="k">as</span> <span class="nn">plt</span>
@@ -309,7 +309,7 @@ in <a class="reference internal" href="vegas.html#module-vegas" title="vegas: Ad
     <span class="n">fig</span> <span class="o">=</span> <span class="n">corner</span><span class="o">.</span><span class="n">corner</span><span class="p">(</span>
         <span class="n">data</span><span class="o">=</span><span class="n">samples</span><span class="p">,</span> <span class="n">weights</span><span class="o">=</span><span class="n">wgts</span><span class="p">,</span> <span class="nb">range</span><span class="o">=</span><span class="mi">4</span><span class="o">*</span><span class="p">[</span><span class="mf">0.99</span><span class="p">],</span>
         <span class="n">show_titles</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span> <span class="n">quantiles</span><span class="o">=</span><span class="p">[</span><span class="mf">0.16</span><span class="p">,</span> <span class="mf">0.5</span><span class="p">,</span> <span class="mf">0.84</span><span class="p">],</span>
-        <span class="n">plot_datapoints</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span> <span class="n">fill_contours</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span>
+        <span class="n">plot_datapoints</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span> <span class="n">fill_contours</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span> <span class="n">smooth</span><span class="o">=</span><span class="mi">1</span><span class="p">,</span>
         <span class="n">contourf_kwargs</span><span class="o">=</span><span class="nb">dict</span><span class="p">(</span><span class="n">cmap</span><span class="o">=</span><span class="s1">&#39;Blues&#39;</span><span class="p">,</span> <span class="n">colors</span><span class="o">=</span><span class="kc">None</span><span class="p">),</span>
         <span class="p">)</span>
     <span class="n">plt</span><span class="o">.</span><span class="n">show</span><span class="p">()</span>
@@ -475,7 +475,7 @@ example, the intercept would be 0.35(17).</p>
         <li class="right" >
           <a href="background.html" title="How vegas Works"
              >previous</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">vegas 6.1.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">vegas 6.1.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">Case Study: Bayesian Curve Fitting</a></li> 
       </ul>
     </div>

{vegas-6.1.1 → vegas-6.1.3}/doc/html/py-modindex.html

@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>Python Module Index &#8212; vegas 6.1.1 documentation</title>
+    <title>Python Module Index &#8212; vegas 6.1.3 documentation</title>
     <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="_static/pyramid.css" />
     <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
@@ -39,7 +39,7 @@
         <li class="right" >
           <a href="#" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">vegas 6.1.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">vegas 6.1.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">Python Module Index</a></li> 
       </ul>
     </div>  
@@ -97,7 +97,7 @@
         <li class="right" >
           <a href="#" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">vegas 6.1.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">vegas 6.1.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">Python Module Index</a></li> 
       </ul>
     </div>

{vegas-6.1.1 → vegas-6.1.3}/doc/html/search.html

@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>Search &#8212; vegas 6.1.1 documentation</title>
+    <title>Search &#8212; vegas 6.1.3 documentation</title>
     <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="_static/pyramid.css" />
     
@@ -38,7 +38,7 @@
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">vegas 6.1.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">vegas 6.1.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">Search</a></li> 
       </ul>
     </div>  
@@ -98,7 +98,7 @@
         <li class="right" >
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
-        <li class="nav-item nav-item-0"><a href="index.html">vegas 6.1.1 documentation</a> &#187;</li>
+        <li class="nav-item nav-item-0"><a href="index.html">vegas 6.1.3 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">Search</a></li> 
       </ul>
     </div>