upgini 1.1.264a1__tar.gz → 1.1.266a1__tar.gz

{upgini-1.1.264a1/src/upgini.egg-info → upgini-1.1.266a1}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: upgini
-Version: 1.1.264a1
+Version: 1.1.266a1
 Summary: Intelligent data search & enrichment for Machine Learning
 Home-page: https://upgini.com/
 Author: Upgini Developers

{upgini-1.1.264a1 → upgini-1.1.266a1}/setup.py

@@ -40,7 +40,7 @@ def send_log(msg: str):
 
 
 here = Path(__file__).parent.resolve()
-version = "1.1.264a1"
+version = "1.1.266a1"
 try:
     send_log(f"Start setup PyLib version {version}")
     setup(

upgini-1.1.266a1/src/upgini/autofe/date.py

@@ -0,0 +1,109 @@
+import abc
+from typing import Any, List, Optional, Union
+import numpy as np
+import pandas as pd
+from pydantic import BaseModel
+
+from upgini.autofe.operand import PandasOperand
+
+
+class DateDiffMixin(BaseModel):
+    diff_unit: str = "D"
+    left_unit: Optional[str] = None
+    right_unit: Optional[str] = None
+
+    def _convert_to_date(
+        self, x: Union[pd.DataFrame, pd.Series], unit: Optional[str]
+    ) -> Union[pd.DataFrame, pd.Series]:
+        if isinstance(x, pd.DataFrame):
+            return x.apply(lambda y: self._convert_to_date(y, unit), axis=1)
+
+        return pd.to_datetime(x, unit=unit)
+
+
+class DateDiff(PandasOperand, DateDiffMixin):
+    name = "date_diff"
+    is_binary = True
+    has_symmetry_importance = True
+
+    def calculate_binary(self, left: pd.Series, right: pd.Series) -> pd.Series:
+        left = self._convert_to_date(left, self.left_unit)
+        right = self._convert_to_date(right, self.right_unit)
+        return self.__replace_negative((left - right) / np.timedelta64(1, self.diff_unit))
+
+    def __replace_negative(self, x: Union[pd.DataFrame, pd.Series]):
+        x[x < 0] = None
+        return x
+
+
+class DateDiffType2(PandasOperand, DateDiffMixin):
+    name = "date_diff_type2"
+    is_binary = True
+    has_symmetry_importance = True
+
+    def calculate_binary(self, left: pd.Series, right: pd.Series) -> pd.Series:
+        left = self._convert_to_date(left, self.left_unit)
+        right = self._convert_to_date(right, self.right_unit)
+        future = right + (left.dt.year - right.dt.year).apply(
+            lambda y: np.datetime64("NaT") if np.isnan(y) else pd.tseries.offsets.DateOffset(years=y)
+        )
+        before = future[future < left]
+        future[future < left] = before + pd.tseries.offsets.DateOffset(years=1)
+        diff = (future - left) / np.timedelta64(1, self.diff_unit)
+
+        return diff
+
+
+class DateListDiff(PandasOperand, DateDiffMixin):
+    is_binary = True
+    has_symmetry_importance = True
+    aggregation: str
+
+    def __init__(self, **data: Any) -> None:
+        if "name" not in data:
+            data["name"] = f"date_diff_{data.get('aggregation')}"
+        super().__init__(**data)
+
+    def map_diff(self, left: np.datetime64, right: list) -> list:
+        return (left - self._convert_to_date(pd.Series(right), self.right_unit)) / np.timedelta64(1, self.diff_unit)
+
+    def reduce(self, diff_list: pd.Series) -> float:
+        return diff_list[diff_list > 0].aggregate(self.aggregation)
+
+    def calculate_binary(self, left: pd.Series, right: pd.Series) -> pd.Series:
+        left = self._convert_to_date(left, self.left_unit)
+
+        return pd.Series(left.index.map(lambda i: self.reduce(self.map_diff(left.loc[i], right.loc[i]))))
+
+
+class DateListDiffBounded(DateListDiff):
+    lower_bound: Optional[int]
+    upper_bound: Optional[int]
+    inclusive: Optional[str]
+
+    def __init__(self, **data: Any) -> None:
+        if "name" not in data:
+            inclusive = data.get("inclusive")
+            lower_bound = data.get("lower_bound")
+            upper_bound = data.get("upper_bound")
+            components = [
+                "date_diff",
+                data.get("diff_unit"),
+                str(lower_bound if lower_bound is not None else "minusinf"),
+                str(upper_bound if upper_bound is not None else "plusinf"),
+            ]
+            if inclusive:
+                components.append(inclusive)
+            components.append(data.get("aggregation"))
+            data["name"] = "_".join(components)
+        super().__init__(**data)
+
+    def reduce(self, diff_list: pd.Series) -> float:
+        return diff_list[
+            (diff_list > 0)
+            & (
+                diff_list.between(
+                    self.lower_bound or -np.inf, self.upper_bound or np.inf, inclusive=self.inclusive or "left"
+                )
+            )
+        ].aggregate(self.aggregation)

{upgini-1.1.264a1 → upgini-1.1.266a1}/src/upgini/features_enricher.py

@@ -70,6 +70,7 @@ from upgini.utils.datetime_utils import (
     DateTimeSearchKeyConverter,
     is_blocked_time_series,
     is_time_series,
+    validate_dates_distribution,
 )
 from upgini.utils.deduplicate_utils import (
     clean_full_duplicates,
@@ -1922,7 +1923,7 @@ class FeaturesEnricher(TransformerMixin):
 
             meaning_types = {col: key.value for col, key in search_keys.items()}
             non_keys_columns = [column for column in df.columns if column not in search_keys.keys()]
-            # Don't pass 
+
             if email_converted_to_hem:
                 non_keys_columns.append(email_column)
 
@@ -2221,6 +2222,10 @@ class FeaturesEnricher(TransformerMixin):
         self.fit_search_keys = self.search_keys.copy()
         self.fit_search_keys = self.__prepare_search_keys(validated_X, self.fit_search_keys, is_demo_dataset)
 
+        validate_dates_distribution(
+            validated_X, self.fit_search_keys, self.logger, self.bundle, self.warning_counter
+        )
+
         has_date = self._get_date_column(self.fit_search_keys) is not None
         model_task_type = self.model_task_type or define_task(validated_y, has_date, self.logger)
         self._validate_binary_observations(validated_y, model_task_type)

{upgini-1.1.264a1 → upgini-1.1.266a1}/src/upgini/resource_bundle/strings.properties

@@ -111,6 +111,7 @@ x_is_empty=X is empty
 y_is_empty=y is empty
 x_contains_reserved_column_name=Column name {} is reserved. Please rename column and try again
 missing_generate_feature=\nWARNING: Feature {} specified in `generate_features` is not present in input columns: {}
+x_unstable_by_date=\nWARNING: Your training sample is unstable in number of rows per date. It is recommended to redesign the training sample.
     # eval set validation
 unsupported_type_eval_set=Unsupported type of eval_set: {}. It should be list of tuples with two elements: X and y
 eval_set_invalid_tuple_size=eval_set contains a tuple of size {}. It should contain only pairs of X and y

{upgini-1.1.264a1 → upgini-1.1.266a1}/src/upgini/utils/datetime_utils.py

@@ -1,7 +1,7 @@
 import datetime
 import logging
 import re
-from typing import List, Optional
+from typing import Dict, List, Optional
 
 import numpy as np
 import pandas as pd
@@ -9,7 +9,9 @@ from dateutil.relativedelta import relativedelta
 from pandas.api.types import is_numeric_dtype, is_period_dtype, is_string_dtype
 
 from upgini.errors import ValidationError
+from upgini.metadata import SearchKey
 from upgini.resource_bundle import ResourceBundle, get_custom_bundle
+from upgini.utils.warning_counter import WarningCounter
 
 DATE_FORMATS = [
     "%Y-%m-%d",
@@ -225,3 +227,49 @@ def is_blocked_time_series(df: pd.DataFrame, date_col: str, search_keys: List[st
 
     is_diff_less_than_two_columns = grouped.apply(check_differences)
     return is_diff_less_than_two_columns.all()
+
+
+def validate_dates_distribution(
+    X: pd.DataFrame,
+    search_keys: Dict[str, SearchKey],
+    logger: Optional[logging.Logger] = None,
+    bundle: Optional[ResourceBundle] = None,
+    warning_counter: Optional[WarningCounter] = None,
+):
+    maybe_date_col = None
+    for key, key_type in search_keys.items():
+        if key_type in [SearchKey.DATE, SearchKey.DATETIME]:
+            maybe_date_col = key
+
+    if maybe_date_col is None:
+        for col in X.columns:
+            if col in search_keys:
+                continue
+            try:
+                pd.to_datetime(X[col])
+                maybe_date_col = col
+                break
+            except Exception:
+                pass
+
+    if maybe_date_col is None:
+        return
+
+    dates = pd.to_datetime(X[maybe_date_col]).dt.date
+
+    date_counts = dates.value_counts().sort_index()
+
+    date_counts_1 = date_counts[: round(len(date_counts) / 2)]
+    date_counts_2 = date_counts[round(len(date_counts) / 2) :]
+    ratio = date_counts_2.mean() / date_counts_1.mean()
+
+    if ratio > 1.2 or ratio < 0.8:
+        if warning_counter is not None:
+            warning_counter.increment()
+        if logger is None:
+            logger = logging.getLogger("muted_logger")
+            logger.setLevel("FATAL")
+        bundle = bundle or get_custom_bundle()
+        msg = bundle.get("x_unstable_by_date")
+        print(msg)
+        logger.warning(msg)

{upgini-1.1.264a1 → upgini-1.1.266a1}/src/upgini/utils/target_utils.py

@@ -132,9 +132,7 @@ def balance_undersample(
                 class_value = classes[class_idx]
                 class_count = vc[class_value]
                 sample_strategy[class_value] = min(class_count, quantile25_class_cnt * multiclass_bootstrap_loops)
-            sampler = RandomUnderSampler(
-                sampling_strategy=sample_strategy, random_state=random_state
-            )
+            sampler = RandomUnderSampler(sampling_strategy=sample_strategy, random_state=random_state)
             X = df[SYSTEM_RECORD_ID]
             X = X.to_frame(SYSTEM_RECORD_ID)
             new_x, _ = sampler.fit_resample(X, target)  # type: ignore
@@ -153,9 +151,7 @@ def balance_undersample(
         minority_class = df[df[target_column] == min_class_value]
         majority_class = df[df[target_column] != min_class_value]
         sample_size = min(len(majority_class), min_sample_threshold - min_class_count)
-        sampled_majority_class = majority_class.sample(
-            n=sample_size, random_state=random_state
-        )
+        sampled_majority_class = majority_class.sample(n=sample_size, random_state=random_state)
         resampled_data = df[
             (df[SYSTEM_RECORD_ID].isin(minority_class[SYSTEM_RECORD_ID]))
             | (df[SYSTEM_RECORD_ID].isin(sampled_majority_class[SYSTEM_RECORD_ID]))

{upgini-1.1.264a1 → upgini-1.1.266a1/src/upgini.egg-info}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: upgini
-Version: 1.1.264a1
+Version: 1.1.266a1
 Summary: Intelligent data search & enrichment for Machine Learning
 Home-page: https://upgini.com/
 Author: Upgini Developers

{upgini-1.1.264a1 → upgini-1.1.266a1}/src/upgini.egg-info/SOURCES.txt

@@ -7,7 +7,6 @@ src/upgini/ads.py
 src/upgini/dataset.py
 src/upgini/errors.py
 src/upgini/features_enricher.py
-src/upgini/fingerprint.js
 src/upgini/http.py
 src/upgini/metadata.py
 src/upgini/metrics.py

upgini-1.1.266a1/tests/test_autofe_operands.py

@@ -0,0 +1,93 @@
+import pandas as pd
+from upgini.autofe.date import DateDiff, DateDiffType2, DateListDiff, DateListDiffBounded
+
+from datetime import datetime
+from pandas.testing import assert_series_equal
+
+
+def test_date_diff():
+    df = pd.DataFrame(
+        [
+            ["2022-10-10", pd.to_datetime("1993-12-10").timestamp()],
+            ["2022-10-10", pd.to_datetime("2023-10-10").timestamp()],
+        ],
+        columns=["date1", "date2"],
+    )
+
+    operand = DateDiff(right_unit="s")
+    expected_result = pd.Series([10531, None])
+    assert_series_equal(operand.calculate_binary(df.date1, df.date2), expected_result)
+
+
+def test_date_diff_type2():
+    df = pd.DataFrame(
+        [
+            [pd.to_datetime("2022-10-10").timestamp(), datetime(1993, 12, 10)],
+            [pd.to_datetime("2022-10-10").timestamp(), datetime(1993, 4, 10)],
+        ],
+        columns=["date1", "date2"],
+    )
+
+    operand = DateDiffType2(left_unit="s")
+    expected_result = pd.Series([61.0, 182.0])
+    assert_series_equal(operand.calculate_binary(df.date1, df.date2), expected_result)
+
+
+def test_date_diff_list():
+    df = pd.DataFrame(
+        [
+            ["2022-10-10", ["1993-12-10", "1993-12-11"]],
+            ["2022-10-10", ["1993-12-10", "1993-12-10"]],
+            ["2022-10-10", ["2023-10-10"]],
+            ["2022-10-10", []],
+        ],
+        columns=["date1", "date2"],
+    )
+
+    def check(aggregation, expected_name, expected_values):
+        operand = DateListDiff(aggregation=aggregation)
+        assert operand.name == expected_name
+        assert_series_equal(operand.calculate_binary(df.date1, df.date2), expected_values)
+
+    check(aggregation="min", expected_name="date_diff_min", expected_values=pd.Series([10530, 10531, None, None]))
+    check(aggregation="max", expected_name="date_diff_max", expected_values=pd.Series([10531, 10531, None, None]))
+    check(aggregation="mean", expected_name="date_diff_mean", expected_values=pd.Series([10530.5, 10531, None, None]))
+    check(aggregation="nunique", expected_name="date_diff_nunique", expected_values=pd.Series([2, 1, 0, 0]))
+
+
+def test_date_diff_list_bounded():
+    df = pd.DataFrame(
+        [
+            ["2022-10-10", ["2013-12-10", "2013-12-11", "1999-12-11"]],
+            [
+                "2022-10-10",
+                [
+                    "2013-12-10",
+                    "2003-12-11",
+                    "1999-12-11",
+                    "1993-12-11",
+                    "1983-12-11",
+                    "1973-12-11",
+                    "1959-12-11",
+                ],
+            ],
+            ["2022-10-10", ["2003-12-10", "2003-12-10"]],
+            ["2022-10-10", ["2023-10-10", "1993-12-10"]],
+            ["2022-10-10", []],
+        ],
+        columns=["date1", "date2"],
+    )
+
+    def check_num_by_years(lower_bound, upper_bound, expected_name, expected_values):
+        operand = DateListDiffBounded(
+            diff_unit="Y", aggregation="count", lower_bound=lower_bound, upper_bound=upper_bound
+        )
+        assert operand.name == expected_name
+        assert_series_equal(operand.calculate_binary(df.date1, df.date2), expected_values)
+
+    check_num_by_years(0, 18, "date_diff_Y_0_18_count", pd.Series([2, 1, 0, 0, 0]))
+    check_num_by_years(18, 23, "date_diff_Y_18_23_count", pd.Series([1, 2, 2, 0, 0]))
+    check_num_by_years(23, 30, "date_diff_Y_23_30_count", pd.Series([0, 1, 0, 1, 0]))
+    check_num_by_years(30, 45, "date_diff_Y_30_45_count", pd.Series([0, 1, 0, 0, 0]))
+    check_num_by_years(45, 60, "date_diff_Y_45_60_count", pd.Series([0, 1, 0, 0, 0]))
+    check_num_by_years(60, None, "date_diff_Y_60_plusinf_count", pd.Series([0, 1, 0, 0, 0]))

{upgini-1.1.264a1 → upgini-1.1.266a1}/tests/test_datetime_utils.py

@@ -1,7 +1,13 @@
-import pandas as pd
 import numpy as np
+import pandas as pd
 
-from upgini.utils.datetime_utils import is_blocked_time_series, is_time_series
+from upgini.metadata import SearchKey
+from upgini.utils.datetime_utils import (
+    is_blocked_time_series,
+    is_time_series,
+    validate_dates_distribution,
+)
+from upgini.utils.warning_counter import WarningCounter
 
 pd.set_option("mode.chained_assignment", "raise")
 
@@ -183,3 +189,25 @@ def test_multivariate_time_series():
     assert not is_blocked_time_series(df, "date", ["date"])
 
     assert is_blocked_time_series(df, "date", ["date", "feature3"])
+
+
+def test_validate_dates_distribution():
+    df = pd.DataFrame({"date": ["2020-01-01"] * 10 + ["2020-02-01"] * 20 + ["2020-03-01"] * 30 + ["2020-04-01"] * 40})
+    warning_counter = WarningCounter()
+    validate_dates_distribution(df, {}, warning_counter=warning_counter)
+    assert warning_counter.has_warnings()
+
+    df = pd.DataFrame({"date": ["2020-05-01"] * 10 + ["2020-02-01"] * 20 + ["2020-03-01"] * 30 + ["2020-04-01"] * 40})
+    warning_counter = WarningCounter()
+    validate_dates_distribution(df, {}, warning_counter=warning_counter)
+    assert not warning_counter.has_warnings()
+
+    df = pd.DataFrame(
+        {
+            "date2": ["2020-05-01"] * 10 + ["2020-02-01"] * 20 + ["2020-03-01"] * 30 + ["2020-04-01"] * 40,
+            "date1": ["2020-01-01"] * 10 + ["2020-02-01"] * 20 + ["2020-03-01"] * 30 + ["2020-04-01"] * 40,
+        }
+    )
+    warning_counter = WarningCounter()
+    validate_dates_distribution(df, {"date1": SearchKey.DATE}, warning_counter=warning_counter)
+    assert warning_counter.has_warnings()

{upgini-1.1.264a1 → upgini-1.1.266a1}/tests/test_features_enricher.py

@@ -2164,6 +2164,8 @@ def test_idempotent_order_with_imbalanced_dataset(requests_mock: Mocker):
 
             actual_result_df = result_wrapper.df.sort_values(by="system_record_id").reset_index(drop=True)
             # actual_result_df.to_parquet(expected_result_path)
+            actual_result_df["phone_num_a54a33"] = actual_result_df["phone_num_a54a33"].astype("Int64")
+            actual_result_df["rep_date_f5d6bb"] = actual_result_df["rep_date_f5d6bb"].astype("Int64")
             assert_frame_equal(actual_result_df, expected_result_df)
 
         for i in range(5):

upgini-1.1.264a1/src/upgini/autofe/date.py

@@ -1,53 +0,0 @@
-from typing import Optional, Union
-import numpy as np
-import pandas as pd
-
-from upgini.autofe.operand import PandasOperand
-
-
-class DateDiffMixin:
-    diff_unit: str = "D"
-    left_unit: Optional[str] = None
-    right_unit: Optional[str] = None
-
-    def _convert_to_date(
-        self, x: Union[pd.DataFrame, pd.Series], unit: Optional[str]
-    ) -> Union[pd.DataFrame, pd.Series]:
-        if isinstance(x, pd.DataFrame):
-            return x.apply(lambda y: self._convert_to_date(y, unit), axis=1)
-
-        return pd.to_datetime(x, unit=unit)
-
-
-class DateDiff(PandasOperand, DateDiffMixin):
-    name = "date_diff"
-    is_binary = True
-    has_symmetry_importance = True
-
-    def calculate_binary(self, left: pd.Series, right: pd.Series) -> pd.Series:
-        left = self._convert_to_date(left, self.left_unit)
-        right = self._convert_to_date(right, self.right_unit)
-        return self.__replace_negative((left - right) / np.timedelta64(1, self.diff_unit))
-
-    def __replace_negative(self, x: Union[pd.DataFrame, pd.Series]):
-        x[x < 0] = None
-        return x
-
-
-class DateDiffType2(PandasOperand, DateDiffMixin):
-    name = "date_diff_type2"
-    is_binary = True
-    has_symmetry_importance = True
-    is_vectorizable = False
-
-    def calculate_binary(self, left: pd.Series, right: pd.Series) -> pd.Series:
-        left = self._convert_to_date(left, self.left_unit)
-        right = self._convert_to_date(right, self.right_unit)
-        future = right + (left.dt.year - right.dt.year).apply(
-            lambda y: np.datetime64("NaT") if np.isnan(y) else pd.tseries.offsets.DateOffset(years=y)
-        )
-        before = future[future < left]
-        future[future < left] = before + pd.tseries.offsets.DateOffset(years=1)
-        diff = (future - left) / np.timedelta64(1, self.diff_unit)
-
-        return diff

upgini-1.1.264a1/src/upgini/fingerprint.js

@@ -1,8 +0,0 @@
-/**
- * FingerprintJS v3.4.2 - Copyright (c) FingerprintJS, Inc, 2023 (https://fingerprint.com)
- * Licensed under the MIT (http://www.opensource.org/licenses/mit-license.php) license.
- *
- * This software contains code from open-source projects:
- * MurmurHash3 by Karan Lyons (https://github.com/karanlyons/murmurHash3.js)
- */
-var e=function(){return e=Object.assign||function(e){for(var n,t=1,r=arguments.length;t<r;t++)for(var o in n=arguments[t])Object.prototype.hasOwnProperty.call(n,o)&&(e[o]=n[o]);return e},e.apply(this,arguments)};function n(e,n,t,r){return new(t||(t=Promise))((function(o,a){function i(e){try{u(r.next(e))}catch(n){a(n)}}function c(e){try{u(r.throw(e))}catch(n){a(n)}}function u(e){var n;e.done?o(e.value):(n=e.value,n instanceof t?n:new t((function(e){e(n)}))).then(i,c)}u((r=r.apply(e,n||[])).next())}))}function t(e,n){var t,r,o,a,i={label:0,sent:function(){if(1&o[0])throw o[1];return o[1]},trys:[],ops:[]};return a={next:c(0),throw:c(1),return:c(2)},"function"==typeof Symbol&&(a[Symbol.iterator]=function(){return this}),a;function c(c){return function(u){return function(c){if(t)throw new TypeError("Generator is already executing.");for(;a&&(a=0,c[0]&&(i=0)),i;)try{if(t=1,r&&(o=2&c[0]?r.return:c[0]?r.throw||((o=r.return)&&o.call(r),0):r.next)&&!(o=o.call(r,c[1])).done)return 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upgini-1.1.264a1/tests/test_autofe_operands.py

@@ -1,27 +0,0 @@
-import pandas as pd
-from upgini.autofe.date import DateDiff, DateDiffType2
-
-from datetime import datetime
-from pandas.testing import assert_series_equal
-
-
-def test_date_diff():
-    df = pd.DataFrame(
-        [[datetime(1993, 12, 10), datetime(2022, 10, 10)], [datetime(2023, 10, 10), datetime(2022, 10, 10)]],
-        columns=["date1", "date2"],
-    )
-
-    operand = DateDiff()
-    expected_result = pd.Series([10531, None])
-    assert_series_equal(operand.calculate_binary(df.date2, df.date1), expected_result)
-
-
-def test_date_diff_future():
-    df = pd.DataFrame(
-        [[datetime(1993, 12, 10), datetime(2022, 10, 10)], [datetime(1993, 4, 10), datetime(2022, 10, 10)]],
-        columns=["date1", "date2"],
-    )
-
-    operand = DateDiffType2()
-    expected_result = pd.Series([61.0, 182.0])
-    assert_series_equal(operand.calculate_binary(df.date2, df.date1), expected_result)