uht-tooling 0.1.5__tar.gz → 0.1.6__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {uht_tooling-0.1.5 → uht_tooling-0.1.6}/PKG-INFO +6 -3
- {uht_tooling-0.1.5 → uht_tooling-0.1.6}/README.md +4 -2
- {uht_tooling-0.1.5 → uht_tooling-0.1.6}/pyproject.toml +2 -1
- {uht_tooling-0.1.5 → uht_tooling-0.1.6}/src/uht_tooling.egg-info/PKG-INFO +6 -3
- {uht_tooling-0.1.5 → uht_tooling-0.1.6}/src/uht_tooling.egg-info/requires.txt +1 -0
- {uht_tooling-0.1.5 → uht_tooling-0.1.6}/setup.cfg +0 -0
- {uht_tooling-0.1.5 → uht_tooling-0.1.6}/src/uht_tooling/__init__.py +0 -0
- {uht_tooling-0.1.5 → uht_tooling-0.1.6}/src/uht_tooling/cli.py +0 -0
- {uht_tooling-0.1.5 → uht_tooling-0.1.6}/src/uht_tooling/models/__init__.py +0 -0
- {uht_tooling-0.1.5 → uht_tooling-0.1.6}/src/uht_tooling/workflows/__init__.py +0 -0
- {uht_tooling-0.1.5 → uht_tooling-0.1.6}/src/uht_tooling/workflows/design_gibson.py +0 -0
- {uht_tooling-0.1.5 → uht_tooling-0.1.6}/src/uht_tooling/workflows/design_slim.py +0 -0
- {uht_tooling-0.1.5 → uht_tooling-0.1.6}/src/uht_tooling/workflows/gui.py +0 -0
- {uht_tooling-0.1.5 → uht_tooling-0.1.6}/src/uht_tooling/workflows/mut_rate.py +0 -0
- {uht_tooling-0.1.5 → uht_tooling-0.1.6}/src/uht_tooling/workflows/mutation_caller.py +0 -0
- {uht_tooling-0.1.5 → uht_tooling-0.1.6}/src/uht_tooling/workflows/nextera_designer.py +0 -0
- {uht_tooling-0.1.5 → uht_tooling-0.1.6}/src/uht_tooling/workflows/profile_inserts.py +0 -0
- {uht_tooling-0.1.5 → uht_tooling-0.1.6}/src/uht_tooling/workflows/umi_hunter.py +0 -0
- {uht_tooling-0.1.5 → uht_tooling-0.1.6}/src/uht_tooling.egg-info/SOURCES.txt +0 -0
- {uht_tooling-0.1.5 → uht_tooling-0.1.6}/src/uht_tooling.egg-info/dependency_links.txt +0 -0
- {uht_tooling-0.1.5 → uht_tooling-0.1.6}/src/uht_tooling.egg-info/entry_points.txt +0 -0
- {uht_tooling-0.1.5 → uht_tooling-0.1.6}/src/uht_tooling.egg-info/top_level.txt +0 -0
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Metadata-Version: 2.4
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Name: uht-tooling
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Version: 0.1.
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Version: 0.1.6
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Summary: Tooling for ultra-high throughput screening workflows.
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Author: Matt115A
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License: MIT
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Requires-Dist: tabulate==0.9.0
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Requires-Dist: tqdm==4.67.1
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Requires-Dist: typer==0.20.0
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Requires-Dist: mappy==2.30
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Provides-Extra: gui
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Requires-Dist: gradio==5.49.1; extra == "gui"
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Provides-Extra: dev
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### Quick install (recommended, easiest file maintainance)
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```bash
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pip install "uht-tooling[gui]
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pip install "uht-tooling[gui]"
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```
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This installs the core workflows plus the optional GUI
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This installs the core workflows plus the optional GUI dependency (Gradio). Omit the `[gui]` extras if you only need the CLI:
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```bash
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pip install uht-tooling
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```
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You will need a functioning version of mafft - you should install this separately and it should be accessible from your environment.
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### Development install
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```bash
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git clone https://github.com/Matt115A/uht-tooling-packaged.git
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### Quick install (recommended, easiest file maintainance)
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```bash
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pip install "uht-tooling[gui]
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pip install "uht-tooling[gui]"
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```
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-
This installs the core workflows plus the optional GUI
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This installs the core workflows plus the optional GUI dependency (Gradio). Omit the `[gui]` extras if you only need the CLI:
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```bash
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pip install uht-tooling
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```
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You will need a functioning version of mafft - you should install this separately and it should be accessible from your environment.
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### Development install
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```bash
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git clone https://github.com/Matt115A/uht-tooling-packaged.git
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[project]
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name = "uht-tooling"
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version = "0.1.
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version = "0.1.6"
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description = "Tooling for ultra-high throughput screening workflows."
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readme = "README.md"
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requires-python = ">=3.8"
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"tabulate==0.9.0",
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"tqdm==4.67.1",
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"typer==0.20.0",
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"mappy==2.30",
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]
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[project.optional-dependencies]
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Metadata-Version: 2.4
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Name: uht-tooling
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Version: 0.1.
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Version: 0.1.6
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Summary: Tooling for ultra-high throughput screening workflows.
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Author: Matt115A
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License: MIT
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Requires-Dist: tabulate==0.9.0
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Requires-Dist: tqdm==4.67.1
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Requires-Dist: typer==0.20.0
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Requires-Dist: mappy==2.30
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Provides-Extra: gui
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Requires-Dist: gradio==5.49.1; extra == "gui"
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Provides-Extra: dev
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@@ -35,16 +36,18 @@ Automation helpers for ultra-high-throughput molecular biology workflows. The pa
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### Quick install (recommended, easiest file maintainance)
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```bash
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pip install "uht-tooling[gui]
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pip install "uht-tooling[gui]"
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```
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-
This installs the core workflows plus the optional GUI
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This installs the core workflows plus the optional GUI dependency (Gradio). Omit the `[gui]` extras if you only need the CLI:
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```bash
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pip install uht-tooling
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```
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You will need a functioning version of mafft - you should install this separately and it should be accessible from your environment.
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### Development install
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```bash
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git clone https://github.com/Matt115A/uht-tooling-packaged.git
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