tsam 2.3.6__tar.gz → 2.3.8__tar.gz

{tsam-2.3.6/src/tsam.egg-info → tsam-2.3.8}/PKG-INFO

@@ -1,6 +1,6 @@
-Metadata-Version: 2.1
+Metadata-Version: 2.4
 Name: tsam
-Version: 2.3.6
+Version: 2.3.8
 Summary: Time series aggregation module (tsam) to create typical periods
 Author-email: Leander Kotzur <leander.kotzur@googlemail.com>, Maximilian Hoffmann <maximilian.hoffmann@julumni.fz-juelich.de>
 Maintainer-email: Julian Belina <j.belina@fz-juelich.de>
@@ -37,7 +37,7 @@ Classifier: Programming Language :: Python :: 2
 Classifier: Programming Language :: Python :: 3
 Classifier: Topic :: Scientific/Engineering :: Mathematics
 Classifier: Topic :: Software Development :: Libraries :: Python Modules
-Requires-Python: <3.13,>=3.9
+Requires-Python: <3.14,>=3.9
 Description-Content-Type: text/markdown
 License-File: LICENSE.txt
 Requires-Dist: scikit-learn>=0.0
@@ -55,6 +55,7 @@ Requires-Dist: sphinx; extra == "dev"
 Requires-Dist: sphinx-autobuild; extra == "dev"
 Requires-Dist: sphinx_book_theme; extra == "dev"
 Requires-Dist: twine; extra == "dev"
+Dynamic: license-file
 
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{tsam-2.3.6 → tsam-2.3.8}/pyproject.toml

@@ -5,7 +5,7 @@ build-backend = "setuptools.build_meta"
 
 [project]
 name = "tsam"
-version = "2.3.6"
+version = "2.3.8"
 description = "Time series aggregation module (tsam) to create typical periods"
 authors = [
     { name = "Leander Kotzur", email = "leander.kotzur@googlemail.com" },
@@ -16,7 +16,7 @@ maintainers = [
 ]
 license = { file = "LICENSE.txt" }
 keywords = ["clustering", "optimization"]
-requires-python = ">=3.9,<3.13"
+requires-python = ">=3.9,<3.14"
 readme = "README.md"
 classifiers=[
         "Development Status :: 4 - Beta",

{tsam-2.3.6 → tsam-2.3.8}/requirements.yml

@@ -2,5 +2,5 @@ name: tsam_env
 channels:
   - conda-forge
 dependencies:
-  - python>=3.9,<3.13
+  - python>=3.9,<3.14
   - pip

{tsam-2.3.6 → tsam-2.3.8}/src/tsam/timeseriesaggregation.py

@@ -199,6 +199,9 @@ class TimeSeriesAggregation(object):
             differently evaluated while the clustering process. optional (default: None )
         :type weightDict: dict
 
+        :param segmentation: Boolean if time steps in periods should be aggregated to segments. optional (default: False)
+        :type segmentation: boolean
+
         :param extremePeriodMethod: Method how to integrate extreme Periods (peak demand, lowest temperature etc.)
             into to the typical period profiles. optional, default: 'None'
             |br| Options are:

{tsam-2.3.6 → tsam-2.3.8}/src/tsam/utils/durationRepresentation.py

@@ -28,69 +28,80 @@ def durationRepresentation(
     :type representMinMax: bool
     """
 
-    # make pd.DataFrame each row represents a candidate, and the columns are defined by two levels: the attributes and
-    # the time steps inside the candidates.
-    columnTuples = []
-    for i in range(int(candidates.shape[1] / timeStepsPerPeriod)):
-        for j in range(timeStepsPerPeriod):
-            columnTuples.append((i, j))
-    candidates = pd.DataFrame(
-        candidates, columns=pd.MultiIndex.from_tuples(columnTuples)
+    # Convert candidates to numpy array at the beginning if it's a DataFrame
+    if isinstance(candidates, pd.DataFrame):
+        candidates_array = candidates.values
+    else:
+        candidates_array = candidates
+    
+    # Create a pandas DataFrame only when necessary
+    columnTuples = [(i, j) for i in range(int(candidates_array.shape[1] / timeStepsPerPeriod)) 
+                   for j in range(timeStepsPerPeriod)]
+    
+    candidates_df = pd.DataFrame(
+        candidates_array, columns=pd.MultiIndex.from_tuples(columnTuples)
     )
-
-    # There are two options for the duration representation. Either, the distribution of each cluster is preserved
-    # (periodWise = True) or the distribution of the total time series is preserved only. In the latter case, the
-    # inner-cluster variance is smaller and the variance across the typical periods' mean values is higher
+    
     if distributionPeriodWise:
         clusterCenters = []
-        for clusterNum in np.unique(clusterOrder):
-            indice = np.where(clusterOrder == clusterNum)
-            noCandidates = len(indice[0])
-            clean_index = []
-
-            clusterCenter = []
-            # get a clean index depending on the size
-            for y in candidates.columns.levels[1]:
-                for x in range(noCandidates):
-                    clean_index.append((x, y))
-            for a in candidates.columns.levels[0]:
-                # get all the values of a certain attribute and cluster
-                candidateValues = candidates.loc[indice[0], a]
-                # sort all values
-                sortedAttr = candidateValues.stack(
-                    future_stack=True,
-                ).sort_values()
-                # reindex and arrange such that every sorted segment gets represented by its mean
-                sortedAttr.index = pd.MultiIndex.from_tuples(clean_index)
-                representationValues = sortedAttr.unstack(level=0).mean(axis=1)
-                # respect max and min of the attributes
+        unique_clusters = np.unique(clusterOrder)
+        
+        for clusterNum in unique_clusters:
+            indice = np.where(clusterOrder == clusterNum)[0]
+            noCandidates = len(indice)
+            
+            # Pre-allocate the full cluster center array
+            cluster_values_count = noCandidates * timeStepsPerPeriod * len(candidates_df.columns.levels[0])
+            clusterCenter = np.zeros(cluster_values_count)
+            current_idx = 0
+            
+            for a in candidates_df.columns.levels[0]:
+                # Get values using numpy indexing when possible
+                candidateValues = candidates_df.loc[indice, a].values
+                
+                # Reshape to more easily work with numpy
+                candidateValues_reshaped = candidateValues.reshape(-1)
+                
+                # Sort values using numpy
+                sorted_values = np.sort(candidateValues_reshaped)
+                
+                # Calculate representative values directly
+                values_per_timestep = noCandidates
+                representation_values = np.zeros(timeStepsPerPeriod)
+                
+                for t in range(timeStepsPerPeriod):
+                    start_idx = t * values_per_timestep
+                    end_idx = start_idx + values_per_timestep
+                    representation_values[t] = np.mean(sorted_values[start_idx:end_idx])
+                
+                # Handle min/max representation if needed
                 if representMinMax:
-                    representationValues.loc[0] = sortedAttr.values[0]
-                    representationValues.loc[representationValues.index[-1]] = (
-                        sortedAttr.values[-1]
-                    )
-
-                # get the order of the representation values such that euclidean distance to the candidates is minimized
-                order = candidateValues.mean().sort_values().index
-                # arrange
-                representationValues.index = order
-                representationValues.sort_index(inplace=True)
-
-                # add to cluster center
-                clusterCenter = np.append(clusterCenter, representationValues.values)
-
-            clusterCenters.append(clusterCenter)
-
+                    representation_values[0] = sorted_values[0]
+                    representation_values[-1] = sorted_values[-1]
+                
+                # Re-order values based on the mean of candidate values
+                mean_values = np.mean(candidateValues, axis=0)
+                order_indices = np.argsort(mean_values)
+                
+                # Reorder representation values
+                representation_values_ordered = representation_values[order_indices]
+                
+                # Add to cluster center
+                clusterCenter[current_idx:current_idx+len(representation_values)] = representation_values_ordered
+                current_idx += len(representation_values)
+                
+            clusterCenters.append(clusterCenter[:current_idx])  # Trim if we didn't use the whole pre-allocation
+    
     else:
         clusterCentersList = []
-        for a in candidates.columns.levels[0]:
+        for a in candidates_df.columns.levels[0]:
             meanVals = []
             clusterLengths = []
             for clusterNum in np.unique(clusterOrder):
                 indice = np.where(clusterOrder == clusterNum)
                 noCandidates = len(indice[0])
                 # get all the values of a certain attribute and cluster
-                candidateValues = candidates.loc[indice[0], a]
+                candidateValues = candidates_df.loc[indice[0], a]
                 # calculate centroid of each cluster and append to list
                 meanVals.append(candidateValues.mean())
                 # make a list of weights of each cluster for each time step within the period
@@ -113,7 +124,7 @@ def durationRepresentation(
             order = meansAndWeightsSorted.index
             # sort all values of the original time series
             sortedAttr = (
-                candidates.loc[:, a]
+                candidates_df.loc[:, a]
                 .stack(
                     future_stack=True,
                 )

{tsam-2.3.6 → tsam-2.3.8/src/tsam.egg-info}/PKG-INFO

@@ -1,6 +1,6 @@
-Metadata-Version: 2.1
+Metadata-Version: 2.4
 Name: tsam
-Version: 2.3.6
+Version: 2.3.8
 Summary: Time series aggregation module (tsam) to create typical periods
 Author-email: Leander Kotzur <leander.kotzur@googlemail.com>, Maximilian Hoffmann <maximilian.hoffmann@julumni.fz-juelich.de>
 Maintainer-email: Julian Belina <j.belina@fz-juelich.de>
@@ -37,7 +37,7 @@ Classifier: Programming Language :: Python :: 2
 Classifier: Programming Language :: Python :: 3
 Classifier: Topic :: Scientific/Engineering :: Mathematics
 Classifier: Topic :: Software Development :: Libraries :: Python Modules
-Requires-Python: <3.13,>=3.9
+Requires-Python: <3.14,>=3.9
 Description-Content-Type: text/markdown
 License-File: LICENSE.txt
 Requires-Dist: scikit-learn>=0.0
@@ -55,6 +55,7 @@ Requires-Dist: sphinx; extra == "dev"
 Requires-Dist: sphinx-autobuild; extra == "dev"
 Requires-Dist: sphinx_book_theme; extra == "dev"
 Requires-Dist: twine; extra == "dev"
+Dynamic: license-file
 
 [![daily pytest](https://github.com/FZJ-IEK3-VSA/tsam/actions/workflows/daily_tests.yml/badge.svg?branch=master)](https://github.com/FZJ-IEK3-VSA/tsam/actions) [![Version](https://img.shields.io/pypi/v/tsam.svg)](https://pypi.python.org/pypi/tsam) [![Conda Version](https://img.shields.io/conda/vn/conda-forge/tsam.svg)](https://anaconda.org/conda-forge/tsam) [![Documentation Status](https://readthedocs.org/projects/tsam/badge/?version=latest)](https://tsam.readthedocs.io/en/latest/) [![PyPI - License](https://img.shields.io/pypi/l/tsam)]((https://github.com/FZJ-IEK3-VSA/tsam/blob/master/LICENSE.txt)) [![codecov](https://codecov.io/gh/FZJ-IEK3-VSA/tsam/branch/master/graph/badge.svg)](https://codecov.io/gh/FZJ-IEK3-VSA/tsam)
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{tsam-2.3.6 → tsam-2.3.8}/test/test_assert_raises.py

@@ -18,7 +18,7 @@ def test_assert_raises():
     # check error message for wrong time series
     np.testing.assert_raises_regex(
         ValueError,
-        "timeSeries has to be of type pandas.DataFrame\(\) or of type np.array\(\) in "
+        r"timeSeries has to be of type pandas.DataFrame\(\) or of type np.array\(\) in "
         "initialization of object of class TimeSeriesAggregation",
         tsam.TimeSeriesAggregation,
         timeSeries="erroneousTimeSeries",
@@ -126,8 +126,8 @@ def test_assert_raises():
     # check erroneous clusterMethod argument
     np.testing.assert_raises_regex(
         ValueError,
-        "clusterMethod needs to be one of the following: \['averaging', 'k_means', "
-        "'k_medoids', 'k_maxoids', 'hierarchical', 'adjacent_periods'\]",
+        r"clusterMethod needs to be one of the following: \['averaging', 'k_means', "
+        r"'k_medoids', 'k_maxoids', 'hierarchical', 'adjacent_periods'\]",
         tsam.TimeSeriesAggregation,
         timeSeries=raw,
         clusterMethod="erroneousClusterMethod",
@@ -144,8 +144,8 @@ def test_assert_raises():
     # check erroneous extremePeriodMethod argument
     np.testing.assert_raises_regex(
         ValueError,
-        "extremePeriodMethod needs to be one of the following: \['None', 'append', "
-        "'new_cluster_center', 'replace_cluster_center'\]",
+        r"extremePeriodMethod needs to be one of the following: \['None', 'append', "
+        r"'new_cluster_center', 'replace_cluster_center'\]",
         tsam.TimeSeriesAggregation,
         timeSeries=raw,
         extremePeriodMethod="erroneousExtremePeriodMethod",