topmark 0.3.2__tar.gz → 0.5.0__tar.gz

{topmark-0.3.2/src/topmark.egg-info → topmark-0.5.0}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: topmark
-Version: 0.3.2
+Version: 0.5.0
 Summary: A Python CLI to inspect, validate, and manage license and copyright headers.
 Author-email: Olivier Biot <olivier.biot@gmail.com>
 License-Expression: MIT
@@ -97,6 +97,7 @@ concise landing page and deep links into topics (install, usage, CI, API, etc.).
 - Full header removal (`topmark strip`)
 - Preserves original newline style (LF/CRLF/CR) and BOM
 - Idempotent updates (re-running does not change already-correct files)
+- Structured diagnostics with severity levels (`info`, `warning`, `error`) and aggregate counts
 
 ## 🚀 Installation
 
@@ -120,19 +121,24 @@ pip install topmark
 
 ## ⚙️ Usage
 
+> **Note**: In dry-run mode, TopMark shows summaries ending with `- previewed`. When run with `--apply`, summaries end with terminal statuses such as `- inserted`, `- replaced`, or `- removed`.
+
 ```bash
 topmark [SUBCOMMAND] [OPTIONS] [PATHS]...
 ```
 
-TopMark uses Click 8.2 and supports shell completions. The base command performs a dry‑run *check*
-by default and applies changes when `--apply` is provided.
-
-The `strip` subcommand is provided to remove entire headers.
+The `check` and `strip` commands performs a dry‑run by default
+and will only apply changes when `--apply` is provided.
 
 Logging verbosity is controlled globally:
 
-- `-v`, `--verbose`: Increase verbosity (can be repeated)
-- `-q`, `--quiet`: Suppress most output (overrides verbosity)
+CLI verbosity has two layers:
+
+- **Program output** (user-facing):
+  - `-v`, `--verbose`: Show more detail, including per-line diagnostics in summaries.
+  - `-q`, `--quiet`: Suppress most output (overrides `-v`).
+- **Internal logging** (developer/machine):
+  - Also mapped by `-v`/`-q`, controls log level (`DEBUG` / `INFO` / `WARNING` / `ERROR`).
 
 All other options are specific to individual subcommands.
 
@@ -142,6 +148,7 @@ ______________________________________________________________________
 
 | Command         | Description                                        |
 | --------------- | -------------------------------------------------- |
+| `check`         | Add / Update TopMark headers in files              |
 | `dump-config`   | Show the resolved configuration in TOML format     |
 | `filetypes`     | List supported file types and their comment styles |
 | `processors`    | List registered header processors and file types   |
@@ -171,10 +178,10 @@ find . -name "*.py" | topmark check --file-type python --files-from -  --summary
 git ls-files -c -o --exclude-standard | sort -u | topmark check --files-from - --apply
 
 # Read a single file's *content* from STDIN and render the resultng unified diff
-cat README.md | topmark - --stdin-filename README.md --diff
+cat README.md | topmark check - --stdin-filename README.md --diff
 
 # Read a single file's *content* from STDIN and print the updated content to stdout
-cat README.md | topmark - --stdin-filename README.md --apply
+cat README.md | topmark check - --stdin-filename README.md --apply
 
 # Dump the merged configuration (after loading all applicable config layers)
 topmark dump-config --file-type python --exclude .venv --exclude-from .gitignore
@@ -200,8 +207,8 @@ topmark strip --apply src/
 # CI-friendly summary: only show issues; ignore unsupported types
 topmark check --skip-compliant --skip-unsupported src/
 
-# Apply fixes, don't report unsupported files, muted output (useful for pre-commit)
-topmark check --apply --skip-unsupported --quiet
+# Apply fixes, don't report unsupported files; default output is terse (pre-commit friendly)
+topmark check --apply --skip-unsupported
 
 # Show supported file types in MarkDown format, providing detailed output:
 topmark filetypes --format markdown --long
@@ -274,7 +281,7 @@ declaration for XML/HTML, etc.). Newline style and BOM are preserved; runs are i
 
 ```bash
 # Preview (exit code 2 when changes are pending)
-topmark src/
+topmark check src/
 
 # Apply in place
 topmark check --apply src/

{topmark-0.3.2 → topmark-0.5.0}/README.md

@@ -47,6 +47,7 @@ concise landing page and deep links into topics (install, usage, CI, API, etc.).
 - Full header removal (`topmark strip`)
 - Preserves original newline style (LF/CRLF/CR) and BOM
 - Idempotent updates (re-running does not change already-correct files)
+- Structured diagnostics with severity levels (`info`, `warning`, `error`) and aggregate counts
 
 ## 🚀 Installation
 
@@ -70,19 +71,24 @@ pip install topmark
 
 ## ⚙️ Usage
 
+> **Note**: In dry-run mode, TopMark shows summaries ending with `- previewed`. When run with `--apply`, summaries end with terminal statuses such as `- inserted`, `- replaced`, or `- removed`.
+
 ```bash
 topmark [SUBCOMMAND] [OPTIONS] [PATHS]...
 ```
 
-TopMark uses Click 8.2 and supports shell completions. The base command performs a dry‑run *check*
-by default and applies changes when `--apply` is provided.
-
-The `strip` subcommand is provided to remove entire headers.
+The `check` and `strip` commands performs a dry‑run by default
+and will only apply changes when `--apply` is provided.
 
 Logging verbosity is controlled globally:
 
-- `-v`, `--verbose`: Increase verbosity (can be repeated)
-- `-q`, `--quiet`: Suppress most output (overrides verbosity)
+CLI verbosity has two layers:
+
+- **Program output** (user-facing):
+  - `-v`, `--verbose`: Show more detail, including per-line diagnostics in summaries.
+  - `-q`, `--quiet`: Suppress most output (overrides `-v`).
+- **Internal logging** (developer/machine):
+  - Also mapped by `-v`/`-q`, controls log level (`DEBUG` / `INFO` / `WARNING` / `ERROR`).
 
 All other options are specific to individual subcommands.
 
@@ -92,6 +98,7 @@ ______________________________________________________________________
 
 | Command         | Description                                        |
 | --------------- | -------------------------------------------------- |
+| `check`         | Add / Update TopMark headers in files              |
 | `dump-config`   | Show the resolved configuration in TOML format     |
 | `filetypes`     | List supported file types and their comment styles |
 | `processors`    | List registered header processors and file types   |
@@ -121,10 +128,10 @@ find . -name "*.py" | topmark check --file-type python --files-from -  --summary
 git ls-files -c -o --exclude-standard | sort -u | topmark check --files-from - --apply
 
 # Read a single file's *content* from STDIN and render the resultng unified diff
-cat README.md | topmark - --stdin-filename README.md --diff
+cat README.md | topmark check - --stdin-filename README.md --diff
 
 # Read a single file's *content* from STDIN and print the updated content to stdout
-cat README.md | topmark - --stdin-filename README.md --apply
+cat README.md | topmark check - --stdin-filename README.md --apply
 
 # Dump the merged configuration (after loading all applicable config layers)
 topmark dump-config --file-type python --exclude .venv --exclude-from .gitignore
@@ -150,8 +157,8 @@ topmark strip --apply src/
 # CI-friendly summary: only show issues; ignore unsupported types
 topmark check --skip-compliant --skip-unsupported src/
 
-# Apply fixes, don't report unsupported files, muted output (useful for pre-commit)
-topmark check --apply --skip-unsupported --quiet
+# Apply fixes, don't report unsupported files; default output is terse (pre-commit friendly)
+topmark check --apply --skip-unsupported
 
 # Show supported file types in MarkDown format, providing detailed output:
 topmark filetypes --format markdown --long
@@ -224,7 +231,7 @@ declaration for XML/HTML, etc.). Newline style and BOM are preserved; runs are i
 
 ```bash
 # Preview (exit code 2 when changes are pending)
-topmark src/
+topmark check src/
 
 # Apply in place
 topmark check --apply src/

{topmark-0.3.2 → topmark-0.5.0}/pyproject.toml

@@ -10,7 +10,7 @@
 
 [project]
 name = "topmark"
-version = "0.3.2"
+version = "0.5.0"
 description = "A Python CLI to inspect, validate, and manage license and copyright headers."
 authors = [{ name = "Olivier Biot", email = "olivier.biot@gmail.com" }]
 license = "MIT"
@@ -113,15 +113,6 @@ include-package-data = true
 [tool.setuptools.packages.find]
 where = ["src"]
 
-# Markdown formatting configuration (normative reference: .mdformat.toml)
-# Aligns with Prettier in VS Code and the mdformat pre-commit hook
-[tool.mdformat]
-wrap = 100
-extensions = ["tables"]
-# Exclude auto-generated API page from formatting (Python 3.13)
-# NOTE: Please use `make format-check` and `make format`
-exclude = ["docs/api/public.md"]
-
 
 # TOML formatting
 [tool.taplo.format]

{topmark-0.3.2 → topmark-0.5.0}/src/topmark/api/__init__.py

@@ -34,12 +34,11 @@ Notes:
 - A FileType instance is **recognized** if it is in the FileTypeRegistry.
 - A FileType instance is **supported** if it is recognized and is registered to
   a HeaderProcessor instance in the HeaderProcessorRegistry.
+- The API returns per-file diagnostics and aggregate counts; levels are "info", "warning", "error".
 """
 
 from __future__ import annotations
 
-import logging
-import os
 from pathlib import Path
 from typing import Any, Iterable, Mapping, Sequence
 
@@ -50,15 +49,18 @@ from topmark.cli.cmd_common import (
 from topmark.cli.io import InputPlan
 from topmark.cli_shared.utils import write_updates
 from topmark.config import Config
-from topmark.config.logging import get_logger, setup_logging
+from topmark.config.logging import get_logger
 from topmark.constants import TOPMARK_VERSION
-from topmark.pipeline.context import ComparisonStatus, FileStatus, ProcessingContext, WriteStatus
+from topmark.pipeline.context import (
+    ComparisonStatus,
+    FileStatus,
+    ProcessingContext,
+    WriteStatus,
+)
 from topmark.registry import Registry
 
-from .types import FileResult, FileTypeInfo, Outcome, ProcessorInfo, RunResult
-
-if "TOPMARK_DEBUG" in os.environ:
-    setup_logging(level=logging.DEBUG)
+from .public_types import PublicDiagnostic
+from .types import DiagnosticTotals, FileResult, FileTypeInfo, Outcome, ProcessorInfo, RunResult
 
 logger = get_logger(__name__)
 
@@ -75,6 +77,7 @@ __all__ = [
     "get_filetype_info",
     "get_processor_info",
     "Registry",
+    "PublicDiagnostic",
 ]
 
 
@@ -153,6 +156,7 @@ def _run_pipeline(
     paths: Iterable[Path | str],
     base_config: Mapping[str, Any] | Config | None,
     file_types: Sequence[str] | None,
+    apply_changes: bool,
 ) -> tuple[Config, list[Path], list[ProcessingContext], object | None]:
     """Resolve config + files, register processors, and run the pipeline.
 
@@ -168,6 +172,10 @@ def _run_pipeline(
     cfg, file_list = _build_cfg_and_files_via_cli_helpers(
         paths, base_config=base_config, file_types=file_types
     )
+
+    # Set the 'apply' mode in the Config instance
+    cfg.apply_changes = apply_changes
+
     if not file_list:
         return cfg, file_list, [], None
 
@@ -200,24 +208,45 @@ def _apply_view_filter(
     return view_results, skipped
 
 
-def _collect_diagnostics(results: list[ProcessingContext]) -> dict[str, list[str]]:
-    """Collect per-file diagnostics as a mapping `{path: [messages...]}`.
-
-    Only files that produced diagnostics are included in the result.
-
-    Args:
-        results: List of ProcessingContext results.
+def _collect_diagnostics(
+    results: list[ProcessingContext],
+) -> dict[str, list[PublicDiagnostic]]:
+    """Collect per-file diagnostics as a mapping `{path: [diagnostics...]}`.
 
-    Returns:
-        A mapping from file path (string) to a list of diagnostic messages.
+    Diagnostics are returned in the *public* JSON-friendly shape and do not
+    expose internal classes or enums.
     """
-    diags: dict[str, list[str]] = {}
+    diags: dict[str, list[PublicDiagnostic]] = {}
     for r in results:
         if r.diagnostics:
-            diags[str(r.path)] = r.diagnostics
+            diags[str(r.path)] = [
+                {"level": d.level.value, "message": d.message} for d in r.diagnostics
+            ]
     return diags
 
 
+def _collect_diagnostic_totals(results: list[ProcessingContext]) -> DiagnosticTotals:
+    """Return aggregate counts of diagnostics across the given results.
+
+    Counts reflect only the supplied `results` (typically the **view** after
+    filtering), matching what is returned to the caller.
+    """
+    total_info = total_warn = total_error = 0
+    for r in results:
+        if not r.diagnostics:
+            continue
+        for d in r.diagnostics:
+            lv = d.level.value
+            if lv == "info":
+                total_info += 1
+            elif lv == "warning":
+                total_warn += 1
+            elif lv == "error":
+                total_error += 1
+    total = total_info + total_warn + total_error
+    return {"info": total_info, "warning": total_warn, "error": total_error, "total": total}
+
+
 # ---------- public API ----------
 
 
@@ -269,7 +298,7 @@ def _build_cfg_and_files_via_cli_helpers(
     # but without relying on Click. We construct the ArgsNamespace-equivalent
     # mapping that `Config.load_merged()` expects.
     args_mapping = {
-        "log_level": logging.WARNING,
+        "verbosity_level": None,  # inherit program-output verbosity (tri-state)
         "files": list(plan.paths),
         "files_from": list(plan.files_from),
         "stdin": False,
@@ -340,6 +369,7 @@ def check(
         paths=paths,
         base_config=config,
         file_types=file_types,
+        apply_changes=apply,
     )
     if not file_list:
         return RunResult(files=(), summary={}, had_errors=False)
@@ -354,6 +384,8 @@ def check(
         encountered_error_code is not None
     )
     diagnostics = _collect_diagnostics(view_results)
+    diagnostic_totals = _collect_diagnostic_totals(view_results)
+    diagnostic_totals_all = _collect_diagnostic_totals(results)
 
     written = failed = 0
     if apply:
@@ -380,6 +412,8 @@ def check(
         written=written,
         failed=failed,
         diagnostics=diagnostics,
+        diagnostic_totals=diagnostic_totals,
+        diagnostic_totals_all=diagnostic_totals_all,
     )
 
 
@@ -418,6 +452,7 @@ def strip(
         paths=paths,
         base_config=config,
         file_types=file_types,
+        apply_changes=apply,
     )
     if not file_list:
         return RunResult(files=(), summary={}, had_errors=False)
@@ -432,6 +467,8 @@ def strip(
         encountered_error_code is not None
     )
     diagnostics = _collect_diagnostics(view_results)
+    diagnostic_totals = _collect_diagnostic_totals(view_results)
+    diagnostic_totals_all = _collect_diagnostic_totals(results)
 
     written = failed = 0
     if apply:
@@ -452,6 +489,8 @@ def strip(
         written=written,
         failed=failed,
         diagnostics=diagnostics,
+        diagnostic_totals=diagnostic_totals,
+        diagnostic_totals_all=diagnostic_totals_all,
     )
 
 

{topmark-0.3.2 → topmark-0.5.0}/src/topmark/api/public_types.py

@@ -21,11 +21,17 @@ Notes:
     * Attribute names and types here are part of the public API and follow
       semver. Adding optional attributes is allowed in minor versions; removing
       or changing types is a breaking change.
+
+Diagnostics
+-----------
+The public API uses JSON-friendly diagnostics with string literal severities.
+See :class:`PublicDiagnostic` for the shape and :data:`DiagnosticLevelLiteral`
+for the allowed values.
 """
 
 from __future__ import annotations
 
-from typing import TYPE_CHECKING, Protocol, Sequence
+from typing import TYPE_CHECKING, Literal, Protocol, Sequence, TypedDict
 
 if TYPE_CHECKING:
     from collections.abc import Callable
@@ -96,3 +102,20 @@ class PublicHeaderProcessor(Protocol):
     block_suffix: str
     # registry binds at runtime
     file_type: PublicFileType
+
+
+"""Allowed diagnostic severity levels in the public API."""
+DiagnosticLevelLiteral = Literal["info", "warning", "error"]
+
+
+class PublicDiagnostic(TypedDict):
+    """Stable, JSON-friendly diagnostic for API consumers.
+
+    Notes:
+        * Uses string literal levels for semver stability and easy serialization.
+        * Mirrors internal pipeline diagnostics but does not expose internals.
+        * This shape is stable for semver and safe to serialize to JSON/NDJSON.
+    """
+
+    level: DiagnosticLevelLiteral
+    message: str

{topmark-0.3.2 → topmark-0.5.0}/src/topmark/api/types.py

@@ -21,9 +21,28 @@ from dataclasses import dataclass
 from enum import Enum
 from typing import TYPE_CHECKING, Mapping, Sequence, TypedDict
 
+
+class DiagnosticTotals(TypedDict):
+    """Aggregate diagnostic counts across the returned *view*.
+
+    Keys:
+        info: Number of info diagnostics.
+        warning: Number of warning diagnostics.
+        error: Number of error diagnostics.
+        total: Sum of all diagnostics.
+    """
+
+    info: int
+    warning: int
+    error: int
+    total: int
+
+
 if TYPE_CHECKING:
     from pathlib import Path
 
+    from .public_types import PublicDiagnostic
+
 
 class Outcome(str, Enum):
     """Per-file outcome bucket.
@@ -72,8 +91,11 @@ class RunResult:
         skipped: Number of items removed by view filters (e.g., `skip_compliant`).
         written: Number of files successfully written (only in apply mode; otherwise 0).
         failed: Number of files that failed to write (only in apply mode; otherwise 0).
-        diagnostics: Optional mapping from file path (string) to a list of pipeline
-            diagnostic messages; present only if any were produced.
+        diagnostics: Optional mapping from file path to a list of public diagnostics.
+        diagnostic_totals: Optional aggregate counts across the **returned view**
+            (not the entire run).
+        diagnostic_totals_all: Optional aggregate counts across the **entire run**
+            (pre view filtering).
     """
 
     files: Sequence[FileResult]
@@ -82,7 +104,9 @@ class RunResult:
     skipped: int = 0
     written: int = 0
     failed: int = 0
-    diagnostics: dict[str, list[str]] | None = None
+    diagnostics: dict[str, list[PublicDiagnostic]] | None = None
+    diagnostic_totals: DiagnosticTotals | None = None
+    diagnostic_totals_all: DiagnosticTotals | None = None
 
 
 # Tiny intent object used by check()/strip() to gate writes

{topmark-0.3.2 → topmark-0.5.0}/src/topmark/cli/cli_types.py

@@ -19,7 +19,6 @@ across all TopMark commands and subcommands.
 """
 
 import glob
-import logging
 from enum import Enum
 from pathlib import Path
 from typing import (
@@ -63,7 +62,8 @@ class ArgsNamespace(TypedDict, total=False):
     file overrides, file selection, filtering, and formatting flags.
 
     Attributes:
-        log_level: Verbosity level for logging.
+        verbosity_level: Program-output verbosity (0=terse, 1=verbose).
+        apply_changes: Whether to apply the changed (dry-run if not set ot False).
         no_config: Whether to ignore local config files.
         config_files: List of extra config file paths.
         files: List of file paths to process.
@@ -79,10 +79,11 @@ class ArgsNamespace(TypedDict, total=False):
     """
 
     # Global options: retrieve from ctx.obj
-    log_level: int
+    verbosity_level: int | None
 
-    # TopMark Command
-    # command: TopMarkCommand
+    # Runtime intent: whether to actually write changes (apply) or preview only
+    # None = inherit/unspecified, False = dry-run/preview, True = apply
+    apply_changes: bool | None
 
     # Command options: config
     no_config: bool | None
@@ -108,8 +109,8 @@ class ArgsNamespace(TypedDict, total=False):
 
 def build_args_namespace(
     *,
-    log_level: int = logging.WARNING,
-    # command: TopMarkCommand = TopMarkCommand.NONE,
+    verbosity_level: int | None = None,
+    apply_changes: bool | None = None,
     no_config: bool | None = None,
     config_files: list[str] | None = None,
     files: list[str] | None = None,
@@ -127,7 +128,8 @@ def build_args_namespace(
     """Build an ArgsNamespace dictionary for CLI argument passing.
 
     Args:
-        log_level: Verbosity level for logging.
+        verbosity_level: Program-output verbosity (0=terse, 1=verbose).
+        apply_changes: Whether to apply the changed (dry-run if not set ot False).
         no_config: Whether to ignore local config files.
         config_files: List of extra config file paths.
         files: List of file paths to process.
@@ -146,8 +148,8 @@ def build_args_namespace(
         Dictionary of CLI argument values for use throughout the CLI.
     """
     return {
-        "log_level": log_level,
-        # "command": command,
+        "verbosity_level": verbosity_level,
+        "apply_changes": apply_changes,
         "no_config": no_config,
         "config_files": config_files,
         "files": files if files is not None else [],

{topmark-0.3.2 → topmark-0.5.0}/src/topmark/cli/cmd_common.py

@@ -23,6 +23,7 @@ from typing import TYPE_CHECKING
 import click
 
 from topmark.cli.config_resolver import resolve_config_from_click
+from topmark.cli.console_helpers import get_console_safely
 from topmark.cli_shared.exit_codes import ExitCode
 from topmark.config.logging import get_logger
 from topmark.file_resolver import resolve_file_list
@@ -38,6 +39,20 @@ if TYPE_CHECKING:
 logger = get_logger(__name__)
 
 
+def get_effective_verbosity(ctx: click.Context, config: "Config | None" = None) -> int:
+    """Return the effective program-output verbosity for this command.
+
+    Resolution order (tri-state aware):
+        1. Config.verbosity_level if set (not None)
+        2. ctx.obj["verbosity_level"] if present
+        3. 0 (terse)
+    """
+    cfg_level = getattr(config, "verbosity_level", None) if config else None
+    if cfg_level is not None:
+        return int(cfg_level)
+    return int(ctx.obj.get("verbosity_level", 0))
+
+
 def build_file_list(config: Config, *, stdin_mode: bool, temp_path: Path | None) -> list[Path]:
     """Return the files to process, respecting STDIN content mode.
 
@@ -67,6 +82,7 @@ def run_steps_for_files(
         ENCODING_ERROR → UnicodeDecodeError
         PIPELINE_ERROR → any other unexpected exception
     """
+    console = get_console_safely()
     steps = get_pipeline(pipeline_name)
     results: list[ProcessingContext] = []
     encountered_error_code: ExitCode | None = None
@@ -78,7 +94,7 @@ def run_steps_for_files(
             results.append(ctx_obj)
         except (FileNotFoundError, PermissionError, IsADirectoryError) as e:
             logger.error("Filesystem error while processing %s: %s", path, e)
-            click.secho(f"❌ Filesystem error processing {path}: {e}", fg="red")
+            console.error(f"❌ Filesystem error processing {path}: {e}")
             if isinstance(e, (FileNotFoundError, IsADirectoryError)):
                 logger.error("%s: %s", e, path)
                 encountered_error_code = encountered_error_code or ExitCode.FILE_NOT_FOUND
@@ -88,14 +104,12 @@ def run_steps_for_files(
             continue
         except UnicodeDecodeError as e:
             logger.error("Encoding error while reading %s: %s", path, e)
-            click.secho(f"🧵 Encoding error in {path}: {e}", fg="red")
+            console.error(f"🧵 Encoding error in {path}: {e}")
             encountered_error_code = encountered_error_code or ExitCode.ENCODING_ERROR
             continue
         except Exception as e:  # pragma: no cover
             logger.exception("Unexpected error processing %s", path)
-            click.secho(
-                f"⚠️  Unexpected error processing {path}: {e} (use -vv for traceback)", fg="red"
-            )
+            console.error(f"⚠️  Unexpected error processing {path}: {e} (use -vv for traceback)")
             encountered_error_code = encountered_error_code or ExitCode.PIPELINE_ERROR
             continue
 
@@ -134,7 +148,8 @@ def filter_view_results(
 def exit_if_no_files(file_list: list[Path]) -> bool:
     """Echo a friendly message and return True if there is nothing to process."""
     if not file_list:
-        click.secho("\nℹ️  No files to process.\n", fg="blue")
+        console = get_console_safely()
+        console.print(console.styled("\nℹ️  No files to process.\n", fg="blue"))
         return True
     return False
 
@@ -162,6 +177,8 @@ def build_config_common(
     """Materialize Config from an input plan (no file list resolution)."""
     return resolve_config_from_click(
         ctx=ctx,
+        verbosity_level=ctx.obj.get("verbosity_level"),
+        apply_changes=ctx.obj.get("apply_changes"),
         files=plan.paths,
         files_from=plan.files_from,
         stdin=plan.stdin_mode,
@@ -193,6 +210,8 @@ def build_config_and_file_list(
     if plan.stdin_mode:
         config = resolve_config_from_click(
             ctx=ctx,
+            verbosity_level=ctx.obj.get("verbosity_level"),
+            apply_changes=ctx.obj.get("apply_changes"),
             files=plan.paths,
             files_from=plan.files_from,
             stdin=True,
@@ -211,6 +230,8 @@ def build_config_and_file_list(
     else:
         config = resolve_config_from_click(
             ctx=ctx,
+            verbosity_level=ctx.obj.get("verbosity_level"),
+            apply_changes=ctx.obj.get("apply_changes"),
             files=plan.paths,
             files_from=plan.files_from,
             stdin=False,