toolviper 0.0.1__tar.gz

toolviper-0.0.1/LICENSE

@@ -0,0 +1,28 @@
+BSD 3-Clause License
+
+Copyright (c) 2024, CASA
+
+Redistribution and use in source and binary forms, with or without
+modification, are permitted provided that the following conditions are met:
+
+1. Redistributions of source code must retain the above copyright notice, this
+   list of conditions and the following disclaimer.
+
+2. Redistributions in binary form must reproduce the above copyright notice,
+   this list of conditions and the following disclaimer in the documentation
+   and/or other materials provided with the distribution.
+
+3. Neither the name of the copyright holder nor the names of its
+   contributors may be used to endorse or promote products derived from
+   this software without specific prior written permission.
+
+THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
+DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
+FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
+DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
+SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
+CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
+OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
+OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

toolviper-0.0.1/MANIFEST.in

@@ -0,0 +1,8 @@
+include README.md
+include MANIFEST.in
+include LICENSE
+include CONTRIBUTOR_LICENSING_AGREEMENT
+
+recursive-include src/toolviper/utils/data *
+recursive-include src/toolviper/utils/data/.dropbox *
+recursive-include src/toolviper/config *

toolviper-0.0.1/PKG-INFO

@@ -0,0 +1,70 @@
+Metadata-Version: 2.1
+Name: toolviper
+Version: 0.0.1
+Author-email: Joshua Hoskins <jhoskins@nrao.edu>, Jan Willem-Steeb <jsteeb@nrao.edu>
+License: BSD 3-Clause License
+        
+        Copyright (c) 2024, CASA
+        
+        Redistribution and use in source and binary forms, with or without
+        modification, are permitted provided that the following conditions are met:
+        
+        1. Redistributions of source code must retain the above copyright notice, this
+           list of conditions and the following disclaimer.
+        
+        2. Redistributions in binary form must reproduce the above copyright notice,
+           this list of conditions and the following disclaimer in the documentation
+           and/or other materials provided with the distribution.
+        
+        3. Neither the name of the copyright holder nor the names of its
+           contributors may be used to endorse or promote products derived from
+           this software without specific prior written permission.
+        
+        THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+        AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+        IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
+        DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
+        FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
+        DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
+        SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
+        CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
+        OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
+        OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+        
+Requires-Python: <3.13,>=3.9
+Description-Content-Type: text/markdown
+License-File: LICENSE
+Requires-Dist: cerberus
+Requires-Dist: dask
+Requires-Dist: dask_jobqueue
+Requires-Dist: distributed
+Requires-Dist: numba>=0.57.0
+Requires-Dist: numpy
+Requires-Dist: psutil
+Requires-Dist: ipywidgets
+Requires-Dist: pytest
+Requires-Dist: pytest-cov
+Requires-Dist: pytest-html
+Requires-Dist: rich
+Requires-Dist: tqdm
+Requires-Dist: zarr
+Requires-Dist: bokeh
+Requires-Dist: jupyterlab
+Requires-Dist: pyarrow
+Requires-Dist: graphviz
+Provides-Extra: docs
+Requires-Dist: ipykernel; extra == "docs"
+Requires-Dist: ipympl; extra == "docs"
+Requires-Dist: ipython; extra == "docs"
+Requires-Dist: jupyter-client; extra == "docs"
+Requires-Dist: nbsphinx; extra == "docs"
+Requires-Dist: recommonmark; extra == "docs"
+Requires-Dist: scanpydoc; extra == "docs"
+Requires-Dist: sphinx-autoapi; extra == "docs"
+Requires-Dist: sphinx-autosummary-accessors; extra == "docs"
+Requires-Dist: sphinx_rtd_theme; extra == "docs"
+Requires-Dist: twine; extra == "docs"
+Requires-Dist: pandoc; extra == "docs"
+
+# toolviper
+Tools and utilities for otimized radio astronomy processing using the VIPER framework.

toolviper-0.0.1/README.md

@@ -0,0 +1,2 @@
+# toolviper
+Tools and utilities for otimized radio astronomy processing using the VIPER framework.

toolviper-0.0.1/pyproject.toml

@@ -0,0 +1,49 @@
+[project]
+name = "toolviper"
+version = "0.0.1"
+description = ""
+authors = [
+    {name = "Joshua Hoskins", email="jhoskins@nrao.edu"},
+    {name = "Jan Willem-Steeb", email="jsteeb@nrao.edu"}
+]
+license = {file = "LICENSE"}
+readme = "README.md"
+requires-python = ">= 3.9, < 3.13"
+
+dependencies = [
+    'cerberus',
+    'dask',
+    'dask_jobqueue',
+    'distributed',
+    'numba>=0.57.0',
+    'numpy',
+    'psutil',
+    'ipywidgets',
+    'pytest',
+    'pytest-cov',
+    'pytest-html',
+    'rich',
+    'tqdm',
+    'zarr',
+    'bokeh',
+    'jupyterlab',
+    'pyarrow',
+    'graphviz',
+]
+
+
+[project.optional-dependencies]
+docs = [
+    'ipykernel',
+    'ipympl',
+    'ipython',
+    'jupyter-client',
+    'nbsphinx',
+    'recommonmark',
+    'scanpydoc',
+    'sphinx-autoapi',
+    'sphinx-autosummary-accessors',
+    'sphinx_rtd_theme',
+    'twine',
+    'pandoc'
+]

toolviper-0.0.1/setup.cfg

@@ -0,0 +1,4 @@
+[egg_info]
+tag_build = 
+tag_date = 0
+

toolviper-0.0.1/src/toolviper/__init__.py

@@ -0,0 +1,17 @@
+import os
+
+from importlib.metadata import version
+from toolviper.utils.logger import setup_logger
+
+__version__ = version("toolviper")
+
+# Setup default logger instance for module
+if not os.getenv("VIPER_LOGGER_NAME"):
+    os.environ["VIPER_LOGGER_NAME"] = "toolviper"
+    setup_logger(
+        logger_name="toolviper",
+        log_to_term=True,
+        log_to_file=False,
+        log_file="toolviper-logfile",
+        log_level="INFO",
+    )

toolviper-0.0.1/src/toolviper/config/client.param.json

@@ -0,0 +1,40 @@
+{
+    "local_client":{
+        "cores":{
+            "type":["int"],
+            "nullable": true
+        },
+        "autorestrictor": {
+            "type": ["boolean"],
+            "nullable": true
+        },
+        "local_dir": {
+            "type": ["boolean"],
+            "nullable": true
+        },
+        "wait_for_workers": {
+            "type": ["boolean"],
+            "nullable": true
+        },
+        "serial_execution": {
+            "type": ["boolean"],
+            "nullable": true
+        },
+        "memory_limit":{
+            "type":["str"],
+            "nullable": true
+        },
+        "dask_local_dir":{
+            "type":["str"],
+            "nullable": true
+        },
+        "log_params":{
+            "type":["dict"],
+            "nullable": true
+        },
+        "worker_log_params":{
+            "type":["dict"],
+            "nullable": true
+        }
+    }
+}

toolviper-0.0.1/src/toolviper/dask/__init__.py

@@ -0,0 +1,4 @@
+from .client import local_client, slurm_cluster_client
+from .client import get_thread_info, get_client, get_cluster
+
+__all__ = [s for s in dir() if not s.startswith("_")]