tooluniverse 0.1.2__tar.gz → 0.1.3__tar.gz

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Files changed (23) hide show
  1. {tooluniverse-0.1.2/src/tooluniverse.egg-info → tooluniverse-0.1.3}/PKG-INFO +11 -3
  2. {tooluniverse-0.1.2 → tooluniverse-0.1.3}/README.md +10 -2
  3. {tooluniverse-0.1.2 → tooluniverse-0.1.3}/setup.cfg +1 -1
  4. {tooluniverse-0.1.2 → tooluniverse-0.1.3}/src/tooluniverse/openfda_tool.py +1 -1
  5. {tooluniverse-0.1.2 → tooluniverse-0.1.3/src/tooluniverse.egg-info}/PKG-INFO +11 -3
  6. {tooluniverse-0.1.2 → tooluniverse-0.1.3}/LICENSE +0 -0
  7. {tooluniverse-0.1.2 → tooluniverse-0.1.3}/pyproject.toml +0 -0
  8. {tooluniverse-0.1.2 → tooluniverse-0.1.3}/src/tooluniverse/__init__.py +0 -0
  9. {tooluniverse-0.1.2 → tooluniverse-0.1.3}/src/tooluniverse/base_tool.py +0 -0
  10. {tooluniverse-0.1.2 → tooluniverse-0.1.3}/src/tooluniverse/data/__init__.py +0 -0
  11. {tooluniverse-0.1.2 → tooluniverse-0.1.3}/src/tooluniverse/data/fda_drug_labeling_tools.json +0 -0
  12. {tooluniverse-0.1.2 → tooluniverse-0.1.3}/src/tooluniverse/data/fda_drugs_with_brand_generic_names_for_tool.py +0 -0
  13. {tooluniverse-0.1.2 → tooluniverse-0.1.3}/src/tooluniverse/data/monarch_tools.json +0 -0
  14. {tooluniverse-0.1.2 → tooluniverse-0.1.3}/src/tooluniverse/data/opentarget_tools.json +0 -0
  15. {tooluniverse-0.1.2 → tooluniverse-0.1.3}/src/tooluniverse/data/special_tools.json +0 -0
  16. {tooluniverse-0.1.2 → tooluniverse-0.1.3}/src/tooluniverse/execute_function.py +0 -0
  17. {tooluniverse-0.1.2 → tooluniverse-0.1.3}/src/tooluniverse/graphql_tool.py +0 -0
  18. {tooluniverse-0.1.2 → tooluniverse-0.1.3}/src/tooluniverse/restful_tool.py +0 -0
  19. {tooluniverse-0.1.2 → tooluniverse-0.1.3}/src/tooluniverse/utils.py +0 -0
  20. {tooluniverse-0.1.2 → tooluniverse-0.1.3}/src/tooluniverse.egg-info/SOURCES.txt +0 -0
  21. {tooluniverse-0.1.2 → tooluniverse-0.1.3}/src/tooluniverse.egg-info/dependency_links.txt +0 -0
  22. {tooluniverse-0.1.2 → tooluniverse-0.1.3}/src/tooluniverse.egg-info/requires.txt +0 -0
  23. {tooluniverse-0.1.2 → tooluniverse-0.1.3}/src/tooluniverse.egg-info/top_level.txt +0 -0
{tooluniverse-0.1.2/src/tooluniverse.egg-info → tooluniverse-0.1.3}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.2
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  Name: tooluniverse
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- Version: 0.1.2
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+ Version: 0.1.3
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  Summary: A collection of biomedical tools designed for use by Agentic AI.
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  Home-page: https://github.com/mims-harvard/TxAgent
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  Author: Shanghua Gao
@@ -15,7 +15,7 @@ Requires-Dist: graphql-core
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  # ToolUniverse
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  [![ProjectPage](https://img.shields.io/badge/Page-TxAgent-red)](https://zitniklab.hms.harvard.edu/TxAgent)
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- [![PaperLink](https://img.shields.io/badge/PDF-TxAgent-red)]()
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+ [![PaperLink](https://img.shields.io/badge/Arxiv-TxAgent-red)](https://arxiv.org/pdf/2503.10970)
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  [![TxAgent-PIP](https://img.shields.io/badge/Pip-TxAgent-blue)](https://pypi.org/project/txagent/)
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  [![ToolUniverse-PIP](https://img.shields.io/badge/Pip-ToolUniverse-blue)](https://pypi.org/project/tooluniverse/)
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  [![TxAgent](https://img.shields.io/badge/Code-TxAgent-purple)](https://github.com/mims-harvard/TxAgent)
@@ -124,7 +124,15 @@ tooluni.run(query)
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  ## Citation
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  ```
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-
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+ @misc{gao2025txagent,
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+ title={TxAgent: An AI Agent for Therapeutic Reasoning Across a Universe of Tools},
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+ author={Shanghua Gao and Richard Zhu and Zhenglun Kong and Ayush Noori and Xiaorui Su and Curtis Ginder and Theodoros Tsiligkaridis and Marinka Zitnik},
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+ year={2025},
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+ eprint={2503.10970},
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+ archivePrefix={arXiv},
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+ primaryClass={cs.AI},
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+ url={https://arxiv.org/abs/2503.10970},
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+ }
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  ```
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  ## Contact
{tooluniverse-0.1.2 → tooluniverse-0.1.3}/README.md RENAMED
@@ -1,7 +1,7 @@
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  # ToolUniverse
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  [![ProjectPage](https://img.shields.io/badge/Page-TxAgent-red)](https://zitniklab.hms.harvard.edu/TxAgent)
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- [![PaperLink](https://img.shields.io/badge/PDF-TxAgent-red)]()
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+ [![PaperLink](https://img.shields.io/badge/Arxiv-TxAgent-red)](https://arxiv.org/pdf/2503.10970)
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  [![TxAgent-PIP](https://img.shields.io/badge/Pip-TxAgent-blue)](https://pypi.org/project/txagent/)
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  [![ToolUniverse-PIP](https://img.shields.io/badge/Pip-ToolUniverse-blue)](https://pypi.org/project/tooluniverse/)
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  [![TxAgent](https://img.shields.io/badge/Code-TxAgent-purple)](https://github.com/mims-harvard/TxAgent)
@@ -110,7 +110,15 @@ tooluni.run(query)
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  ## Citation
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  ```
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-
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+ @misc{gao2025txagent,
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+ title={TxAgent: An AI Agent for Therapeutic Reasoning Across a Universe of Tools},
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+ author={Shanghua Gao and Richard Zhu and Zhenglun Kong and Ayush Noori and Xiaorui Su and Curtis Ginder and Theodoros Tsiligkaridis and Marinka Zitnik},
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+ year={2025},
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+ eprint={2503.10970},
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+ archivePrefix={arXiv},
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+ primaryClass={cs.AI},
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+ url={https://arxiv.org/abs/2503.10970},
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+ }
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  ```
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  ## Contact
{tooluniverse-0.1.2 → tooluniverse-0.1.3}/setup.cfg RENAMED
@@ -1,6 +1,6 @@
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  [metadata]
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  name = tooluniverse
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- version = 0.1.2
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+ version = 0.1.3
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  description = A collection of biomedical tools designed for use by Agentic AI.
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  author = Shanghua Gao
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  author_email = shanghuagao@gmail.com
{tooluniverse-0.1.2 → tooluniverse-0.1.3}/src/tooluniverse/openfda_tool.py RENAMED
@@ -390,7 +390,7 @@ class FDADrugLabelGetDrugGenericNameTool(FDADrugLabelTool):
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  }
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- from data.fda_drugs_with_brand_generic_names_for_tool import drug_list
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+ from .data.fda_drugs_with_brand_generic_names_for_tool import drug_list
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  self.brand_to_generic = {drug['brand_name']: drug['generic_name'] for drug in drug_list}
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  self.generic_to_brand = {drug['generic_name']: drug['brand_name'] for drug in drug_list}
{tooluniverse-0.1.2 → tooluniverse-0.1.3/src/tooluniverse.egg-info}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.2
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  Name: tooluniverse
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- Version: 0.1.2
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+ Version: 0.1.3
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  Summary: A collection of biomedical tools designed for use by Agentic AI.
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  Home-page: https://github.com/mims-harvard/TxAgent
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  Author: Shanghua Gao
@@ -15,7 +15,7 @@ Requires-Dist: graphql-core
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  # ToolUniverse
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  [![ProjectPage](https://img.shields.io/badge/Page-TxAgent-red)](https://zitniklab.hms.harvard.edu/TxAgent)
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- [![PaperLink](https://img.shields.io/badge/PDF-TxAgent-red)]()
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+ [![PaperLink](https://img.shields.io/badge/Arxiv-TxAgent-red)](https://arxiv.org/pdf/2503.10970)
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  [![TxAgent-PIP](https://img.shields.io/badge/Pip-TxAgent-blue)](https://pypi.org/project/txagent/)
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  [![ToolUniverse-PIP](https://img.shields.io/badge/Pip-ToolUniverse-blue)](https://pypi.org/project/tooluniverse/)
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  [![TxAgent](https://img.shields.io/badge/Code-TxAgent-purple)](https://github.com/mims-harvard/TxAgent)
@@ -124,7 +124,15 @@ tooluni.run(query)
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  ## Citation
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  ```
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-
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+ @misc{gao2025txagent,
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+ title={TxAgent: An AI Agent for Therapeutic Reasoning Across a Universe of Tools},
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+ author={Shanghua Gao and Richard Zhu and Zhenglun Kong and Ayush Noori and Xiaorui Su and Curtis Ginder and Theodoros Tsiligkaridis and Marinka Zitnik},
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+ year={2025},
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+ eprint={2503.10970},
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+ archivePrefix={arXiv},
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+ primaryClass={cs.AI},
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+ url={https://arxiv.org/abs/2503.10970},
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+ }
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  ```
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  ## Contact
{tooluniverse-0.1.2 → tooluniverse-0.1.3}/LICENSE RENAMED
File without changes