tomtoolkit 2.32.1__tar.gz → 2.32.3__tar.gz

tomtoolkit-2.32.3/.git/FETCH_HEAD

@@ -0,0 +1 @@
+fd27b9a4996f9a04e4c027f915487a77c9682477		'fd27b9a4996f9a04e4c027f915487a77c9682477' of https://github.com/TOMToolkit/tom_base

tomtoolkit-2.32.3/.git/HEAD

@@ -0,0 +1 @@
+fd27b9a4996f9a04e4c027f915487a77c9682477

{tomtoolkit-2.32.1 → tomtoolkit-2.32.3}/.git/config

@@ -9,4 +9,4 @@
 [gc]
 	auto = 0
 [http "https://github.com/"]
-	extraheader = AUTHORIZATION: basic eC1hY2Nlc3MtdG9rZW46Z2hzX01uQlZxbWhmMlVIdkNvdWptZXBNM1pzRUJRRHFJcDQ3SFlxQQ==
+	extraheader = AUTHORIZATION: basic eC1hY2Nlc3MtdG9rZW46Z2hzX1NtV2NvcjF6QnVHTlBabDZCMnNSQnpPeFBvNXkzdjFaUHZrcA==

tomtoolkit-2.32.3/.git/hooks/commit-msg.sample

@@ -0,0 +1,74 @@
+#!/bin/sh
+#
+# An example hook script to check the commit log message.
+# Called by "git commit" with one argument, the name of the file
+# that has the commit message.  The hook should exit with non-zero
+# status after issuing an appropriate message if it wants to stop the
+# commit.  The hook is allowed to edit the commit message file.
+#
+# To enable this hook, rename this file to "commit-msg".
+
+# Uncomment the below to add a Signed-off-by line to the message.
+# Doing this in a hook is a bad idea in general, but the prepare-commit-msg
+# hook is more suited to it.
+#
+# SOB=$(git var GIT_AUTHOR_IDENT | sed -n 's/^\(.*>\).*$/Signed-off-by: \1/p')
+# grep -qs "^$SOB" "$1" || echo "$SOB" >> "$1"
+
+# This example catches duplicate Signed-off-by lines and messages that
+# would confuse 'git am'.
+
+ret=0
+
+test "" = "$(grep '^Signed-off-by: ' "$1" |
+	 sort | uniq -c | sed -e '/^[ 	]*1[ 	]/d')" || {
+	echo >&2 Duplicate Signed-off-by lines.
+	ret=1
+}
+
+comment_re="$(
+	{
+		git config --get-regexp "^core\.comment(char|string)\$" ||
+			echo '#'
+	} | sed -n -e '
+		${
+			s/^[^ ]* //
+			s|[][*./\]|\\&|g
+			s/^auto$/[#;@!$%^&|:]/
+			p
+		}'
+)"
+scissors_line="^${comment_re} -\{8,\} >8 -\{8,\}\$"
+comment_line="^${comment_re}.*"
+blank_line='^[ 	]*$'
+# Disallow lines starting with "diff -" or "Index: " in the body of the
+# message. Stop looking if we see a scissors line.
+line="$(sed -n -e "
+	# Skip comments and blank lines at the start of the file.
+	/${scissors_line}/q
+	/${comment_line}/d
+	/${blank_line}/d
+	# The first paragraph will become the subject header so
+	# does not need to be checked.
+	: subject
+	n
+	/${scissors_line}/q
+	/${blank_line}/!b subject
+	# Check the body of the message for problematic
+	# prefixes.
+	: body
+	n
+	/${scissors_line}/q
+	/${comment_line}/b body
+	/^diff -/{p;q;}
+	/^Index: /{p;q;}
+	b body
+	" "$1")"
+if test -n "$line"
+then
+	echo >&2 "Message contains a diff that will confuse 'git am'."
+	echo >&2 "To fix this indent the diff."
+	ret=1
+fi
+
+exit $ret

{tomtoolkit-2.32.1 → tomtoolkit-2.32.3}/.git/hooks/fsmonitor-watchman.sample

@@ -29,8 +29,6 @@ if ($version ne 2) {
 
 my $git_work_tree = get_working_dir();
 
-my $retry = 1;
-
 my $json_pkg;
 eval {
 	require JSON::XS;
@@ -123,8 +121,7 @@ sub watchman_query {
 sub is_work_tree_watched {
 	my ($output) = @_;
 	my $error = $output->{error};
-	if ($retry > 0 and $error and $error =~ m/unable to resolve root .* directory (.*) is not watched/) {
-		$retry--;
+	if ($error and $error =~ m/unable to resolve root .* directory (.*) is not watched/) {
 		my $response = qx/watchman watch "$git_work_tree"/;
 		die "Failed to make watchman watch '$git_work_tree'.\n" .
 		    "Falling back to scanning...\n" if $? != 0;
@@ -142,15 +139,12 @@ sub is_work_tree_watched {
 		# Watchman query just to get it over with now so we won't pay
 		# the cost in git to look up each individual file.
 		my $o = watchman_clock();
-		$error = $output->{error};
+		$error = $o->{error};
 
 		die "Watchman: $error.\n" .
 		"Falling back to scanning...\n" if $error;
 
 		output_result($o->{clock}, ("/"));
-		$last_update_token = $o->{clock};
-
-		eval { launch_watchman() };
 		return 0;
 	}
 

tomtoolkit-2.32.3/.git/logs/HEAD

@@ -0,0 +1 @@
+0000000000000000000000000000000000000000 fd27b9a4996f9a04e4c027f915487a77c9682477 runner <runner@runnervmg397c.jxsy3roshjiupjxqdac0o4tdme.ex.internal.cloudapp.net> 1779820867 +0000	checkout: moving from master to refs/tags/2.32.3

tomtoolkit-2.32.3/.git/refs/tags/2.32.3

@@ -0,0 +1 @@
+fd27b9a4996f9a04e4c027f915487a77c9682477

tomtoolkit-2.32.3/.git/shallow

@@ -0,0 +1 @@
+fd27b9a4996f9a04e4c027f915487a77c9682477

{tomtoolkit-2.32.1 → tomtoolkit-2.32.3}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: tomtoolkit
-Version: 2.32.1
+Version: 2.32.3
 Summary: TOM Toolkit and base modules
 License-Expression: GPL-3.0-only
 License-File: LICENSE
@@ -123,37 +123,12 @@ Please review our [code of conduct](CODE_OF_CONDUCT.md) for information about wh
 For development information targeted at the maintainers of the project, please see [README-dev.md](README-dev.md).
 
 ## Plugins
-
-### tom_alerts_dash
-
-The [tom_alerts_dash](https://github.com/TOMToolkit/tom_alerts_dash) plugin adds responsive ReactJS views to the
-`tom_alerts` module for supported brokers.
-
-### Antares
-
-The [tom-antares](https://github.com/TOMToolkit/tom_antares) plugin adds support
-for querying the Antares broker for targets of interest.
-
-### tom_nonsidereal_airmass
-
-The [tom_nonsidereal_airmass](https://github.com/TOMToolkit/tom_nonsidereal_airmass) plugin provides a templatetag
-that supports plotting for non-sidereal objects. The plugin is fully supported by the TOM Toolkit team; however,
-non-sidereal visibility calculations require the PyEphem library, which is minimally supported while its successor
-is in development. The library used for the TOM Toolkit sidereal visibility, astroplan, does not yet support
-non-sidereal visibility calculations.
-
-### tom-lt
-
-This module provides the ability to submit observations to the Liverpool Telescope Phase 2 system. It is in a very alpha
-state, with little error handling and minimal instrument options, but can successfully submit well-formed observation
-requests.
-
-[Github](https://github.com/TOMToolkit/tom_lt)
-
-### tom_registration
-
-The [tom_registration](https://github.com/TOMToolkit/tom_registration) plugin introduces support for two TOM registration
-flows--an open registration, and a registration that requires administrator approval.
+Our philosophy is to keep the TOM as lightweight and adaptable as possible.  
+Different TOM systems have different science goals and sometimes need 
+different functions. Rather than require users to support all 
+dependencies from all possible functions, we support a range of optional 
+plugin modules for the Toolkit.  Have a look at our [list of plugins](https://tom-toolkit.readthedocs.io/en/stable/api/plugins.html) 
+see which would benefit your science goals. 
 
 ## About the TOM Toolkit
 

{tomtoolkit-2.32.1 → tomtoolkit-2.32.3}/README.md

@@ -69,37 +69,12 @@ Please review our [code of conduct](CODE_OF_CONDUCT.md) for information about wh
 For development information targeted at the maintainers of the project, please see [README-dev.md](README-dev.md).
 
 ## Plugins
-
-### tom_alerts_dash
-
-The [tom_alerts_dash](https://github.com/TOMToolkit/tom_alerts_dash) plugin adds responsive ReactJS views to the
-`tom_alerts` module for supported brokers.
-
-### Antares
-
-The [tom-antares](https://github.com/TOMToolkit/tom_antares) plugin adds support
-for querying the Antares broker for targets of interest.
-
-### tom_nonsidereal_airmass
-
-The [tom_nonsidereal_airmass](https://github.com/TOMToolkit/tom_nonsidereal_airmass) plugin provides a templatetag
-that supports plotting for non-sidereal objects. The plugin is fully supported by the TOM Toolkit team; however,
-non-sidereal visibility calculations require the PyEphem library, which is minimally supported while its successor
-is in development. The library used for the TOM Toolkit sidereal visibility, astroplan, does not yet support
-non-sidereal visibility calculations.
-
-### tom-lt
-
-This module provides the ability to submit observations to the Liverpool Telescope Phase 2 system. It is in a very alpha
-state, with little error handling and minimal instrument options, but can successfully submit well-formed observation
-requests.
-
-[Github](https://github.com/TOMToolkit/tom_lt)
-
-### tom_registration
-
-The [tom_registration](https://github.com/TOMToolkit/tom_registration) plugin introduces support for two TOM registration
-flows--an open registration, and a registration that requires administrator approval.
+Our philosophy is to keep the TOM as lightweight and adaptable as possible.  
+Different TOM systems have different science goals and sometimes need 
+different functions. Rather than require users to support all 
+dependencies from all possible functions, we support a range of optional 
+plugin modules for the Toolkit.  Have a look at our [list of plugins](https://tom-toolkit.readthedocs.io/en/stable/api/plugins.html) 
+see which would benefit your science goals. 
 
 ## About the TOM Toolkit
 

tomtoolkit-2.32.3/docs/api/plugins.md

@@ -0,0 +1,159 @@
+TOM Toolkit Plugins
+-------------------
+
+We aim to keep the TOM as lightweight and flexible as possible, and we 
+recognize that every team has their own science goals and often need 
+different functions.  These often come with added dependencies.  
+
+Rather than require users to support all dependencies from all possible 
+functions, we support a range of optional plugin modules for the Toolkit. 
+These range from adding the ability to interface with additional
+observatories and catalogs, to providing additional plotting or data analytics functionality.
+
+### [tom_hermes](https://github.com/TOMToolkit/tom_hermes)
+
+The [Hermes](https://hermes.lco.global) service provides a archive of 
+astronomical alerts.  This plugin allows TOM users to query Hermes and share
+data with the service.  
+
+### [tom_fink](https://github.com/TOMToolkit/tom_fink)
+
+[Fink](https://fink-broker.org/) is an alert broker service.  This plugin 
+enables users to query this service and harvest alert information. 
+
+### [tom_antares](https://github.com/TOMToolkit/tom_antares)
+
+This plugin adds support for querying the [ANTARES](https://antares.noirlab.edu/) broker for targets of interest.
+
+### [tom_app_template](https://github.com/TOMToolkit/tom_app_template)
+
+This repository is designed to provide a starting template for TOM users 
+wishing to develop their own TOM app. This app contains all of the basic workflows, 
+directory structure, testing infrastructure, and instructions you will need to get started.
+
+### [tom_jpl](https://github.com/TOMToolkit/tom_jpl)
+
+The Jet Propulsion Laboratory provides a number of services supporting 
+Solar System science.  This plugin provides a TOM interface to JPL's 
+[SCOUT](https://cneos.jpl.nasa.gov/scout/intro.html) service.  
+
+### [tom_eso](https://github.com/TOMToolkit/tom_eso)
+
+This plugin enables users to compose and submit observation requests to 
+telescopes at the [European Southern Observatory](https://www.eso.org/public/). 
+
+### [tom_regions](https://github.com/TOMToolkit/tom_regions)
+
+This plugin allows a TOM to store sky regions defined from Multi-Order 
+Coverage maps. 
+
+### [tom_registration](https://github.com/TOMToolkit/tom_registration)
+
+This plugin introduces support for two TOM registration
+workflows--an open registration, and a registration that requires administrator approval.
+
+### [tom_tns](https://github.com/TOMToolkit/tom_tns)
+
+This plugin enables TOMs to report transient classifications to 
+the [Transient Name Server](https://www.wis-tns.org/).
+
+### [tom_alertstreams](https://github.com/TOMToolkit/tom_alertstreams)
+
+Apache Kafka is widely used in astrophysics for the dissemination of 
+alert packages.  This plugin enables a TOM system to listen to user-configured 
+alerts streams. 
+
+### [tom_demoapp](https://github.com/TOMToolkit/tom_demoapp)
+
+This TOM application is not designed to be installed by users, but instead act 
+as a development and demonstration app for users wishing to integrate their 
+own TOM applications with the base TOM toolkit. The code itself serves as example, 
+while the [wiki](https://github.com/TOMToolkit/tom_demoapp/wiki) gives a menu of existing integration points.
+
+### [tom_nonlocalizedevents](https://github.com/TOMToolkit/tom_nonlocalizedevents)
+
+Various events in astrophysics are hard to localize, for example gravitational wave
+ or neutrino detections.  This app allows the TOM to recognize that a
+given event may be associated with a number of candidates, and provides 
+custom views designed to support this workflow.
+
+### [tom_swift](https://github.com/TOMToolkit/tom_swift)
+
+The [Neil Gehrels Swift Observatory](https://swift.gsfc.nasa.gov/) is a space telescope offering 
+UV/Visible and X-ray instrumentation and rapid response capabilities.  This plugin 
+enables TOM users to submit requests for Target of Opportunity observations 
+with this spacecraft. 
+
+### [tom_classifications](https://github.com/TOMToolkit/tom_classifications)
+
+This app provides a number of data visualization tools for inspecting alert 
+data from multiple brokers. 
+
+### [tom_keck](https://github.com/TOMToolkit/tom_keck)
+
+Application to enable requests for Target of Opportunity observations 
+to be submitted to the [Keck Observatories](https://keckobservatory.org/).  
+Note: to be integrated with [AEONlib](https://github.com/AEONplus/AEONlib). 
+
+### [tom-lt](https://github.com/TOMToolkit/tom_lt)
+
+This module provides the ability to submit observations to the 
+[Liverpool Telescope](https://telescope.livjm.ac.uk/) Phase 2 system. It is in a very alpha
+state, with little error handling and minimal instrument options, but can successfully submit well-formed observation
+requests.
+
+### [tom-toolkit_component_lib](https://github.com/TOMToolkit/tom-toolkit-component-lib)
+
+Demonstration of how Javascript front-end components can be integrated with 
+a TOM. 
+
+### [tom_dash](https://github.com/TOMToolkit/tom_dash)
+
+This module demonstrates how [Plotly-Dash](https://dash.plotly.com/) components can be added to a 
+TOM for data exploration and visualization. 
+
+### [tom_gemini_community](https://github.com/TOMToolkit/tom_gemini_community)
+
+TOM module to enable observations to be submitted to the 
+[Gemini Telescope's](http://www.gemini.edu/) Phase 2 system. 
+
+### [tom_nonsidereal_airmass](https://github.com/TOMToolkit/tom_nonsidereal_airmass)
+
+This plugin provides a templatetag
+that supports plotting for non-sidereal objects. The plugin is fully supported by the TOM Toolkit team; however,
+non-sidereal visibility calculations require the PyEphem library, which is minimally supported while its successor
+is in development. The library used for the TOM Toolkit sidereal visibility, astroplan, does not yet support
+non-sidereal visibility calculations.
+
+### [tom_publications](https://github.com/TOMToolkit/tom_publications)
+
+This application prototyped tools to enable users to output latex-formatted 
+data from their TOM system. 
+
+### [herokutom](https://github.com/TOMToolkit/herokutom)
+
+This repository demonstrates how a TOM system can be deployed to a public 
+server using the [Heroku platform](https://www.heroku.com/).  
+
+## Archived plugins
+
+The following plugins are available but not currently supported.  In some 
+cases this is because the functionality has been integrated with the 
+base Toolkit. 
+
+### [tom_alerts_dash](https://github.com/TOMToolkit/tom_alerts_dash)
+
+This plugin adds responsive ReactJS views to the
+`tom_alerts` module for supported brokers.  The `tom_alerts` module has been superseded 
+by tom_dataservices in v3.0.0.  
+
+### [dockertom](https://github.com/TOMToolkit/dockertom)
+
+This repository demonstrates how to package a TOM system in a docker container, 
+which is often required for deployment.  
+
+### [tom_scimma](https://github.com/TOMToolkit/tom_scimma)
+
+This app enables a TOM to subscribe to the Hopskotch alert stream developed 
+by the Scalable Cyberinfrastructure to support Multi‑Messenger Astrophysics 
+([SCiMMA](https://scimma.org/)) project.