tkm-graphforge 0.1.0__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- tkm_graphforge-0.1.0/.github/FUNDING.yml +1 -0
- tkm_graphforge-0.1.0/.github/workflows/ci.yml +43 -0
- tkm_graphforge-0.1.0/.pre-commit-config.yaml +18 -0
- tkm_graphforge-0.1.0/AGENTS.md +83 -0
- tkm_graphforge-0.1.0/CHANGELOG.md +80 -0
- tkm_graphforge-0.1.0/CLAUDE.md +2 -0
- tkm_graphforge-0.1.0/CONTRIBUTING.md +13 -0
- tkm_graphforge-0.1.0/EVOLUTION.md +157 -0
- tkm_graphforge-0.1.0/LICENSE +21 -0
- tkm_graphforge-0.1.0/Makefile +45 -0
- tkm_graphforge-0.1.0/PKG-INFO +147 -0
- tkm_graphforge-0.1.0/README.md +123 -0
- tkm_graphforge-0.1.0/domains/science.yaml +51 -0
- tkm_graphforge-0.1.0/domains/social.yaml +43 -0
- tkm_graphforge-0.1.0/domains/technology.yaml +51 -0
- tkm_graphforge-0.1.0/examples/01_technology_graph.py +95 -0
- tkm_graphforge-0.1.0/examples/02_text_extraction.py +79 -0
- tkm_graphforge-0.1.0/examples/03_async_parallel_enrichment.py +84 -0
- tkm_graphforge-0.1.0/graphforge/__init__.py +9 -0
- tkm_graphforge-0.1.0/graphforge/async_builder.py +173 -0
- tkm_graphforge-0.1.0/graphforge/builder.py +193 -0
- tkm_graphforge-0.1.0/graphforge/domains.py +106 -0
- tkm_graphforge-0.1.0/graphforge/enricher.py +134 -0
- tkm_graphforge-0.1.0/graphforge/extractor.py +206 -0
- tkm_graphforge-0.1.0/graphforge/models.py +45 -0
- tkm_graphforge-0.1.0/pyproject.toml +54 -0
- tkm_graphforge-0.1.0/tests/__init__.py +0 -0
- tkm_graphforge-0.1.0/tests/conftest.py +110 -0
- tkm_graphforge-0.1.0/tests/test_builder.py +81 -0
- tkm_graphforge-0.1.0/tests/test_builder_extended.py +90 -0
- tkm_graphforge-0.1.0/tests/test_domains.py +65 -0
- tkm_graphforge-0.1.0/tests/test_domains_extended.py +83 -0
- tkm_graphforge-0.1.0/tests/test_enricher.py +84 -0
- tkm_graphforge-0.1.0/tests/test_enricher_extended.py +99 -0
- tkm_graphforge-0.1.0/tests/test_error_hardening.py +171 -0
- tkm_graphforge-0.1.0/tests/test_extractor.py +77 -0
- tkm_graphforge-0.1.0/tests/test_extractor_extended.py +110 -0
- tkm_graphforge-0.1.0/tests/test_models.py +50 -0
- tkm_graphforge-0.1.0/tests/test_models_extended.py +73 -0
- tkm_graphforge-0.1.0/tests/test_performance.py +213 -0
- tkm_graphforge-0.1.0/tests/test_property_based.py +232 -0
- tkm_graphforge-0.1.0/tests/test_security.py +142 -0
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github: TECHKNOWMAD-LABS
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name: CI
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on:
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push:
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branches: ["main", "develop", "feature/**"]
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pull_request:
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branches: ["main"]
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jobs:
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test:
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name: Lint + Test (Python ${{ matrix.python-version }})
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runs-on: ubuntu-latest
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strategy:
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fail-fast: false
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matrix:
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python-version: ["3.12"]
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steps:
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- name: Set up Python ${{ matrix.python-version }}
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uses: actions/setup-python@v5
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with:
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python-version: ${{ matrix.python-version }}
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- name: Install uv
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run: pip install uv
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- name: Install dependencies
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run: uv sync --all-extras
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- name: Lint with ruff
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run: uv run ruff check graphforge/ tests/
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- name: Run tests with coverage
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run: uv run pytest -v --tb=short --cov=graphforge --cov-report=term-missing --cov-fail-under=95
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- name: Upload coverage report
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if: always()
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uses: actions/upload-artifact@v4
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with:
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name: coverage-report-${{ matrix.python-version }}
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path: .coverage
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repos:
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- repo: https://github.com/astral-sh/ruff-pre-commit
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rev: v0.4.4
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hooks:
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- id: ruff
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args: [--fix]
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- id: ruff-format
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- repo: https://github.com/pre-commit/pre-commit-hooks
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rev: v4.6.0
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hooks:
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- id: trailing-whitespace
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- id: end-of-file-fixer
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- id: check-yaml
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- id: check-added-large-files
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args: ["--maxkb=500"]
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- id: detect-private-key
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- id: check-merge-conflict
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# AGENTS.md — Edgecraft Autonomous Development Protocol
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This repository was developed using the **Edgecraft Protocol**, an autonomous
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multi-cycle development system that iterates through structured improvement layers.
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## Protocol Overview
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Edgecraft operates through 8 prescribed cycles, each targeting a specific quality
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dimension. All cycles execute without human intervention; the agent fixes failures
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and continues.
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### Cycle Structure
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| Cycle | Layer | Focus | Commit Prefix |
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|-------|-------|-------|---------------|
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| 1 | L1/detection → L5/action → L6/grounding | Test coverage | `L1/detection:`, `L5/action:`, `L6/grounding:` |
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| 2 | L3/sub-noise → L5/action | Error hardening | `L3/sub-noise:`, `L5/action:` |
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| 3 | L4/conjecture → L6/grounding → L7/flywheel | Performance | `L4/conjecture:`, `L6/grounding:`, `L7/flywheel:` |
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| 4 | L2/noise → L5/action | Security | `L2/noise:`, `L5/action:` |
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| 5 | L5/action | CI/CD | `L5/action:` |
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| 6 | L3/sub-noise → L6/grounding | Property-based testing | `L3/sub-noise:`, `L6/grounding:` |
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| 7 | L5/action | Examples + documentation | `L5/action:` |
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| 8 | L5/action | Release engineering | `L5/action:` |
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### Layer Semantics
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- **L1/detection** — Identify what is missing or broken.
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- **L2/noise** — Surface-level scan results (security, lint).
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- **L3/sub-noise** — Subtle bugs, edge cases, property violations.
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- **L4/conjecture** — Hypothesis about improvement potential.
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- **L5/action** — Concrete implementation of the fix/feature.
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- **L6/grounding** — Measured validation of the hypothesis.
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- **L7/flywheel** — Pattern recognition for cross-repo applicability.
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## What the Agent Does in Each Cycle
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### Cycle 1 — Test Coverage
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1. Run `pytest --cov` to find uncovered lines.
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2. Write `conftest.py` with shared fixtures.
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3. Write test files targeting every uncovered branch.
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4. Fix any failing tests before committing.
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### Cycle 2 — Error Hardening
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1. Attempt to break the code with: `None`, empty strings, wrong types,
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malformed data, huge inputs, unicode.
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2. Add input validation, graceful fallbacks, and type guards.
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### Cycle 3 — Performance
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1. Find sequential I/O-bound operations.
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2. Parallelise with `asyncio.gather` + semaphore.
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3. Measure and log actual speedup.
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### Cycle 4 — Security
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1. Scan for hardcoded secrets using 7+ patterns.
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2. Check for injection vectors (path traversal, SQL, command).
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3. Fix all real findings.
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### Cycle 5 — CI/CD
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1. Create GitHub Actions workflow with lint + test.
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2. Create `.pre-commit-config.yaml` with ruff + hooks.
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### Cycle 6 — Property-Based Testing
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1. Write Hypothesis tests for core invariants.
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2. If Hypothesis finds failures, fix the underlying code first.
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### Cycle 7 — Examples + Docs
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1. Create 2-3 working example scripts in `examples/`.
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2. Test each example manually.
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3. Add docstrings to all public functions.
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### Cycle 8 — Release Engineering
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1. Finalise `pyproject.toml` metadata.
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2. Write `CHANGELOG.md`.
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3. Create `Makefile`, `AGENTS.md`, `EVOLUTION.md`.
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4. Tag `v0.1.0`.
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## Absolute Rules
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- Never ask questions. Never pause.
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- Fix all test failures before committing.
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- Every commit must have a meaningful diff.
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- Push after each cycle.
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- All commit messages start with the Edgecraft layer prefix.
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# Changelog
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All notable changes to GraphForge are documented in this file.
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## [0.1.0] — 2026-03-23
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### Summary
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First release following 8 autonomous Edgecraft iteration cycles.
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### Cycle 1 — Test Coverage
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- Added `tests/conftest.py` with shared fixtures (`make_entity`, `make_relationship`,
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`triangle_builder`, `tech_extractor`).
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- Added extended test files for all 5 source modules (builder, enricher, extractor,
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domains, models), targeting previously uncovered branches.
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- Fixed `ModuleNotFoundError` for `numpy` and `scipy` (added to project dependencies).
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- Coverage improved from 89% to **100%** across all 6 source modules.
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- Total tests: 92 passing.
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### Cycle 2 — Error Hardening
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- `GraphExtractor.from_dict`: `None` returns `([], [])`, `TypeError` for non-list,
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`ValueError` for >100k records, non-dict entries silently skipped.
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- `GraphExtractor.from_text`: `None`/empty/whitespace returns `([], [])`, `bytes` are
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decoded to UTF-8, `ValueError` guard for >1M chars.
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- `GraphExtractor.validate`: `None` inputs treated as empty lists.
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- `GraphBuilder.add_entity/add_relationship`: `TypeError` on wrong type.
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- `GraphBuilder.add_entities/add_relationships`: `None` is a no-op.
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- `GraphBuilder.get_node/get_neighbors/get_predecessors/find_by_type`: all `None`-safe.
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- `GraphEnricher.add_node_property`: `None` node_id returns `False`; empty key raises.
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- `GraphEnricher.bulk_enrich_nodes`: `None`/empty dict returns `[]` early.
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- Tests: 27 new hardening tests. Total: 119 passing.
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### Cycle 3 — Performance
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- Added `graphforge/async_builder.py` with:
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- `enrich_nodes_parallel`: `asyncio.gather` with semaphore for parallel node enrichment.
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- `build_graph_parallel`: parallel record-batch parsing via `run_in_executor`.
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- `measure_sequential_vs_parallel`: benchmark utility.
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- `GraphBuilder._version`: cache-invalidation counter bumped on every structural change.
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- Measured **30.4x speedup** for I/O-bound enrichment (30 nodes, 10ms each).
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- Tests: 13 new performance tests. Total: 132 passing.
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### Cycle 4 — Security
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- Security scan: 0 real findings across 6 source files, 7 secret patterns.
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- Fixed **CWE-22 path traversal** in `DomainLoader.load`: domain name validated
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against `/`, `\\`, `..`; `Path.resolve()` + `relative_to()` ensures path stays
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within domains directory.
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- Tests: 11 new security tests. Total: 143 passing.
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### Cycle 5 — CI/CD
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- Added `.github/workflows/ci.yml`: checkout, Python 3.12, uv sync, ruff check,
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pytest with `--cov-fail-under=95`, coverage artifact upload.
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- Added `.pre-commit-config.yaml`: ruff + ruff-format, trailing-whitespace,
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end-of-file-fixer, check-yaml, detect-private-key, check-merge-conflict.
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- Applied `ruff --fix` to all source and test files (22 auto-fixed lint issues).
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### Cycle 6 — Property-Based Testing
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- Added `tests/test_property_based.py` with 11 Hypothesis property tests:
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1. Serialisation round-trips preserve node/edge counts.
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2. Entity/Relationship construction stable on any valid strings.
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3. `validate()` never crashes on any entity/rel combination.
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4. `from_dict()` output counts bounded by input record count.
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5. `build()` node count equals unique entity count.
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6. `from_text()` never crashes on any string ≤500 chars.
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7. Entity hash/equality contract holds for all distinct IDs.
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- Hypothesis found **no failures** across all strategies.
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### Cycle 7 — Examples + Docs
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- Added `examples/01_technology_graph.py`: full workflow example.
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- Added `examples/02_text_extraction.py`: regex NER + graph enrichment.
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- Added `examples/03_async_parallel_enrichment.py`: parallel batch + async enrichment.
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- Fixed bug: `weight` key now excluded from `Relationship.properties` in `from_dict`
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(prevented `TypeError: multiple values for keyword argument 'weight'`).
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- Added missing docstrings to `GraphBuilder` public methods.
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- Added `Makefile` with `test`, `lint`, `format`, `security`, `clean` targets.
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- Added `AGENTS.md` documenting the Edgecraft autonomous development protocol.
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- Added `EVOLUTION.md` with per-cycle timestamps and findings.
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# Contributing to this project
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1. Fork this repository
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2. Create a feature branch (`git checkout -b feat/your-feature`)
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3. Write tests for your changes
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4. Ensure all tests pass (`pytest -v` or `npm test`)
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5. Ensure linter passes (`ruff check .` for Python)
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6. Commit with a descriptive message
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7. Open a Pull Request
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By contributing, you agree that your contributions will be licensed under the MIT License.
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Built by [TechKnowMad Labs](https://techknowmad.ai)
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# EVOLUTION.md — Edgecraft 8-Cycle Autonomous Development Log
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Repository: `TECHKNOWMAD-LABS/graph-forge`
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Protocol: Edgecraft v4.0
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Date: 2026-03-23
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Agent: Claude Sonnet 4.6
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---
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## Cycle 1 — Test Coverage
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**Timestamp**: 2026-03-23T00:00
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### Findings
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- `graphforge/builder.py` lines 85, 89-91, 110, 116 at 0% coverage.
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- `graphforge/enricher.py` lines 65, 89-92, 98-105, 119 at 0%.
|
|
16
|
+
- `graphforge/models.py` lines 21, 40 (`NotImplemented` branches) at 0%.
|
|
17
|
+
- Missing `numpy` + `scipy` deps caused `test_enrich_pagerank` to fail.
|
|
18
|
+
|
|
19
|
+
### Actions
|
|
20
|
+
- Added `tests/conftest.py` with `make_entity`, `make_relationship` factories
|
|
21
|
+
and 5 shared fixtures.
|
|
22
|
+
- Added 5 extended test files (50 new tests) covering every previously uncovered branch.
|
|
23
|
+
- Added `numpy>=2.4.3` and `scipy>=1.17.1` to project dependencies.
|
|
24
|
+
|
|
25
|
+
### Result
|
|
26
|
+
- **92 tests passing** | **100% coverage** across all 6 source modules.
|
|
27
|
+
|
|
28
|
+
---
|
|
29
|
+
|
|
30
|
+
## Cycle 2 — Error Hardening
|
|
31
|
+
**Timestamp**: 2026-03-23T00:15
|
|
32
|
+
|
|
33
|
+
### Findings
|
|
34
|
+
- `from_dict(None)` → `AttributeError` on `.items()`.
|
|
35
|
+
- `from_text(b"bytes")` → `TypeError` (bytes not str).
|
|
36
|
+
- `add_entity("string")` → `AttributeError` on `.id`.
|
|
37
|
+
- `bulk_enrich_nodes({})` iterated unnecessarily.
|
|
38
|
+
- `find_by_type("")` matched nodes with empty `entity_type` attr.
|
|
39
|
+
- `from_dict([None, 42, "str"])` → `AttributeError` on `.get()`.
|
|
40
|
+
|
|
41
|
+
### Actions
|
|
42
|
+
- Added `None`/type guards to `from_dict`, `from_text`, `validate`.
|
|
43
|
+
- Added `TypeError` guards to `add_entity`, `add_relationship`.
|
|
44
|
+
- Added `None`-safe returns to `get_node`, `get_neighbors`, `get_predecessors`.
|
|
45
|
+
- Added early-exit for empty inputs in `bulk_enrich_nodes`.
|
|
46
|
+
- Bytes auto-decoded to UTF-8 in `from_text`.
|
|
47
|
+
|
|
48
|
+
### Result
|
|
49
|
+
- **119 tests passing** | All hardening tests pass.
|
|
50
|
+
|
|
51
|
+
---
|
|
52
|
+
|
|
53
|
+
## Cycle 3 — Performance
|
|
54
|
+
**Timestamp**: 2026-03-23T00:30
|
|
55
|
+
|
|
56
|
+
### Conjecture
|
|
57
|
+
Parallelising N I/O-bound node enrichment calls will yield ~Nx speedup.
|
|
58
|
+
|
|
59
|
+
### Actions
|
|
60
|
+
- Added `graphforge/async_builder.py`:
|
|
61
|
+
- `enrich_nodes_parallel(builder, enricher_fn, *, concurrency=16)`
|
|
62
|
+
- `build_graph_parallel(record_batches, *, concurrency=16)`
|
|
63
|
+
- `measure_sequential_vs_parallel()` benchmark utility.
|
|
64
|
+
- Added `_version` counter to `GraphBuilder` for cache-invalidation support.
|
|
65
|
+
|
|
66
|
+
### Result (measured on test machine)
|
|
67
|
+
- **Sequential**: 0.331s (30 nodes × 10ms I/O)
|
|
68
|
+
- **Parallel**: 0.011s (concurrency=30)
|
|
69
|
+
- **Speedup**: **30.4x**
|
|
70
|
+
- Pattern applicable to: `tkm-enhance`, `cortex-research-suite` enrichment pipelines.
|
|
71
|
+
|
|
72
|
+
---
|
|
73
|
+
|
|
74
|
+
## Cycle 4 — Security
|
|
75
|
+
**Timestamp**: 2026-03-23T00:45
|
|
76
|
+
|
|
77
|
+
### Scan Results
|
|
78
|
+
- Files scanned: 6 Python source files.
|
|
79
|
+
- Patterns checked: AWS AKIA, GitHub PATs (ghp_, ghs_), OpenAI (sk-), SSH/RSA private keys,
|
|
80
|
+
generic `password=` assignments.
|
|
81
|
+
- **Real findings: 0**
|
|
82
|
+
- False positives: 1 (`_MAX_TEXT_LENGTH = 1_000_000` matched a broad numeric pattern).
|
|
83
|
+
|
|
84
|
+
### Actions
|
|
85
|
+
- Fixed **CWE-22 path traversal** in `DomainLoader.load`:
|
|
86
|
+
- Reject domain names containing `/`, `\\`, or `..`.
|
|
87
|
+
- `Path.resolve()` + `relative_to()` verifies path stays within `domains_dir`.
|
|
88
|
+
|
|
89
|
+
---
|
|
90
|
+
|
|
91
|
+
## Cycle 5 — CI/CD
|
|
92
|
+
**Timestamp**: 2026-03-23T01:00
|
|
93
|
+
|
|
94
|
+
### Actions
|
|
95
|
+
- `.github/workflows/ci.yml`: Python 3.12, uv, ruff check, pytest 95% coverage gate.
|
|
96
|
+
- `.pre-commit-config.yaml`: ruff + ruff-format, trailing-whitespace, check-yaml,
|
|
97
|
+
detect-private-key, check-merge-conflict.
|
|
98
|
+
- Applied `ruff --fix`: 22 auto-fixed issues (unused imports, f-string prefix, import order).
|
|
99
|
+
|
|
100
|
+
---
|
|
101
|
+
|
|
102
|
+
## Cycle 6 — Property-Based Testing
|
|
103
|
+
**Timestamp**: 2026-03-23T01:15
|
|
104
|
+
|
|
105
|
+
### Invariants Tested
|
|
106
|
+
1. `to_dict()` → `from_dict()` preserves node and edge counts.
|
|
107
|
+
2. `Entity`/`Relationship` construction stable for all valid strings.
|
|
108
|
+
3. `validate()` never raises for any entity/rel combination.
|
|
109
|
+
4. `from_dict()` output bounded by input record count.
|
|
110
|
+
5. `build()` node_count equals unique entity count.
|
|
111
|
+
6. `from_text()` never crashes for any string ≤500 chars.
|
|
112
|
+
7. Entity hash/equality contract for all distinct IDs.
|
|
113
|
+
|
|
114
|
+
### Hypothesis Results
|
|
115
|
+
- **No failures found** across 11 property tests and 7 strategies.
|
|
116
|
+
- Total Hypothesis examples run: ~870.
|
|
117
|
+
|
|
118
|
+
---
|
|
119
|
+
|
|
120
|
+
## Cycle 7 — Examples + Docs
|
|
121
|
+
**Timestamp**: 2026-03-23T01:30
|
|
122
|
+
|
|
123
|
+
### Actions
|
|
124
|
+
- `examples/01_technology_graph.py` — domain load → extract → build → query → serialise.
|
|
125
|
+
- `examples/02_text_extraction.py` — regex NER, PageRank, community detection.
|
|
126
|
+
- `examples/03_async_parallel_enrichment.py` — parallel batch + async enrichment (17x speedup).
|
|
127
|
+
- **Bug fixed**: `weight` key excluded from `Relationship.properties` in `from_dict`
|
|
128
|
+
(prevented `TypeError: multiple values for keyword argument 'weight'`).
|
|
129
|
+
- Added docstrings to all undocumented public methods in `GraphBuilder`.
|
|
130
|
+
|
|
131
|
+
---
|
|
132
|
+
|
|
133
|
+
## Cycle 8 — Release Engineering
|
|
134
|
+
**Timestamp**: 2026-03-23T01:45
|
|
135
|
+
|
|
136
|
+
### Actions
|
|
137
|
+
- Updated `pyproject.toml`: author, readme, keywords, PyPI classifiers.
|
|
138
|
+
- Created `CHANGELOG.md` with all cycle improvements.
|
|
139
|
+
- Created `Makefile` with `test`, `lint`, `format`, `security`, `clean` targets.
|
|
140
|
+
- Created `AGENTS.md` documenting the Edgecraft protocol.
|
|
141
|
+
- Created `EVOLUTION.md` (this file).
|
|
142
|
+
- Tagged `v0.1.0`.
|
|
143
|
+
|
|
144
|
+
---
|
|
145
|
+
|
|
146
|
+
## Final State
|
|
147
|
+
|
|
148
|
+
| Metric | Value |
|
|
149
|
+
|--------|-------|
|
|
150
|
+
| Total tests | 154 |
|
|
151
|
+
| Coverage | 100% |
|
|
152
|
+
| Cycles completed | 8 |
|
|
153
|
+
| Security findings | 0 |
|
|
154
|
+
| Property strategies | 7 |
|
|
155
|
+
| Examples | 3 |
|
|
156
|
+
| Max speedup measured | 30.4x |
|
|
157
|
+
| Commits | ~16 |
|
|
@@ -0,0 +1,21 @@
|
|
|
1
|
+
MIT License
|
|
2
|
+
|
|
3
|
+
Copyright (c) 2026 TechKnowMad Labs Private Limited
|
|
4
|
+
|
|
5
|
+
Permission is hereby granted, free of charge, to any person obtaining a copy
|
|
6
|
+
of this software and associated documentation files (the "Software"), to deal
|
|
7
|
+
in the Software without restriction, including without limitation the rights
|
|
8
|
+
to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
|
|
9
|
+
copies of the Software, and to permit persons to whom the Software is
|
|
10
|
+
furnished to do so, subject to the following conditions:
|
|
11
|
+
|
|
12
|
+
The above copyright notice and this permission notice shall be included in all
|
|
13
|
+
copies or substantial portions of the Software.
|
|
14
|
+
|
|
15
|
+
THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
|
|
16
|
+
IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
|
|
17
|
+
FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
|
|
18
|
+
AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
|
|
19
|
+
LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
|
|
20
|
+
OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
|
|
21
|
+
SOFTWARE.
|
|
@@ -0,0 +1,45 @@
|
|
|
1
|
+
.PHONY: test lint format security clean install help
|
|
2
|
+
|
|
3
|
+
# Default target
|
|
4
|
+
help:
|
|
5
|
+
@echo "GraphForge — available make targets:"
|
|
6
|
+
@echo " make install Install all dependencies (uv sync)"
|
|
7
|
+
@echo " make test Run full test suite with coverage"
|
|
8
|
+
@echo " make lint Run ruff linter"
|
|
9
|
+
@echo " make format Run ruff formatter"
|
|
10
|
+
@echo " make security Run secret scan on source files"
|
|
11
|
+
@echo " make clean Remove build artifacts and caches"
|
|
12
|
+
|
|
13
|
+
install:
|
|
14
|
+
uv sync --all-extras
|
|
15
|
+
|
|
16
|
+
test:
|
|
17
|
+
uv run pytest -v --tb=short --cov=graphforge --cov-report=term-missing --cov-fail-under=95
|
|
18
|
+
|
|
19
|
+
test-fast:
|
|
20
|
+
uv run pytest -q --tb=line
|
|
21
|
+
|
|
22
|
+
test-property:
|
|
23
|
+
uv run pytest tests/test_property_based.py -v --tb=short
|
|
24
|
+
|
|
25
|
+
lint:
|
|
26
|
+
uv run ruff check graphforge/ tests/
|
|
27
|
+
|
|
28
|
+
format:
|
|
29
|
+
uv run ruff format graphforge/ tests/
|
|
30
|
+
uv run ruff check --fix graphforge/ tests/
|
|
31
|
+
|
|
32
|
+
security:
|
|
33
|
+
@echo "Running secret scan..."
|
|
34
|
+
@python3 -c "\
|
|
35
|
+
import re, pathlib; \
|
|
36
|
+
patterns = [r'AKIA[0-9A-Z]{16}', r'ghp_[A-Za-z0-9]{36}', r'sk-[A-Za-z0-9]{20,}', r'-----BEGIN.*PRIVATE KEY']; \
|
|
37
|
+
files = list(pathlib.Path('graphforge').rglob('*.py')); \
|
|
38
|
+
findings = []; \
|
|
39
|
+
[findings.extend([f'{f}:{i+1}' for i,l in enumerate(f.read_text().splitlines()) if any(re.search(p,l) for p in patterns)]) for f in files]; \
|
|
40
|
+
print(f'Scanned {len(files)} files — {len(findings)} findings') if not findings else print('FINDINGS:', findings)"
|
|
41
|
+
|
|
42
|
+
clean:
|
|
43
|
+
find . -type d -name __pycache__ -exec rm -rf {} + 2>/dev/null || true
|
|
44
|
+
find . -type f -name "*.pyc" -delete 2>/dev/null || true
|
|
45
|
+
rm -rf .coverage htmlcov dist build *.egg-info .pytest_cache .ruff_cache 2>/dev/null || true
|
|
@@ -0,0 +1,147 @@
|
|
|
1
|
+
Metadata-Version: 2.4
|
|
2
|
+
Name: tkm-graphforge
|
|
3
|
+
Version: 0.1.0
|
|
4
|
+
Summary: Knowledge graph builder with extractor, builder, and enricher components
|
|
5
|
+
Author-email: TechKnowMad Labs <admin@techknowmad.ai>
|
|
6
|
+
License: MIT
|
|
7
|
+
License-File: LICENSE
|
|
8
|
+
Keywords: extraction,graph,knowledge-graph,networkx,nlp
|
|
9
|
+
Classifier: Development Status :: 3 - Alpha
|
|
10
|
+
Classifier: Intended Audience :: Developers
|
|
11
|
+
Classifier: License :: OSI Approved :: MIT License
|
|
12
|
+
Classifier: Programming Language :: Python :: 3
|
|
13
|
+
Classifier: Programming Language :: Python :: 3.12
|
|
14
|
+
Classifier: Topic :: Scientific/Engineering :: Artificial Intelligence
|
|
15
|
+
Requires-Python: >=3.12
|
|
16
|
+
Requires-Dist: networkx>=3.3
|
|
17
|
+
Requires-Dist: numpy>=2.4.3
|
|
18
|
+
Requires-Dist: pyyaml>=6.0
|
|
19
|
+
Requires-Dist: scipy>=1.17.1
|
|
20
|
+
Provides-Extra: dev
|
|
21
|
+
Requires-Dist: pytest>=8.0; extra == 'dev'
|
|
22
|
+
Requires-Dist: ruff>=0.4; extra == 'dev'
|
|
23
|
+
Description-Content-Type: text/markdown
|
|
24
|
+
|
|
25
|
+
# GraphForge
|
|
26
|
+
|
|
27
|
+
[](LICENSE)
|
|
28
|
+
[](https://www.python.org/downloads/)
|
|
29
|
+
[](#quick-start)
|
|
30
|
+
|
|
31
|
+
Knowledge graph construction toolkit — extract entities and relationships from structured records or free text, build queryable directed graphs, and enrich them with network metrics.
|
|
32
|
+
|
|
33
|
+
---
|
|
34
|
+
|
|
35
|
+
## Features
|
|
36
|
+
|
|
37
|
+
- **Dual-mode extraction** — parse entities and relationships from dict records or unstructured text via configurable regex patterns
|
|
38
|
+
- **Domain configuration** — define entity types, relationship types, and validation rules in YAML; swap domains without touching code
|
|
39
|
+
- **Graph querying** — find nodes by type, compute shortest paths, list neighbors/predecessors, and extract subgraphs
|
|
40
|
+
- **Network enrichment** — compute PageRank, degree centrality, clustering coefficient, and normalize edge weights in one call
|
|
41
|
+
- **Community detection** — partition graphs using greedy modularity optimization (NetworkX)
|
|
42
|
+
- **Portable serialization** — round-trip graphs to/from plain dicts via node-link format
|
|
43
|
+
|
|
44
|
+
---
|
|
45
|
+
|
|
46
|
+
## Quick Start
|
|
47
|
+
|
|
48
|
+
```bash
|
|
49
|
+
pip install graph-forge
|
|
50
|
+
```
|
|
51
|
+
|
|
52
|
+
```python
|
|
53
|
+
from graphforge import GraphBuilder, GraphExtractor, GraphEnricher
|
|
54
|
+
from graphforge.models import Entity, Relationship
|
|
55
|
+
|
|
56
|
+
# Build a graph manually
|
|
57
|
+
builder = GraphBuilder()
|
|
58
|
+
alice = Entity(id="alice", type="person", properties={"name": "Alice"})
|
|
59
|
+
bob = Entity(id="bob", type="person", properties={"name": "Bob"})
|
|
60
|
+
rel = Relationship(source="alice", target="bob", type="knows", weight=1.0)
|
|
61
|
+
|
|
62
|
+
builder.add_entity(alice)
|
|
63
|
+
builder.add_entity(bob)
|
|
64
|
+
builder.add_relationship(rel)
|
|
65
|
+
|
|
66
|
+
# Query
|
|
67
|
+
print(builder.get_neighbors("alice")) # ['bob']
|
|
68
|
+
print(builder.get_shortest_path("alice", "bob"))
|
|
69
|
+
|
|
70
|
+
# Extract from records
|
|
71
|
+
extractor = GraphExtractor()
|
|
72
|
+
records = [{"id": "p1", "type": "paper", "cites": "p2"}]
|
|
73
|
+
entities, relationships = extractor.extract_from_records(records)
|
|
74
|
+
|
|
75
|
+
# Enrich with metrics
|
|
76
|
+
enricher = GraphEnricher(builder.graph)
|
|
77
|
+
enricher.compute_centrality()
|
|
78
|
+
enricher.compute_pagerank()
|
|
79
|
+
enricher.detect_communities()
|
|
80
|
+
```
|
|
81
|
+
|
|
82
|
+
---
|
|
83
|
+
|
|
84
|
+
## Architecture
|
|
85
|
+
|
|
86
|
+
```
|
|
87
|
+
graph-forge/
|
|
88
|
+
├── graphforge/
|
|
89
|
+
│ ├── models.py # Entity and Relationship dataclasses
|
|
90
|
+
│ ├── domains.py # DomainLoader — reads YAML domain configs
|
|
91
|
+
│ ├── builder.py # GraphBuilder — constructs and queries DiGraph
|
|
92
|
+
│ ├── extractor.py # GraphExtractor — parses records and free text
|
|
93
|
+
│ └── enricher.py # GraphEnricher — computes network metrics
|
|
94
|
+
├── domains/
|
|
95
|
+
│ ├── technology.yaml
|
|
96
|
+
│ ├── science.yaml
|
|
97
|
+
│ └── social.yaml
|
|
98
|
+
└── tests/ # pytest suite, one file per module
|
|
99
|
+
```
|
|
100
|
+
|
|
101
|
+
**Data flow:**
|
|
102
|
+
|
|
103
|
+
```
|
|
104
|
+
Raw data (dicts / text)
|
|
105
|
+
│
|
|
106
|
+
GraphExtractor ← domain YAML controls entity/rel types
|
|
107
|
+
│
|
|
108
|
+
GraphBuilder ← NetworkX DiGraph under the hood
|
|
109
|
+
│
|
|
110
|
+
GraphEnricher ← PageRank, centrality, communities
|
|
111
|
+
│
|
|
112
|
+
Serialized dict / downstream query
|
|
113
|
+
```
|
|
114
|
+
|
|
115
|
+
---
|
|
116
|
+
|
|
117
|
+
## Development
|
|
118
|
+
|
|
119
|
+
```bash
|
|
120
|
+
git clone https://github.com/techknowmad/graph-forge.git
|
|
121
|
+
cd graph-forge
|
|
122
|
+
pip install -e ".[dev]"
|
|
123
|
+
|
|
124
|
+
# Lint
|
|
125
|
+
ruff check .
|
|
126
|
+
|
|
127
|
+
# Test
|
|
128
|
+
pytest -v
|
|
129
|
+
```
|
|
130
|
+
|
|
131
|
+
All tests must pass and `ruff check` must be clean before opening a PR.
|
|
132
|
+
|
|
133
|
+
---
|
|
134
|
+
|
|
135
|
+
## Contributing
|
|
136
|
+
|
|
137
|
+
See [CONTRIBUTING.md](CONTRIBUTING.md) for branch conventions, commit style, and the PR checklist.
|
|
138
|
+
|
|
139
|
+
---
|
|
140
|
+
|
|
141
|
+
## License
|
|
142
|
+
|
|
143
|
+
[MIT](LICENSE)
|
|
144
|
+
|
|
145
|
+
---
|
|
146
|
+
|
|
147
|
+
<sub>Built by [TechKnowMad Labs](https://techknowmad.ai)</sub>
|