tiny-datalog 0.1.2__tar.gz → 0.2.0__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {tiny_datalog-0.1.2/tiny_datalog.egg-info → tiny_datalog-0.2.0}/PKG-INFO +18 -14
- {tiny_datalog-0.1.2 → tiny_datalog-0.2.0}/README.md +16 -12
- {tiny_datalog-0.1.2 → tiny_datalog-0.2.0}/pyproject.toml +3 -2
- {tiny_datalog-0.1.2 → tiny_datalog-0.2.0}/tiny_datalog/__init__.py +3 -2
- tiny_datalog-0.2.0/tiny_datalog/defeasible.py +462 -0
- {tiny_datalog-0.1.2 → tiny_datalog-0.2.0/tiny_datalog.egg-info}/PKG-INFO +18 -14
- {tiny_datalog-0.1.2 → tiny_datalog-0.2.0}/tiny_datalog.egg-info/SOURCES.txt +1 -0
- {tiny_datalog-0.1.2 → tiny_datalog-0.2.0}/tiny_datalog.egg-info/entry_points.txt +1 -0
- {tiny_datalog-0.1.2 → tiny_datalog-0.2.0}/LICENSE +0 -0
- {tiny_datalog-0.1.2 → tiny_datalog-0.2.0}/setup.cfg +0 -0
- {tiny_datalog-0.1.2 → tiny_datalog-0.2.0}/tiny_datalog/containment.py +0 -0
- {tiny_datalog-0.1.2 → tiny_datalog-0.2.0}/tiny_datalog/datalog.py +0 -0
- {tiny_datalog-0.1.2 → tiny_datalog-0.2.0}/tiny_datalog/incremental.py +0 -0
- {tiny_datalog-0.1.2 → tiny_datalog-0.2.0}/tiny_datalog/magic.py +0 -0
- {tiny_datalog-0.1.2 → tiny_datalog-0.2.0}/tiny_datalog/prolog.py +0 -0
- {tiny_datalog-0.1.2 → tiny_datalog-0.2.0}/tiny_datalog/semantics.py +0 -0
- {tiny_datalog-0.1.2 → tiny_datalog-0.2.0}/tiny_datalog/semiring.py +0 -0
- {tiny_datalog-0.1.2 → tiny_datalog-0.2.0}/tiny_datalog/subsumption.py +0 -0
- {tiny_datalog-0.1.2 → tiny_datalog-0.2.0}/tiny_datalog/tabling.py +0 -0
- {tiny_datalog-0.1.2 → tiny_datalog-0.2.0}/tiny_datalog.egg-info/dependency_links.txt +0 -0
- {tiny_datalog-0.1.2 → tiny_datalog-0.2.0}/tiny_datalog.egg-info/top_level.txt +0 -0
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Metadata-Version: 2.4
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Name: tiny-datalog
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Version: 0.
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Version: 0.2.0
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Summary: A Datalog engine small enough to read in an afternoon
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Author: Andrew Goodchild
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License-Expression: MIT
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Project-URL: Issues, https://github.com/andrewgoodchild/tiny-datalog/issues
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Project-URL: Changelog, https://github.com/andrewgoodchild/tiny-datalog/releases
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Project-URL: Lessons, https://github.com/andrewgoodchild/tiny-datalog/tree/main/lessons
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Keywords: datalog,logic programming,deductive database,semi-naive evaluation,magic sets,provenance,stable models,teaching
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Keywords: datalog,logic programming,deductive database,semi-naive evaluation,magic sets,provenance,stable models,defeasible logic,teaching
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Classifier: Development Status :: 3 - Alpha
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Classifier: Intended Audience :: Developers
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Classifier: Intended Audience :: Education
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```sh
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git clone https://github.com/andrewgoodchild/tiny-datalog && cd tiny-datalog
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python3 tests.py #
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python3 tests.py # 246 tests, ~12s
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```
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## Why the language choice decides what you can ask later
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[`conformance/`](https://github.com/andrewgoodchild/tiny-datalog/tree/main/conformance)
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runs the [datalog-conformance](https://pypi.org/project/datalog-conformance/)
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corpus, harvested from Soufflé, Nemo and Crepe, through all four
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strategies
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strategies, and its defeasible theories, from SPINdle and the papers,
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through `defeasible.py`: 195 cases pass. Every skip is named with its
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reason: arithmetic and 10⁵-fact joins, which this course omits on
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purpose, or cases written for a different logic.
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## Learning Datalog
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observe that the literature advises people building Datalog engines
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better than people trying to *use* one; this course does both halves
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on purpose — sixteen lessons where the engine is the explanation, then
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a lesson on authoring rules that survive review
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a lesson on authoring rules that survive review, and one on a logic
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built for rules with exceptions. And it is built to be
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inherited: `git clone`, no dependencies, no hosted anything, and every
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quoted transcript re-verified by CI — the exercises cannot rot. (For where each
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technique ships — CodeQL, RDFox, Feldera, SNOMED and the rest —
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The command-line interface installs too, as `tiny-datalog` (and
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`tiny-datalog-semiring`, `-tabling`, `-incremental`, `-subsumption`,
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`-containment`, `-prolog` for the satellites):
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`-containment`, `-defeasible`, `-prolog` for the satellites):
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```sh
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tiny-datalog -q 'exposed(S, C)' supply-chain.dl
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tabling.py tabled top-down evaluation (iterative QSQR)
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subsumption.py KL-ONE-style EL classifier, compiled to Datalog
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containment.py query containment and minimisation by homomorphism
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defeasible.py defeasible logic: exceptions, priorities, defeaters
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*.py three-line launchers, so `python3 datalog.py ...` works
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straight from a checkout with nothing installed
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programs/ teaching programs, numbered by the lesson that uses
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them (00-* are the README's examples)
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lessons/ getting started, glossary, and lessons 0–
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lessons/ getting started, glossary, and lessons 0–19
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exercises/ worked answers, verified by the test suite
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cases/ golden test cases — add one without writing Python
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conformance/ the external datalog-conformance corpus (Soufflé, Nemo,
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Crepe), run against
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Crepe, SPINdle), run against every evaluation strategy
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benchmarks/ scaled input generators (chain/tree/clique/grid)
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tests.py
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tests.py 246 tests: every shipped program and exercise answer is
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executed, a conformance suite runs every query through
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every applicable strategy, and a seeded fuzzer checks
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the same property on random programs
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### How big is it, honestly
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The evaluator is about 850 lines (`tiny_datalog/datalog.py`, up to the
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command-line interface), the CLI, `--explain` and why-not another 600, and the
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2,
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command-line interface), the CLI, `--explain` and why-not another 600, and the nine satellite modules about
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2,900. Call it 4.3k lines of toolkit and 2.7k of tests, roughly a
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quarter of it commentary.
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"Tiny" is a claim about the evaluator, and about each satellite module
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singly: none of the
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the repository, which is
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singly: none of the nine exceeds 500 lines, which a test asserts. It is not a claim about
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the repository, which is ten modules because it teaches ten things.
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There is no dead code to golf away (checked); shrinking further means
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deleting either a technique or an explanation.
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```sh
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git clone https://github.com/andrewgoodchild/tiny-datalog && cd tiny-datalog
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python3 tests.py #
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python3 tests.py # 246 tests, ~12s
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```
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## Why the language choice decides what you can ask later
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[`conformance/`](https://github.com/andrewgoodchild/tiny-datalog/tree/main/conformance)
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runs the [datalog-conformance](https://pypi.org/project/datalog-conformance/)
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corpus, harvested from Soufflé, Nemo and Crepe, through all four
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strategies
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strategies, and its defeasible theories, from SPINdle and the papers,
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through `defeasible.py`: 195 cases pass. Every skip is named with its
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reason: arithmetic and 10⁵-fact joins, which this course omits on
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purpose, or cases written for a different logic.
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## Learning Datalog
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observe that the literature advises people building Datalog engines
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better than people trying to *use* one; this course does both halves
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on purpose — sixteen lessons where the engine is the explanation, then
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a lesson on authoring rules that survive review
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a lesson on authoring rules that survive review, and one on a logic
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built for rules with exceptions. And it is built to be
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inherited: `git clone`, no dependencies, no hosted anything, and every
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quoted transcript re-verified by CI — the exercises cannot rot. (For where each
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technique ships — CodeQL, RDFox, Feldera, SNOMED and the rest —
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The command-line interface installs too, as `tiny-datalog` (and
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`tiny-datalog-semiring`, `-tabling`, `-incremental`, `-subsumption`,
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`-containment`, `-prolog` for the satellites):
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`-containment`, `-defeasible`, `-prolog` for the satellites):
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```sh
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tiny-datalog -q 'exposed(S, C)' supply-chain.dl
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tabling.py tabled top-down evaluation (iterative QSQR)
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subsumption.py KL-ONE-style EL classifier, compiled to Datalog
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containment.py query containment and minimisation by homomorphism
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defeasible.py defeasible logic: exceptions, priorities, defeaters
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*.py three-line launchers, so `python3 datalog.py ...` works
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straight from a checkout with nothing installed
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programs/ teaching programs, numbered by the lesson that uses
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them (00-* are the README's examples)
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lessons/ getting started, glossary, and lessons 0–
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lessons/ getting started, glossary, and lessons 0–19
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exercises/ worked answers, verified by the test suite
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cases/ golden test cases — add one without writing Python
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conformance/ the external datalog-conformance corpus (Soufflé, Nemo,
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Crepe), run against
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Crepe, SPINdle), run against every evaluation strategy
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benchmarks/ scaled input generators (chain/tree/clique/grid)
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tests.py
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tests.py 246 tests: every shipped program and exercise answer is
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executed, a conformance suite runs every query through
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every applicable strategy, and a seeded fuzzer checks
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the same property on random programs
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### How big is it, honestly
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The evaluator is about 850 lines (`tiny_datalog/datalog.py`, up to the
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command-line interface), the CLI, `--explain` and why-not another 600, and the
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command-line interface), the CLI, `--explain` and why-not another 600, and the nine satellite modules about
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"Tiny" is a claim about the evaluator, and about each satellite module
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the repository, which is
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singly: none of the nine exceeds 500 lines, which a test asserts. It is not a claim about
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the repository, which is ten modules because it teaches ten things.
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deleting either a technique or an explanation.
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[project]
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name = "tiny-datalog"
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version = "0.
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version = "0.2.0"
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description = "A Datalog engine small enough to read in an afternoon"
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readme = "README.md"
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dependencies = []
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keywords = ["datalog", "logic programming", "deductive database",
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"semi-naive evaluation", "magic sets", "provenance",
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"stable models", "teaching"]
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"stable models", "defeasible logic", "teaching"]
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tiny-datalog-subsumption = "tiny_datalog.subsumption:main"
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tiny-datalog-containment = "tiny_datalog.containment:main"
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tiny-datalog-defeasible = "tiny_datalog.defeasible:main"
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[tool.setuptools.packages.find]
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containment),
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"Var", "Const", "Struct", "Atom", "Literal", "Rule",
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"""
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(Lesson 18, which ends with a tour of this module.)
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r1: penguin(X) -> bird(X). % strict: no exceptions, ever
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Conclusions carry four tags (Antoniou, Billington, Governatori & Maher
|
|
26
|
+
2001):
|
|
27
|
+
|
|
28
|
+
+Δ q q is definitely provable: facts and strict rules alone
|
|
29
|
+
−Δ q q is demonstrably not definitely provable
|
|
30
|
+
+∂ q q is defeasibly provable: some applicable rule supports q,
|
|
31
|
+
~q is not definite, and every rule for ~q is either
|
|
32
|
+
inapplicable or beaten by an applicable rule for q
|
|
33
|
+
−∂ q q is demonstrably not defeasibly provable
|
|
34
|
+
|
|
35
|
+
"Demonstrably": a −tag is a finite proof of failure, not the mere
|
|
36
|
+
absence of a +tag. On a loop like `a => b. b => a.` neither +∂ b nor
|
|
37
|
+
−∂ b is ever established, and the module reports b as *undecided* —
|
|
38
|
+
where Lesson 5's well-founded semantics would settle it false, as does
|
|
39
|
+
the well-founded variant of this logic (Maher & Governatori 1999).
|
|
40
|
+
Standard defeasible logic is characterised instead by Kunen's
|
|
41
|
+
three-valued semantics of a logic program that encodes the theory —
|
|
42
|
+
which is why it cannot see that such a loop has no foundation.
|
|
43
|
+
|
|
44
|
+
The proof conditions are implemented one-to-one in `_conclude`, over
|
|
45
|
+
the theory's grounding, as a fixpoint: tags are only ever added, so
|
|
46
|
+
iteration stops. Grounding reuses the core engine. Every rule, read
|
|
47
|
+
as if strict, is a positive Datalog rule, and its least model bounds
|
|
48
|
+
everything a +tag could be about; see `Theory.ground` for the one
|
|
49
|
+
consequence of grounding that way. `--propagating` switches from
|
|
50
|
+
ambiguity blocking to ambiguity propagation (`programs/ambiguity.dfl`
|
|
51
|
+
shows the difference).
|
|
52
|
+
"""
|
|
53
|
+
|
|
54
|
+
import argparse
|
|
55
|
+
import re
|
|
56
|
+
import sys
|
|
57
|
+
from collections import defaultdict
|
|
58
|
+
from itertools import combinations
|
|
59
|
+
|
|
60
|
+
from tiny_datalog.datalog import (
|
|
61
|
+
Atom, DatalogError, Engine, Literal, ParseError, Program, Rule,
|
|
62
|
+
SafetyError, Var, format_atom, match_answers, parse_goal, read_program,
|
|
63
|
+
_sort_key)
|
|
64
|
+
|
|
65
|
+
STRICT, DEFEASIBLE, DEFEATER = "->", "=>", "~>"
|
|
66
|
+
|
|
67
|
+
_TOKEN = re.compile(r"""
|
|
68
|
+
(?P<comment>%[^\n]*) | (?P<space>\s+)
|
|
69
|
+
| (?P<string>"[^"\n]*"|'[^'\n]*')
|
|
70
|
+
| (?P<number>-?[0-9]+(?:\.[0-9]+)?(?:[eE][-+]?[0-9]+)?)
|
|
71
|
+
| (?P<arrow>->|=>|~>) | (?P<punct>[:,.()>~])
|
|
72
|
+
| (?P<name>[A-Za-z_][A-Za-z0-9_]*)
|
|
73
|
+
""", re.VERBOSE)
|
|
74
|
+
|
|
75
|
+
|
|
76
|
+
def complement(lit):
|
|
77
|
+
"""`p` <-> `~p`. A literal is (pred, args); strong negation lives
|
|
78
|
+
in the predicate name, so the core engine stores ~p as a relation
|
|
79
|
+
of its own and never needs to know it is special."""
|
|
80
|
+
pred, args = lit
|
|
81
|
+
return (pred[1:] if pred.startswith("~") else "~" + pred), args
|
|
82
|
+
|
|
83
|
+
|
|
84
|
+
def show(lit):
|
|
85
|
+
return format_atom(*lit)
|
|
86
|
+
|
|
87
|
+
|
|
88
|
+
class Theory:
|
|
89
|
+
"""A parsed defeasible theory: facts, labelled rules, superiority."""
|
|
90
|
+
|
|
91
|
+
def __init__(self):
|
|
92
|
+
self.facts = [] # core Atoms; a ~ fact has pred "~p"
|
|
93
|
+
self.rules = [] # (label, kind, head Atom, body Atoms)
|
|
94
|
+
self.superior = set() # (stronger label, weaker label)
|
|
95
|
+
|
|
96
|
+
# -- reading ------------------------------------------------------------
|
|
97
|
+
|
|
98
|
+
@classmethod
|
|
99
|
+
def parse(cls, text):
|
|
100
|
+
theory = cls()
|
|
101
|
+
tokens = _tokens(text)
|
|
102
|
+
statement = []
|
|
103
|
+
for tok in tokens:
|
|
104
|
+
statement.append(tok)
|
|
105
|
+
if tok[1] == "." and _depth(statement) == 0:
|
|
106
|
+
theory._statement(statement[:-1], tok[2])
|
|
107
|
+
statement = []
|
|
108
|
+
if statement:
|
|
109
|
+
raise ParseError("line %d: expected '.', got end of input"
|
|
110
|
+
% statement[-1][2])
|
|
111
|
+
theory._check()
|
|
112
|
+
return theory
|
|
113
|
+
|
|
114
|
+
def _statement(self, toks, line):
|
|
115
|
+
text = [t[1] for t in toks]
|
|
116
|
+
if len(toks) == 3 and text[1] == ">": # r3 > r2.
|
|
117
|
+
self.superior.add((text[0], text[2]))
|
|
118
|
+
return
|
|
119
|
+
label = None
|
|
120
|
+
if len(toks) > 1 and toks[0][0] == "name" and text[1] == ":":
|
|
121
|
+
label, toks = text[0], toks[2:]
|
|
122
|
+
arrows = [i for i, t in enumerate(toks) if t[0] == "arrow"]
|
|
123
|
+
if not arrows:
|
|
124
|
+
if label is not None:
|
|
125
|
+
raise ParseError("line %d: a labelled statement must be a "
|
|
126
|
+
"rule (->, => or ~>)" % line)
|
|
127
|
+
self.facts.append(_atom(toks, line))
|
|
128
|
+
return
|
|
129
|
+
if len(arrows) > 1:
|
|
130
|
+
raise ParseError("line %d: one arrow per rule" % line)
|
|
131
|
+
i = arrows[0]
|
|
132
|
+
body = [_atom(part, line) for part in _split(toks[:i])]
|
|
133
|
+
head = _atom(toks[i + 1:], line)
|
|
134
|
+
self.rules.append((label or "_r%d" % (len(self.rules) + 1),
|
|
135
|
+
toks[i][1], head, tuple(_fresh_anonymous(body))))
|
|
136
|
+
|
|
137
|
+
def _check(self):
|
|
138
|
+
labels = [r[0] for r in self.rules]
|
|
139
|
+
dup = {l for l in labels if labels.count(l) > 1}
|
|
140
|
+
if dup:
|
|
141
|
+
raise ParseError("rule label used twice: %s" % ", ".join(sorted(dup)))
|
|
142
|
+
for pair in self.superior:
|
|
143
|
+
for l in pair:
|
|
144
|
+
if l not in labels:
|
|
145
|
+
raise ParseError("superiority names unknown rule %s" % l)
|
|
146
|
+
# the superiority relation must be acyclic, or "r beats s"
|
|
147
|
+
# could end up meaning r beats itself
|
|
148
|
+
beats = defaultdict(set)
|
|
149
|
+
for a, b in self.superior:
|
|
150
|
+
beats[a].add(b)
|
|
151
|
+
for start in list(beats):
|
|
152
|
+
stack, seen = list(beats[start]), set()
|
|
153
|
+
while stack:
|
|
154
|
+
x = stack.pop()
|
|
155
|
+
if x == start:
|
|
156
|
+
raise SafetyError("superiority is cyclic through %s"
|
|
157
|
+
% start)
|
|
158
|
+
if x not in seen:
|
|
159
|
+
seen.add(x)
|
|
160
|
+
stack.extend(beats[x])
|
|
161
|
+
|
|
162
|
+
# -- grounding ----------------------------------------------------------
|
|
163
|
+
|
|
164
|
+
def ground(self):
|
|
165
|
+
"""Ground rules (label, kind, head, body) over literals, and the
|
|
166
|
+
set of facts.
|
|
167
|
+
|
|
168
|
+
Every rule is first read as a strict positive Datalog rule; the
|
|
169
|
+
core engine's least model of that program — the *envelope* —
|
|
170
|
+
holds every literal any rule could ever establish. A rule
|
|
171
|
+
instance is kept when its variables can all be bound by body
|
|
172
|
+
literals inside the envelope; the body literals it does not
|
|
173
|
+
match there simply fail. So `p, q => r` with q underivable is
|
|
174
|
+
kept, and r is refuted (−∂) as the proof theory says, while an
|
|
175
|
+
instance no derivable literal could bind at all is never made.
|
|
176
|
+
|
|
177
|
+
That is the one place this departs from the proof theory, which
|
|
178
|
+
ranges over every constant. A loop nothing starts, written with
|
|
179
|
+
variables — `a(X) => b(X). b(X) => a(X).` — is not reported at
|
|
180
|
+
all, where the proof theory would leave each instance undecided.
|
|
181
|
+
Written without variables it needs no binding, is kept, and
|
|
182
|
+
comes out undecided (`programs/loops.dfl`)."""
|
|
183
|
+
rules = [Rule(head, tuple(Literal(b, False) for b in body))
|
|
184
|
+
for _l, _k, head, body in self.rules]
|
|
185
|
+
program = Program([Rule(a, ()) for a in self.facts] + rules)
|
|
186
|
+
arities = defaultdict(set)
|
|
187
|
+
for pred, n in program.arity.items():
|
|
188
|
+
arities[pred.lstrip("~")].add(n)
|
|
189
|
+
for pred, ns in sorted(arities.items()):
|
|
190
|
+
if len(ns) > 1:
|
|
191
|
+
raise SafetyError("predicate %s used with arities %s (its "
|
|
192
|
+
"negation counts too)"
|
|
193
|
+
% (pred, " and ".join(map(str, sorted(ns)))))
|
|
194
|
+
engine = Engine(program)
|
|
195
|
+
engine.run()
|
|
196
|
+
facts = {(a.pred, tuple(x.value for x in a.args)) for a in self.facts}
|
|
197
|
+
ground, seen = [], set()
|
|
198
|
+
for label, kind, head, body in self.rules:
|
|
199
|
+
needed = _variables(body)
|
|
200
|
+
# match every subset of the body that binds all variables
|
|
201
|
+
for n in range(len(body) + 1):
|
|
202
|
+
for part in combinations(body, n):
|
|
203
|
+
if _variables(part) != needed:
|
|
204
|
+
continue
|
|
205
|
+
sub = Rule(head, tuple(Literal(b, False) for b in part))
|
|
206
|
+
for subst in engine._rule_substitutions(sub):
|
|
207
|
+
g = (label, kind,
|
|
208
|
+
(head.pred, engine._instantiate(head, subst)),
|
|
209
|
+
tuple((b.pred, engine._instantiate(b, subst))
|
|
210
|
+
for b in body))
|
|
211
|
+
if g not in seen:
|
|
212
|
+
seen.add(g)
|
|
213
|
+
ground.append(g)
|
|
214
|
+
return facts, ground
|
|
215
|
+
|
|
216
|
+
# -- the proof theory ---------------------------------------------------
|
|
217
|
+
|
|
218
|
+
def conclusions(self, policy="blocking"):
|
|
219
|
+
"""{tag: set of literals} for the tags +Δ, −Δ, +∂, −∂, and
|
|
220
|
+
'undecided' for literals that got neither +∂ nor −∂."""
|
|
221
|
+
if policy not in ("blocking", "propagating"):
|
|
222
|
+
raise DatalogError("unknown policy %r: use 'blocking' or "
|
|
223
|
+
"'propagating'" % (policy,))
|
|
224
|
+
facts, ground = self.ground()
|
|
225
|
+
return _conclude(facts, ground, self.superior, policy)
|
|
226
|
+
|
|
227
|
+
|
|
228
|
+
def _tokens(text):
|
|
229
|
+
"""(kind, text, line) triples; comments and whitespace dropped."""
|
|
230
|
+
tokens, pos = [], 0
|
|
231
|
+
while pos < len(text):
|
|
232
|
+
m = _TOKEN.match(text, pos)
|
|
233
|
+
if m is None:
|
|
234
|
+
raise ParseError("line %d: unexpected character %r"
|
|
235
|
+
% (text.count("\n", 0, pos) + 1, text[pos]))
|
|
236
|
+
if m.lastgroup not in ("space", "comment"):
|
|
237
|
+
tokens.append((m.lastgroup, m.group(),
|
|
238
|
+
text.count("\n", 0, pos) + 1))
|
|
239
|
+
pos = m.end()
|
|
240
|
+
return tokens
|
|
241
|
+
|
|
242
|
+
|
|
243
|
+
def _variables(atoms):
|
|
244
|
+
return {a.name for atom in atoms for a in atom.args if isinstance(a, Var)}
|
|
245
|
+
|
|
246
|
+
|
|
247
|
+
def _depth(toks):
|
|
248
|
+
return sum({"(": 1, ")": -1}.get(t[1], 0) for t in toks)
|
|
249
|
+
|
|
250
|
+
|
|
251
|
+
def _split(toks):
|
|
252
|
+
"""Comma-separated parts at bracket depth 0."""
|
|
253
|
+
parts, cur, depth = [], [], 0
|
|
254
|
+
for t in toks:
|
|
255
|
+
depth += {"(": 1, ")": -1}.get(t[1], 0)
|
|
256
|
+
if t[1] == "," and depth == 0:
|
|
257
|
+
parts.append(cur)
|
|
258
|
+
cur = []
|
|
259
|
+
else:
|
|
260
|
+
cur.append(t)
|
|
261
|
+
return parts + [cur] if cur else parts
|
|
262
|
+
|
|
263
|
+
|
|
264
|
+
def _atom(toks, line):
|
|
265
|
+
"""`[~] atom` -> core Atom, pred prefixed '~' when negated. The atom
|
|
266
|
+
itself goes through the core parser, so constants, strings,
|
|
267
|
+
variables and its error messages are the ones the course knows."""
|
|
268
|
+
if not toks:
|
|
269
|
+
raise ParseError("line %d: expected a literal" % line)
|
|
270
|
+
neg = toks[0][1] == "~"
|
|
271
|
+
toks = toks[1:] if neg else toks
|
|
272
|
+
if not toks or toks[0][0] != "name" or toks[0][1][0].isupper():
|
|
273
|
+
raise ParseError("line %d: expected a literal, got %r"
|
|
274
|
+
% (line, " ".join(t[1] for t in toks) or "nothing"))
|
|
275
|
+
atom = parse_goal(" ".join(t[1] for t in toks))
|
|
276
|
+
return Atom(("~" if neg else "") + atom.pred, atom.args)
|
|
277
|
+
|
|
278
|
+
|
|
279
|
+
def _fresh_anonymous(atoms):
|
|
280
|
+
"""Each literal was parsed on its own, so each numbered its `_`s from
|
|
281
|
+
1; renumber so two `_` in one rule stay two different variables."""
|
|
282
|
+
n = 0
|
|
283
|
+
out = []
|
|
284
|
+
for a in atoms:
|
|
285
|
+
args = []
|
|
286
|
+
for x in a.args:
|
|
287
|
+
if isinstance(x, Var) and x.anonymous:
|
|
288
|
+
n += 1
|
|
289
|
+
x = Var("_#%d" % n)
|
|
290
|
+
args.append(x)
|
|
291
|
+
out.append(Atom(a.pred, tuple(args)))
|
|
292
|
+
return out
|
|
293
|
+
|
|
294
|
+
|
|
295
|
+
def _conclude(facts, ground, superior, policy):
|
|
296
|
+
"""The proof conditions, as a fixpoint (Antoniou, Billington,
|
|
297
|
+
Governatori & Maher 2001). For a literal q, R[q] is every rule for
|
|
298
|
+
q, Rs[q] the strict ones, Rsd[q] strict or defeasible — defeaters
|
|
299
|
+
may attack, never support — and A(r) is rule r's body:
|
|
300
|
+
|
|
301
|
+
+Δq q is a fact, or some r in Rs[q] has A(r) all +Δ.
|
|
302
|
+
−Δq q is not a fact, and every r in Rs[q] has some a in A(r) −Δ.
|
|
303
|
+
+∂q +Δq; or (1) some r in Rsd[q] has A(r) all +∂, (2) ~q is −Δ,
|
|
304
|
+
and (3) every attacker s in R[~q] is either dead — some a in
|
|
305
|
+
A(s) is −∂ — or beaten: some t in Rsd[q] with A(t) all +∂
|
|
306
|
+
and t > s. The t may differ per attacker: team defeat.
|
|
307
|
+
−∂q −Δq, and: every r in Rsd[q] has some a in A(r) −∂; or ~q is
|
|
308
|
+
+Δ; or some attacker s in R[~q] is live — A(s) all +∂ — and
|
|
309
|
+
every t in Rsd[q] has a body literal −∂ or is not above s.
|
|
310
|
+
|
|
311
|
+
That is ambiguity *blocking*: an attacker only counts once its body
|
|
312
|
+
is proved. Under ambiguity *propagation* (Maher 2012) the same
|
|
313
|
+
conditions hold with attackers judged by mere *support*, σ:
|
|
314
|
+
|
|
315
|
+
+σq +Δq, or some r in Rsd[q] has A(r) all +σ, and no attacker
|
|
316
|
+
s in R[~q] with no −∂ body literal is above r.
|
|
317
|
+
−σq −Δq, and every r in Rsd[q] has a body literal −σ, or is
|
|
318
|
+
below some attacker s in R[~q] with A(s) all +∂.
|
|
319
|
+
|
|
320
|
+
and in +∂ an attacker is dead only if a body literal is −σ, while in
|
|
321
|
+
−∂ it is live as soon as A(s) is all +σ. Supported-but-unproved
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+
attackers then still block, so doubt spreads downstream."""
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+
by_head = defaultdict(list)
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+
for rule in ground:
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+
by_head[rule[2]].append(rule)
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+
# report on every literal the theory mentions; decide its complement
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# too, since every +∂ / −∂ condition looks at ~q
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+
mentioned = set(facts) | set(by_head) | {a for r in ground for a in r[3]}
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+
universe = mentioned | {complement(q) for q in mentioned}
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+
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+
def strict(q):
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+
return [r for r in by_head[q] if r[1] == STRICT]
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+
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+
def supporting(q):
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+
return [r for r in by_head[q] if r[1] != DEFEATER]
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+
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+
def body_in(r, tagged):
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+
return all(a in tagged for a in r[3])
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+
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+
def body_hits(r, tagged):
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+
return any(a in tagged for a in r[3])
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+
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+
def above(t, s):
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+
return (t[0], s[0]) in superior
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+
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+
plus_d, minus_d = set(), set() # +Δ, −Δ: the strict part first
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+
changed = True
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+
while changed:
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+
changed = False
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+
for q in universe:
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+
if q not in plus_d and (q in facts or any(
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+
body_in(r, plus_d) for r in strict(q))):
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+
plus_d.add(q)
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+
changed = True
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+
if q not in minus_d and q not in facts and all(
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+
body_hits(r, minus_d) for r in strict(q)):
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+
minus_d.add(q)
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+
changed = True
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+
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+
plus, minus = set(), set() # +∂, −∂
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+
if policy == "propagating":
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+
s_plus, s_minus = set(), set() # +σ, −σ: who is merely supported
|
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+
else:
|
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+
s_plus, s_minus = plus, minus # blocking: support = proof
|
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+
changed = True
|
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+
while changed:
|
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+
changed = False
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+
for q in universe:
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+
nq = complement(q)
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+
attackers = by_head[nq]
|
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|
+
if q not in plus and (q in plus_d or (
|
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|
+
any(body_in(r, plus) for r in supporting(q))
|
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+
and nq in minus_d
|
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+
and all(body_hits(s, s_minus) or any(
|
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+
body_in(t, plus) and above(t, s)
|
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+
for t in supporting(q)) for s in attackers))):
|
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+
plus.add(q)
|
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|
+
changed = True
|
|
379
|
+
if q not in minus and q in minus_d and (
|
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+
all(body_hits(r, minus) for r in supporting(q))
|
|
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|
+
or nq in plus_d
|
|
382
|
+
or any(body_in(s, s_plus) and all(
|
|
383
|
+
body_hits(t, minus) or not above(t, s)
|
|
384
|
+
for t in supporting(q)) for s in attackers)):
|
|
385
|
+
minus.add(q)
|
|
386
|
+
changed = True
|
|
387
|
+
if policy != "propagating":
|
|
388
|
+
continue
|
|
389
|
+
if q not in s_plus and (q in plus_d or any(
|
|
390
|
+
body_in(r, s_plus) and all(
|
|
391
|
+
body_hits(s, minus) or not above(s, r)
|
|
392
|
+
for s in attackers)
|
|
393
|
+
for r in supporting(q))):
|
|
394
|
+
s_plus.add(q)
|
|
395
|
+
changed = True
|
|
396
|
+
if q not in s_minus and q in minus_d and all(
|
|
397
|
+
body_hits(r, s_minus) or any(
|
|
398
|
+
body_in(s, plus) and above(s, r) for s in attackers)
|
|
399
|
+
for r in supporting(q)):
|
|
400
|
+
s_minus.add(q)
|
|
401
|
+
changed = True
|
|
402
|
+
return {"+Δ": plus_d & mentioned, "−Δ": minus_d & mentioned,
|
|
403
|
+
"+∂": plus & mentioned, "−∂": minus & mentioned,
|
|
404
|
+
"undecided": mentioned - plus - minus}
|
|
405
|
+
|
|
406
|
+
|
|
407
|
+
def load(text):
|
|
408
|
+
return Theory.parse(text)
|
|
409
|
+
|
|
410
|
+
|
|
411
|
+
TAG_NAMES = [("+Δ", "definitely"), ("+∂", "defeasibly"),
|
|
412
|
+
("−∂", "not defeasibly"), ("undecided", "undecided")]
|
|
413
|
+
|
|
414
|
+
|
|
415
|
+
def main(argv=None):
|
|
416
|
+
ap = argparse.ArgumentParser(
|
|
417
|
+
description="Defeasible logic: strict rules (->), defeasible rules "
|
|
418
|
+
"(=>), defeaters (~>), superiority (r1 > r2).")
|
|
419
|
+
ap.add_argument("file", help="defeasible theory")
|
|
420
|
+
ap.add_argument("-q", "--query", action="append", default=[],
|
|
421
|
+
metavar="LITERAL",
|
|
422
|
+
help="show the tags of matching literals (repeatable), "
|
|
423
|
+
"e.g. -q 'flies(X)' or -q '~flies(X)'")
|
|
424
|
+
ap.add_argument("--propagating", action="store_true",
|
|
425
|
+
help="ambiguity propagating instead of blocking")
|
|
426
|
+
args = ap.parse_args(argv)
|
|
427
|
+
try:
|
|
428
|
+
theory = load(read_program(args.file))
|
|
429
|
+
result = theory.conclusions(
|
|
430
|
+
"propagating" if args.propagating else "blocking")
|
|
431
|
+
queries = [_atom(_tokens(q.rstrip(". ")), 1) for q in args.query]
|
|
432
|
+
except DatalogError as exc:
|
|
433
|
+
print("error: %s" % exc, file=sys.stderr)
|
|
434
|
+
return 1
|
|
435
|
+
|
|
436
|
+
def ordered(lits):
|
|
437
|
+
return sorted(lits, key=lambda l: (l[0].lstrip("~"), l[0],
|
|
438
|
+
_sort_key(l[1])))
|
|
439
|
+
|
|
440
|
+
if queries:
|
|
441
|
+
for q in queries:
|
|
442
|
+
print("?- %s" % (q.pred if not q.args else "%s(%s)" % (
|
|
443
|
+
q.pred, ", ".join(str(a) for a in q.args))))
|
|
444
|
+
hits = [l for l in ordered(set().union(*result.values()))
|
|
445
|
+
if l[0] == q.pred and match_answers(q, [l[1]])]
|
|
446
|
+
for lit in hits:
|
|
447
|
+
tags = [t for t, _n in TAG_NAMES if lit in result[t]]
|
|
448
|
+
print(" %-28s %s" % (show(lit), " ".join(tags)))
|
|
449
|
+
if not hits:
|
|
450
|
+
print(" (no rule or fact mentions it)")
|
|
451
|
+
return 0
|
|
452
|
+
for tag, name in TAG_NAMES:
|
|
453
|
+
lits = ordered(result[tag])
|
|
454
|
+
print("%s %s (%d)" % (tag, name, len(lits)) if tag != "undecided"
|
|
455
|
+
else "%s (%d)" % (name, len(lits)))
|
|
456
|
+
for lit in lits:
|
|
457
|
+
print(" " + show(lit))
|
|
458
|
+
return 0
|
|
459
|
+
|
|
460
|
+
|
|
461
|
+
if __name__ == "__main__":
|
|
462
|
+
sys.exit(main())
|
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
Metadata-Version: 2.4
|
|
2
2
|
Name: tiny-datalog
|
|
3
|
-
Version: 0.
|
|
3
|
+
Version: 0.2.0
|
|
4
4
|
Summary: A Datalog engine small enough to read in an afternoon
|
|
5
5
|
Author: Andrew Goodchild
|
|
6
6
|
License-Expression: MIT
|
|
@@ -9,7 +9,7 @@ Project-URL: Source, https://github.com/andrewgoodchild/tiny-datalog
|
|
|
9
9
|
Project-URL: Issues, https://github.com/andrewgoodchild/tiny-datalog/issues
|
|
10
10
|
Project-URL: Changelog, https://github.com/andrewgoodchild/tiny-datalog/releases
|
|
11
11
|
Project-URL: Lessons, https://github.com/andrewgoodchild/tiny-datalog/tree/main/lessons
|
|
12
|
-
Keywords: datalog,logic programming,deductive database,semi-naive evaluation,magic sets,provenance,stable models,teaching
|
|
12
|
+
Keywords: datalog,logic programming,deductive database,semi-naive evaluation,magic sets,provenance,stable models,defeasible logic,teaching
|
|
13
13
|
Classifier: Development Status :: 3 - Alpha
|
|
14
14
|
Classifier: Intended Audience :: Developers
|
|
15
15
|
Classifier: Intended Audience :: Education
|
|
@@ -126,7 +126,7 @@ Nothing to install:
|
|
|
126
126
|
|
|
127
127
|
```sh
|
|
128
128
|
git clone https://github.com/andrewgoodchild/tiny-datalog && cd tiny-datalog
|
|
129
|
-
python3 tests.py #
|
|
129
|
+
python3 tests.py # 246 tests, ~12s
|
|
130
130
|
```
|
|
131
131
|
|
|
132
132
|
## Why the language choice decides what you can ask later
|
|
@@ -235,8 +235,10 @@ Answers are also checked against engines this repository did not write.
|
|
|
235
235
|
[`conformance/`](https://github.com/andrewgoodchild/tiny-datalog/tree/main/conformance)
|
|
236
236
|
runs the [datalog-conformance](https://pypi.org/project/datalog-conformance/)
|
|
237
237
|
corpus, harvested from Soufflé, Nemo and Crepe, through all four
|
|
238
|
-
strategies
|
|
239
|
-
|
|
238
|
+
strategies, and its defeasible theories, from SPINdle and the papers,
|
|
239
|
+
through `defeasible.py`: 195 cases pass. Every skip is named with its
|
|
240
|
+
reason: arithmetic and 10⁵-fact joins, which this course omits on
|
|
241
|
+
purpose, or cases written for a different logic.
|
|
240
242
|
|
|
241
243
|
## Learning Datalog
|
|
242
244
|
|
|
@@ -246,7 +248,8 @@ the current research threads. The field's own recent lecture notes
|
|
|
246
248
|
observe that the literature advises people building Datalog engines
|
|
247
249
|
better than people trying to *use* one; this course does both halves
|
|
248
250
|
on purpose — sixteen lessons where the engine is the explanation, then
|
|
249
|
-
a lesson on authoring rules that survive review
|
|
251
|
+
a lesson on authoring rules that survive review, and one on a logic
|
|
252
|
+
built for rules with exceptions. And it is built to be
|
|
250
253
|
inherited: `git clone`, no dependencies, no hosted anything, and every
|
|
251
254
|
quoted transcript re-verified by CI — the exercises cannot rot. (For where each
|
|
252
255
|
technique ships — CodeQL, RDFox, Feldera, SNOMED and the rest —
|
|
@@ -327,7 +330,7 @@ for service, cve in sorted(engine.rels["exposed"]):
|
|
|
327
330
|
|
|
328
331
|
The command-line interface installs too, as `tiny-datalog` (and
|
|
329
332
|
`tiny-datalog-semiring`, `-tabling`, `-incremental`, `-subsumption`,
|
|
330
|
-
`-containment`, `-prolog` for the satellites):
|
|
333
|
+
`-containment`, `-defeasible`, `-prolog` for the satellites):
|
|
331
334
|
|
|
332
335
|
```sh
|
|
333
336
|
tiny-datalog -q 'exposed(S, C)' supply-chain.dl
|
|
@@ -351,17 +354,18 @@ tiny_datalog/ the engine and its satellites — the code you read:
|
|
|
351
354
|
tabling.py tabled top-down evaluation (iterative QSQR)
|
|
352
355
|
subsumption.py KL-ONE-style EL classifier, compiled to Datalog
|
|
353
356
|
containment.py query containment and minimisation by homomorphism
|
|
357
|
+
defeasible.py defeasible logic: exceptions, priorities, defeaters
|
|
354
358
|
*.py three-line launchers, so `python3 datalog.py ...` works
|
|
355
359
|
straight from a checkout with nothing installed
|
|
356
360
|
programs/ teaching programs, numbered by the lesson that uses
|
|
357
361
|
them (00-* are the README's examples)
|
|
358
|
-
lessons/ getting started, glossary, and lessons 0–
|
|
362
|
+
lessons/ getting started, glossary, and lessons 0–19
|
|
359
363
|
exercises/ worked answers, verified by the test suite
|
|
360
364
|
cases/ golden test cases — add one without writing Python
|
|
361
365
|
conformance/ the external datalog-conformance corpus (Soufflé, Nemo,
|
|
362
|
-
Crepe), run against
|
|
366
|
+
Crepe, SPINdle), run against every evaluation strategy
|
|
363
367
|
benchmarks/ scaled input generators (chain/tree/clique/grid)
|
|
364
|
-
tests.py
|
|
368
|
+
tests.py 246 tests: every shipped program and exercise answer is
|
|
365
369
|
executed, a conformance suite runs every query through
|
|
366
370
|
every applicable strategy, and a seeded fuzzer checks
|
|
367
371
|
the same property on random programs
|
|
@@ -375,13 +379,13 @@ used.
|
|
|
375
379
|
### How big is it, honestly
|
|
376
380
|
|
|
377
381
|
The evaluator is about 850 lines (`tiny_datalog/datalog.py`, up to the
|
|
378
|
-
command-line interface), the CLI, `--explain` and why-not another 600, and the
|
|
379
|
-
2,
|
|
382
|
+
command-line interface), the CLI, `--explain` and why-not another 600, and the nine satellite modules about
|
|
383
|
+
2,900. Call it 4.3k lines of toolkit and 2.7k of tests, roughly a
|
|
380
384
|
quarter of it commentary.
|
|
381
385
|
|
|
382
386
|
"Tiny" is a claim about the evaluator, and about each satellite module
|
|
383
|
-
singly: none of the
|
|
384
|
-
the repository, which is
|
|
387
|
+
singly: none of the nine exceeds 500 lines, which a test asserts. It is not a claim about
|
|
388
|
+
the repository, which is ten modules because it teaches ten things.
|
|
385
389
|
|
|
386
390
|
There is no dead code to golf away (checked); shrinking further means
|
|
387
391
|
deleting either a technique or an explanation.
|
|
@@ -1,6 +1,7 @@
|
|
|
1
1
|
[console_scripts]
|
|
2
2
|
tiny-datalog = tiny_datalog.datalog:main
|
|
3
3
|
tiny-datalog-containment = tiny_datalog.containment:main
|
|
4
|
+
tiny-datalog-defeasible = tiny_datalog.defeasible:main
|
|
4
5
|
tiny-datalog-incremental = tiny_datalog.incremental:main
|
|
5
6
|
tiny-datalog-prolog = tiny_datalog.prolog:main
|
|
6
7
|
tiny-datalog-semiring = tiny_datalog.semiring:main
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|