tecio-python 0.1.0__tar.gz → 0.1.1__tar.gz

{tecio_python-0.1.0/tecio_python.egg-info → tecio_python-0.1.1}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: tecio-python
-Version: 0.1.0
+Version: 0.1.1
 Summary: Python interface for reading and writing Tecplot data files
 Project-URL: Homepage, https://github.com/meersman/tecio
 Project-URL: Documentation, https://meersman.github.io/tecio/
@@ -38,6 +38,8 @@ Requires-Dist: sphinx>=7.0; extra == "docs"
 Requires-Dist: sphinx-book-theme>=1.1; extra == "docs"
 Requires-Dist: sphinx-autodoc-typehints>=2.0; extra == "docs"
 Requires-Dist: myst-parser>=3.0; extra == "docs"
+Provides-Extra: mat
+Requires-Dist: scipy; extra == "mat"
 Dynamic: license-file
 
 # tecio
@@ -53,10 +55,10 @@ Python interface for reading and writing Tecplot data files.
 
 ## Overview
 
-`tecio` wraps Tecplot's TecIO C library to provide a Python API for
-reading and writing Tecplot binary formats (`.szplt`, `.plt`) and ASCII
-(`.dat`). It also includes command-line tools for common file operations
-such as converting formats, extracting zones, and computing statistics.
+`tecio` wraps Tecplot's TecIO C library to provide a Python API for reading
+and writing Tecplot binary formats (`.szplt`, `.plt`) and ASCII (`.dat`). It
+also includes command-line tools for common file operations such as converting
+formats, extracting zones, and computing statistics.
 
 **Requirements:** Python 3.10+, NumPy, Tecplot 360 (or the standalone TecIO library)
 
@@ -70,9 +72,8 @@ pip install tecio-python
 
 The TecIO shared library (`libtecio.so` / `libtecio.dylib`) is not bundled
 with this package and must be provided separately via a Tecplot 360
-installation or the standalone TecIO library. Set the `TECIO_LIB`
-environment variable to point to the library if it is not on your system
-path:
+installation or the standalone TecIO library. Set the `TECIO_LIB` environment
+variable to point to the library if it is not on your system path:
 
 ```bash
 export TECIO_LIB=/path/to/libtecio.so     # Linux
@@ -99,6 +100,8 @@ with tecio.open("sine.szplt", "r") as tec:
     print(tec.variables)   # ['x', 'y']
     x = tec.zone[0].variable[0].values
     y = tec.zone[0].variable[1].values
+    # or
+    x, y = tec.zone[0].get_array(["x", "y"])
 ```
 
 ## API

{tecio_python-0.1.0 → tecio_python-0.1.1}/README.md

@@ -11,10 +11,10 @@ Python interface for reading and writing Tecplot data files.
 
 ## Overview
 
-`tecio` wraps Tecplot's TecIO C library to provide a Python API for
-reading and writing Tecplot binary formats (`.szplt`, `.plt`) and ASCII
-(`.dat`). It also includes command-line tools for common file operations
-such as converting formats, extracting zones, and computing statistics.
+`tecio` wraps Tecplot's TecIO C library to provide a Python API for reading
+and writing Tecplot binary formats (`.szplt`, `.plt`) and ASCII (`.dat`). It
+also includes command-line tools for common file operations such as converting
+formats, extracting zones, and computing statistics.
 
 **Requirements:** Python 3.10+, NumPy, Tecplot 360 (or the standalone TecIO library)
 
@@ -28,9 +28,8 @@ pip install tecio-python
 
 The TecIO shared library (`libtecio.so` / `libtecio.dylib`) is not bundled
 with this package and must be provided separately via a Tecplot 360
-installation or the standalone TecIO library. Set the `TECIO_LIB`
-environment variable to point to the library if it is not on your system
-path:
+installation or the standalone TecIO library. Set the `TECIO_LIB` environment
+variable to point to the library if it is not on your system path:
 
 ```bash
 export TECIO_LIB=/path/to/libtecio.so     # Linux
@@ -57,6 +56,8 @@ with tecio.open("sine.szplt", "r") as tec:
     print(tec.variables)   # ['x', 'y']
     x = tec.zone[0].variable[0].values
     y = tec.zone[0].variable[1].values
+    # or
+    x, y = tec.zone[0].get_array(["x", "y"])
 ```
 
 ## API

{tecio_python-0.1.0 → tecio_python-0.1.1}/pyproject.toml

@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
 
 [project]
 name = "tecio-python"
-version = "0.1.0"
+version = "0.1.1"
 description = "Python interface for reading and writing Tecplot data files"
 
 readme = "README.md"
@@ -45,6 +45,7 @@ tecmerge = "tecio.cli.tecmerge:main"
 tecscale = "tecio.cli.tecscale:main"
 tecslice = "tecio.cli.tecslice:main"
 tecstats = "tecio.cli.tecstats:main"
+tec2mat = "tecio.cli.tec2mat:main"
 
 [project.optional-dependencies]
 dev = [
@@ -61,6 +62,7 @@ docs = [
     "sphinx-autodoc-typehints>=2.0",
     "myst-parser>=3.0",
 ]
+mat = ["scipy"]
 
 [tool.setuptools.packages.find]
 include = ["tecio*"]

{tecio_python-0.1.0 → tecio_python-0.1.1}/tecio/__init__.py

@@ -12,12 +12,15 @@ except metadata.PackageNotFoundError:
     __version__ = "0.0.0"
 
 from . import cli, dat, libtecio, plt, szl, utils
+from ._containers import VariableList, ZoneList
 from ._io import AppendReadWrite, AppendWrite, open
 
 # Ensure tecio.open displays as the canonical public name in docs and help().
 open.__module__ = "tecio"
 AppendWrite.__module__ = "tecio"
 AppendReadWrite.__module__ = "tecio"
+ZoneList.__module__ = "tecio"
+VariableList.__module__ = "tecio"
 
 __all__ = [
     "libtecio",
@@ -29,5 +32,7 @@ __all__ = [
     "cli",
     "AppendWrite",
     "AppendReadWrite",
+    "ZoneList",
+    "VariableList",
     "__version__",
 ]

tecio_python-0.1.1/tecio/_containers.py

@@ -0,0 +1,290 @@
+"""Index- and name-based container types for Tecplot data collections.
+
+These containers are shared by the ``tecio`` readers: ``Read.zone`` returns a
+:class:`ZoneList` of ``ReadZone`` and ``ReadZone.variable`` returns a
+:class:`VariableList` of ``ReadVariable`` for every supported format (SZL, PLT, DAT).
+They depend only on small structural protocols (``.name`` for variables, ``.variable``
+for zones) so they import nothing from either hierarchy and cannot introduce a circular
+dependency.
+
+Access model:
+
+    reader.zone                  # ZoneList
+    reader.zone[0]               # ReadZone            (element)
+    reader.zone[1:4]             # ZoneList            (sub-collection, same kind)
+    reader.zone[0].variable      # VariableList
+    reader.zone[0].variable["x"] # ReadVariable        (object: .values, .is_passive)
+    reader.zone[0].variable[2]   # ReadVariable        (0-based index)
+
+Subscripting always returns an element or a sub-collection *of the same kind* (never a
+raw array). The underlying NumPy data is pulled with ``get_array`` on a single zone,
+which mirrors the pandas ``df[...]`` split: a scalar key returns one array, a list of
+names returns a tuple of arrays (for unpacking)::
+
+    p = reader.zone[0].get_array("p")  # ndarray | None
+    p = reader.zone[0].get_array(2)  # ndarray | None  (0-based index)
+    x, y, z = reader.zone[0].get_array(["x", "y", "z"])  # tuple, one per name
+
+There is deliberately **no** cross-zone array accessor. To pull one variable across
+many zones (e.g. a transient sequence), iterate explicitly so the outer axis is owned by
+your code, and stack only when you know the result is rectangular::
+
+    seq = [z.get_array("p") for z in reader.zone]  # list[ndarray | None]
+    stack = np.stack(seq)  # only if shapes all match
+
+Name lookup is exact and case-sensitive throughout, so distinct variables such
+as ``"x"`` (a local coordinate) and ``"X"`` (a global coordinate) never
+collide, and names that are not valid Python identifiers (``"X [ft]"``,
+``"p'"``) resolve like any other key.
+
+Note:
+    ``get_array`` returns ``None`` for passive or shared variables, mirroring
+    ``ReadVariable.values``. A list of length 1 (``get_array(["p"])``) returns a 1-tuple
+    ``(array,)``, not a bare array, sequence-in always yields tuple-out, matching
+    ``df[["x"]]`` staying 2-D. A missing variable *name* raises ``KeyError``; an
+    out-of-range *index* raises ``IndexError``.
+"""
+
+from __future__ import annotations
+
+from collections.abc import Iterator
+from typing import Any, Generic, Protocol, TypeVar, overload
+
+import numpy as np
+import numpy.typing as npt
+
+# --------------------------------------------------------------------------------------
+# Structural protocols
+# --------------------------------------------------------------------------------------
+
+
+class _HasName(Protocol):
+    """Minimal protocol satisfied by every format's variable element."""
+
+    @property
+    def name(self) -> str: ...
+
+
+class _HasNameAndValues(Protocol):
+    """A variable element that can surface both its name and its data array."""
+
+    @property
+    def name(self) -> str: ...
+    @property
+    def values(self) -> npt.NDArray | None: ...
+
+
+class _HasVariableList(Protocol):
+    """A zone element exposing a name/index-addressable variable container."""
+
+    @property
+    def variable(self) -> VariableList[Any]: ...
+
+
+_VarT = TypeVar("_VarT", bound=_HasName)
+_ZoneT = TypeVar("_ZoneT", bound=_HasVariableList)
+
+
+# ---------------------------------------------------------------------------
+# Shared dispatch helper
+# ---------------------------------------------------------------------------
+
+
+@overload
+def select_variable_arrays(
+    variables: VariableList[Any], key: int | str
+) -> npt.NDArray | None: ...
+@overload
+def select_variable_arrays(
+    variables: VariableList[Any], key: list[str]
+) -> tuple[npt.NDArray | None, ...]: ...
+
+
+def select_variable_arrays(
+    variables: VariableList[Any],
+    key: int | str | list[str],
+) -> npt.NDArray | None | tuple[npt.NDArray | None, ...]:
+    """Resolve *key* against *variables* and return the underlying array(s).
+
+    Backs ``ReadZone.get_array`` (and any future ``Zone.get_array``) so the
+    scalar-vs-sequence dispatch is defined exactly once.
+
+    Args:
+        variables: The zone's :class:`VariableList`.
+        key: A single 0-based index or exact name (→ one array), or a list of exact
+            names (→ a tuple of arrays, in the order given).
+
+    Returns:
+        One array (or ``None`` for a passive/shared variable) for a scalar key; a tuple
+        of such arrays for a list of names.
+
+    Raises:
+        KeyError:   If a name does not exist.
+        IndexError: If an index is out of range.
+    """
+    if isinstance(key, np.integer):
+        key = int(key)
+    if isinstance(key, (str, int)):
+        return variables[key].values
+    return tuple(variables[k].values for k in key)
+
+
+# ======================================================================================
+# VariableList
+# ======================================================================================
+
+
+class VariableList(Generic[_VarT]):
+    """Read-only sequence of variables with positional *and* named access.
+
+    Drop-in for the ``list`` previously returned by ``ReadZone.variable``:
+    iteration, ``len()``, and integer indexing are unchanged.  A string key
+    resolves a variable by its exact, case-sensitive name.
+
+    Subscripting returns the variable *object*; use its ``.values`` (or the
+    zone's ``get_array``) to obtain the underlying array.
+
+    Args:
+        variables: Ordered list of variable elements (each exposing ``.name``).
+
+    Note:
+        If two variables share a name (rare), the first occurrence wins for
+        name-based lookup.
+    """
+
+    __slots__ = ("_items", "_name_index")
+
+    def __init__(self, variables: list[_VarT]) -> None:
+        self._items: list[_VarT] = variables
+        # Built lazily on first name lookup so purely positional use pays no
+        # cost.  For SZL this also avoids issuing a C call per variable name
+        # until a name is actually requested.
+        self._name_index: dict[str, int] | None = None
+
+    def _index(self) -> dict[str, int]:
+        """Return (building once) the ``name -> position`` lookup table."""
+        if self._name_index is None:
+            index: dict[str, int] = {}
+            for i, var in enumerate(self._items):
+                index.setdefault(var.name, i)  # first occurrence wins
+            self._name_index = index
+        return self._name_index
+
+    def __len__(self) -> int:
+        return len(self._items)
+
+    def __iter__(self) -> Iterator[_VarT]:
+        return iter(self._items)
+
+    def __getitem__(self, key: int | str) -> _VarT:
+        """Return a variable object by 0-based index or exact name.
+
+        Args:
+            key: A 0-based integer index or an exact, case-sensitive variable
+                name.
+
+        Returns:
+            The matching variable element.
+
+        Raises:
+            KeyError:   If *key* is a name that does not exist.
+            IndexError: If *key* is an out-of-range index.
+        """
+        if isinstance(key, str):
+            try:
+                return self._items[self._index()[key]]
+            except KeyError:
+                raise KeyError(
+                    f"No variable named {key!r}. Available: {self.names()}"
+                ) from None
+        return self._items[key]
+
+    def __contains__(self, key: object) -> bool:
+        if isinstance(key, str):
+            return key in self._index()
+        return key in self._items
+
+    def names(self) -> list[str]:
+        """Return the variable names in dataset order."""
+        return [var.name for var in self._items]
+
+    def __repr__(self) -> str:
+        n = len(self._items)
+        if n == 0:
+            return "VariableList([])"
+        head = 20
+        lines = [f"    {v!r}," for v in self._items[:head]]
+        if n > head:
+            more = n - head
+            lines.append(f"    ... and {more} more variable{'' if more == 1 else 's'},")
+        body = "\n".join(lines)
+        return f"VariableList([\n{body}\n])"
+
+
+# ======================================================================================
+# ZoneList
+# ======================================================================================
+
+
+class ZoneList(Generic[_ZoneT]):
+    """Read-only sequence of zones: positional access and slicing only.
+
+    Drop-in for the ``list`` previously returned by ``Read.zone``: iteration, ``len()``,
+    and integer indexing are unchanged. Slicing returns another :class:`ZoneList` (not a
+    plain ``list``) so navigation composes.
+
+    This container deliberately exposes **no** data-extraction method. Pulling one
+    variable across many zones is an explicit loop over the zones, keeping the outer
+    (zone) axis owned by the caller (see the module docs).
+
+    Args:
+        zones: Ordered list of zone elements (each exposing ``.variable``).
+    """
+
+    __slots__ = ("_items",)
+
+    def __init__(self, zones: list[_ZoneT]) -> None:
+        self._items: list[_ZoneT] = zones
+
+    def __len__(self) -> int:
+        return len(self._items)
+
+    def __iter__(self) -> Iterator[_ZoneT]:
+        return iter(self._items)
+
+    def __contains__(self, item: object) -> bool:
+        return item in self._items
+
+    @overload
+    def __getitem__(self, key: int) -> _ZoneT: ...
+    @overload
+    def __getitem__(self, key: slice) -> ZoneList[_ZoneT]: ...
+
+    def __getitem__(self, key: int | slice) -> _ZoneT | ZoneList[_ZoneT]:
+        """Index a single zone or slice a sub-collection of zones.
+
+        Args:
+            key: A 0-based zone index, or a ``slice``.
+
+        Returns:
+            A zone element (``int`` key) or a new :class:`ZoneList` (``slice``
+            key).
+
+        Raises:
+            IndexError: If an integer *key* is out of range.
+        """
+        if isinstance(key, slice):
+            return ZoneList(self._items[key])
+        return self._items[key]
+
+    def __repr__(self) -> str:
+        n = len(self._items)
+        if n == 0:
+            return "ZoneList([])"
+        head = 5
+        lines = [f"    {z!r}," for z in self._items[:head]]
+        if n > head:
+            more = n - head
+            lines.append(f"    ... and {more} more zone{'' if more == 1 else 's'},")
+        body = "\n".join(lines)
+        return f"ZoneList([\n{body}\n])"