tablassert 7.4.5__tar.gz → 7.4.7__tar.gz

{tablassert-7.4.5 → tablassert-7.4.7}/CHANGELOG.md

@@ -2,6 +2,16 @@
 
 All notable changes to this project are documented in this file.
 
+## 7.4.7 - 2026-05-11
+
+### Changes
+- Added `Provenance.is_valid_pmc_id` model validator in `models.py` that enforces `publication` starts with `PMC` followed by digits when `repo` is `PMC` (`Repositories.PUBMED_CENTRAL`). The constraint was previously documented in 7.3.6 but only now enforced at parse time.
+
+## 7.4.6 - 2026-05-11
+
+### Changes
+- Relaxed `BaseSource.is_real_url` validator in `models.py` to ignore `403 Forbidden` responses from `httpx.head()`. Some upstreams reject anonymous `HEAD` probes with 403 even though the URL itself is well-formed and reachable, so 403 no longer fails config validation.
+
 ## 7.4.5 - 2026-05-11
 
 ### Changes

{tablassert-7.4.5 → tablassert-7.4.7}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: tablassert
-Version: 7.4.5
+Version: 7.4.7
 Summary: Extract knowledge assertions from tabular data into NCATS Translator-compliant KGX NDJSON — declaratively, with entity resolution and quality control built in.
 Project-URL: Homepage, https://github.com/SkyeAv/Tablassert
 Project-URL: Source, https://github.com/SkyeAv/Tablassert

tablassert-7.4.7/docs/changelog.md

@@ -0,0 +1,13 @@
+# Changelog
+
+The canonical release history lives in the repository root at [`CHANGELOG.md`](https://github.com/SkyeAv/Tablassert/blob/main/CHANGELOG.md).
+
+## Current Release Notes
+
+## 7.4.7 - 2026-05-11
+
+### Changes
+
+- Added an `is_valid_pmc_id` model validator on `Provenance` that enforces `publication` starts with `PMC` followed by digits when `repo` is `PMC`. The constraint was previously documented in 7.3.6 but only now enforced at parse time.
+
+For older releases and the full project history, open the root `CHANGELOG.md` in the repository.

{tablassert-7.4.5 → tablassert-7.4.7}/pyproject.toml

@@ -1,6 +1,6 @@
 [project]
 name = "tablassert"
-version = "7.4.5"
+version = "7.4.7"
 description = "Extract knowledge assertions from tabular data into NCATS Translator-compliant KGX NDJSON — declaratively, with entity resolution and quality control built in."
 authors = [
     { name = "Skye Lane Goetz", email = "sgoetz@isbscience.org" }

{tablassert-7.4.5 → tablassert-7.4.7}/src/tablassert/models.py

@@ -91,7 +91,7 @@ class BaseSource(TablaBase):
         @URL_CACHE.memoize()
         def check_url(s: str, timeout: float = 15.0) -> None:
             r: Any = httpx.head(s, timeout=timeout, follow_redirects=True)
-            if 400 <= r.status_code < 500:
+            if 400 <= r.status_code < 500 and r.status_code != 403:
                 r.raise_for_status()
 
         try:
@@ -290,6 +290,17 @@ class Provenance(TablaBase):
         description="Repository-local publication id appended as repo:publication.",
         examples=["12345678", "PMC1234567"],
     )
+
+    @model_validator(mode="after")
+    def is_valid_pmc_id(self: Self) -> Self:
+        if eq(self.repo, Repositories.PUBMED_CENTRAL):
+            publication: str = self.publication
+            if not re.search(r"^PMC\d+", publication):
+                msg: str = f"20 | pubmed central publications must start with PMC, got {publication}"
+                raise ValueError(msg)
+
+        return self
+
     contributors: list[Contributor] = Field(..., description="Contributor records embedded in output provenance.")
 
 

{tablassert-7.4.5 → tablassert-7.4.7}/uv.lock

@@ -2360,7 +2360,7 @@ wheels = [
 
 [[package]]
 name = "tablassert"
-version = "7.4.5"
+version = "7.4.7"
 source = { editable = "." }
 dependencies = [
     { name = "cyclopts" },

tablassert-7.4.5/docs/changelog.md

@@ -1,15 +0,0 @@
-# Changelog
-
-The canonical release history lives in the repository root at [`CHANGELOG.md`](https://github.com/SkyeAv/Tablassert/blob/main/CHANGELOG.md).
-
-## Current Release Notes
-
-## 7.4.5 - 2026-05-11
-
-### Changes
-
-- Cached `url` field validator results in `BaseSource` to a `diskcache.Cache` stored at `.cachassert/`, so repeated config parses skip redundant `httpx.head()` round-trips against unchanged URLs.
-- Increased the `httpx.head()` timeout in the `url` validator from 5.0s to 15.0s to further tolerate slower upstreams.
-- Added `diskcache` as a runtime dependency.
-
-For older releases and the full project history, open the root `CHANGELOG.md` in the repository.