tablassert 7.4.2__tar.gz → 7.4.3__tar.gz

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Files changed (64) hide show
  1. {tablassert-7.4.2 → tablassert-7.4.3}/CHANGELOG.md +5 -0
  2. {tablassert-7.4.2 → tablassert-7.4.3}/PKG-INFO +1 -1
  3. tablassert-7.4.3/docs/changelog.md +13 -0
  4. {tablassert-7.4.2 → tablassert-7.4.3}/pyproject.toml +1 -1
  5. {tablassert-7.4.2 → tablassert-7.4.3}/src/tablassert/lib.py +3 -3
  6. {tablassert-7.4.2 → tablassert-7.4.3}/uv.lock +1 -1
  7. tablassert-7.4.2/docs/changelog.md +0 -20
  8. {tablassert-7.4.2 → tablassert-7.4.3}/.github/workflows/autotag.yml +0 -0
  9. {tablassert-7.4.2 → tablassert-7.4.3}/.github/workflows/docker.yml +0 -0
  10. {tablassert-7.4.2 → tablassert-7.4.3}/.github/workflows/docs.yml +0 -0
  11. {tablassert-7.4.2 → tablassert-7.4.3}/.github/workflows/pipy.yml +0 -0
  12. {tablassert-7.4.2 → tablassert-7.4.3}/.gitignore +0 -0
  13. {tablassert-7.4.2 → tablassert-7.4.3}/.pre-commit-config.yaml +0 -0
  14. {tablassert-7.4.2 → tablassert-7.4.3}/AGENTS.md +0 -0
  15. {tablassert-7.4.2 → tablassert-7.4.3}/CITATION.cff +0 -0
  16. {tablassert-7.4.2 → tablassert-7.4.3}/CONTRIBUTING.md +0 -0
  17. {tablassert-7.4.2 → tablassert-7.4.3}/Dockerfile +0 -0
  18. {tablassert-7.4.2 → tablassert-7.4.3}/LICENSE +0 -0
  19. {tablassert-7.4.2 → tablassert-7.4.3}/README.md +0 -0
  20. {tablassert-7.4.2 → tablassert-7.4.3}/docs/api/fullmap.md +0 -0
  21. {tablassert-7.4.2 → tablassert-7.4.3}/docs/api/lib.md +0 -0
  22. {tablassert-7.4.2 → tablassert-7.4.3}/docs/api/qc.md +0 -0
  23. {tablassert-7.4.2 → tablassert-7.4.3}/docs/api/utils.md +0 -0
  24. {tablassert-7.4.2 → tablassert-7.4.3}/docs/cli.md +0 -0
  25. {tablassert-7.4.2 → tablassert-7.4.3}/docs/configuration/advanced-example.md +0 -0
  26. {tablassert-7.4.2 → tablassert-7.4.3}/docs/configuration/graph.md +0 -0
  27. {tablassert-7.4.2 → tablassert-7.4.3}/docs/configuration/table.md +0 -0
  28. {tablassert-7.4.2 → tablassert-7.4.3}/docs/datassert.md +0 -0
  29. {tablassert-7.4.2 → tablassert-7.4.3}/docs/docker.md +0 -0
  30. {tablassert-7.4.2 → tablassert-7.4.3}/docs/examples/tutorial-data.csv +0 -0
  31. {tablassert-7.4.2 → tablassert-7.4.3}/docs/examples/tutorial-graph.yaml +0 -0
  32. {tablassert-7.4.2 → tablassert-7.4.3}/docs/examples/tutorial-table.yaml +0 -0
  33. {tablassert-7.4.2 → tablassert-7.4.3}/docs/examples.md +0 -0
  34. {tablassert-7.4.2 → tablassert-7.4.3}/docs/index.md +0 -0
  35. {tablassert-7.4.2 → tablassert-7.4.3}/docs/installation.md +0 -0
  36. {tablassert-7.4.2 → tablassert-7.4.3}/docs/tutorial.md +0 -0
  37. {tablassert-7.4.2 → tablassert-7.4.3}/llms.txt +0 -0
  38. {tablassert-7.4.2 → tablassert-7.4.3}/mkdocs.yml +0 -0
  39. {tablassert-7.4.2 → tablassert-7.4.3}/src/tablassert/__init__.py +0 -0
  40. {tablassert-7.4.2 → tablassert-7.4.3}/src/tablassert/cli.py +0 -0
  41. {tablassert-7.4.2 → tablassert-7.4.3}/src/tablassert/downloader.py +0 -0
  42. {tablassert-7.4.2 → tablassert-7.4.3}/src/tablassert/enums.py +0 -0
  43. {tablassert-7.4.2 → tablassert-7.4.3}/src/tablassert/fullmap.py +0 -0
  44. {tablassert-7.4.2 → tablassert-7.4.3}/src/tablassert/ingests.py +0 -0
  45. {tablassert-7.4.2 → tablassert-7.4.3}/src/tablassert/log.py +0 -0
  46. {tablassert-7.4.2 → tablassert-7.4.3}/src/tablassert/models.py +0 -0
  47. {tablassert-7.4.2 → tablassert-7.4.3}/src/tablassert/nlp.py +0 -0
  48. {tablassert-7.4.2 → tablassert-7.4.3}/src/tablassert/progress.py +0 -0
  49. {tablassert-7.4.2 → tablassert-7.4.3}/src/tablassert/qc.py +0 -0
  50. {tablassert-7.4.2 → tablassert-7.4.3}/src/tablassert/utils.py +0 -0
  51. {tablassert-7.4.2 → tablassert-7.4.3}/tests/__init__.py +0 -0
  52. {tablassert-7.4.2 → tablassert-7.4.3}/tests/conftest.py +0 -0
  53. {tablassert-7.4.2 → tablassert-7.4.3}/tests/fixtures/invalid_section_missing_source.yaml +0 -0
  54. {tablassert-7.4.2 → tablassert-7.4.3}/tests/fixtures/minimal_section.yaml +0 -0
  55. {tablassert-7.4.2 → tablassert-7.4.3}/tests/fixtures/minimal_section_with_sections.yaml +0 -0
  56. {tablassert-7.4.2 → tablassert-7.4.3}/tests/test_downloader.py +0 -0
  57. {tablassert-7.4.2 → tablassert-7.4.3}/tests/test_enums.py +0 -0
  58. {tablassert-7.4.2 → tablassert-7.4.3}/tests/test_fullmap.py +0 -0
  59. {tablassert-7.4.2 → tablassert-7.4.3}/tests/test_ingests.py +0 -0
  60. {tablassert-7.4.2 → tablassert-7.4.3}/tests/test_lib.py +0 -0
  61. {tablassert-7.4.2 → tablassert-7.4.3}/tests/test_models.py +0 -0
  62. {tablassert-7.4.2 → tablassert-7.4.3}/tests/test_nlp.py +0 -0
  63. {tablassert-7.4.2 → tablassert-7.4.3}/tests/test_qc.py +0 -0
  64. {tablassert-7.4.2 → tablassert-7.4.3}/tests/test_utils.py +0 -0
@@ -2,6 +2,11 @@
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  All notable changes to this project are documented in this file.
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+ ## 7.4.3 - 2026-05-11
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+
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+ ### Bug Fixes
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+ - Fixed `compile_graph()` in `lib.py` stripping the final version segment from output paths. `Path(f"./{name}_{version}")` treated the trailing `.N` of a semver version (e.g. `.3` in `7.4.3`) as a suffix, so `with_suffix(".edges.ndjson.temp")` replaced the version segment instead of appending. Base path now carries a `.tmp` sentinel suffix (`Path(f"./{name}_{version}.tmp")`) that `with_suffix()` replaces, preserving the full version in emitted filenames. Temp suffixes also shortened from `.temp` to `.tmp` for consistency.
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  ## 7.4.2 - 2026-05-07
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  ### Changes
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: tablassert
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- Version: 7.4.2
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+ Version: 7.4.3
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  Summary: Extract knowledge assertions from tabular data into NCATS Translator-compliant KGX NDJSON — declaratively, with entity resolution and quality control built in.
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  Project-URL: Homepage, https://github.com/SkyeAv/Tablassert
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  Project-URL: Source, https://github.com/SkyeAv/Tablassert
@@ -0,0 +1,13 @@
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+ # Changelog
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+
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+ The canonical release history lives in the repository root at [`CHANGELOG.md`](https://github.com/SkyeAv/Tablassert/blob/main/CHANGELOG.md).
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+
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+ ## Current Release Notes
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+
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+ ## 7.4.3 - 2026-05-11
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+
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+ ### Bug Fixes
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+
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+ - Fixed `compile_graph()` emitting output paths with the trailing semver segment stripped (e.g. `tablassert_7.4` instead of `tablassert_7.4.3`). `Path.with_suffix()` treated the version's final `.N` as the path suffix; the base path now carries a `.tmp` sentinel that gets replaced instead. Temp suffixes also normalized from `.temp` to `.tmp`.
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+ For older releases and the full project history, open the root `CHANGELOG.md` in the repository.
@@ -1,6 +1,6 @@
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  [project]
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  name = "tablassert"
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- version = "7.4.2"
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+ version = "7.4.3"
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  description = "Extract knowledge assertions from tabular data into NCATS Translator-compliant KGX NDJSON — declaratively, with entity resolution and quality control built in."
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  authors = [
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  { name = "Skye Lane Goetz", email = "sgoetz@isbscience.org" }
@@ -443,13 +443,13 @@ def dedup_stream(p_in: Path, is_edges: bool) -> None:
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  def compile_graph(subgraphs: list[Path], name: str, version: str, fmt: str = "mixed", precision: int = 4) -> None:
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  # ? Aggregates Parquets For NDJSON KGX Export Using Lazy Scan
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- p: Path = Path(f"./{name}_{version}")
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+ p: Path = Path(f"./{name}_{version}.tmp")
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- e: Path = p.with_suffix(".edges.ndjson.temp") # ! For Labeling
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+ e: Path = p.with_suffix(".edges.ndjson.tmp") # ! For Labeling
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  if e.exists():
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  e.unlink()
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- n: Path = p.with_suffix(".nodes.ndjson.temp")
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+ n: Path = p.with_suffix(".nodes.ndjson.tmp")
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  if n.exists():
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  n.unlink()
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@@ -2351,7 +2351,7 @@ wheels = [
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  [[package]]
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  name = "tablassert"
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- version = "7.4.2"
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+ version = "7.4.3"
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  source = { editable = "." }
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  dependencies = [
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  { name = "cyclopts" },
@@ -1,20 +0,0 @@
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- # Changelog
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-
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- The canonical release history lives in the repository root at [`CHANGELOG.md`](https://github.com/SkyeAv/Tablassert/blob/main/CHANGELOG.md).
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-
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- ## Current Release Notes
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-
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- ## 7.4.2 - 2026-05-07
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-
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- ### Changes
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- - Added Pydantic field and model validators to `models.py` that catch misconfigurations at parse time: unreachable `url` fields, mutually exclusive `rows`/`row_slice`, mismatched `Reindex` comparator types, non–Excel-style column letters under `method: column`, Polars-incompatible `regex`/`remove` patterns, and `annotation` name normalization (underscores → spaces).
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- - Changed `rows` and `row_slice` element type from `NonNegativeInt` to `PositiveInt`.
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-
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- ## 7.4.1 - 2026-05-05
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-
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- ### Bug Fixes
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-
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- - Fixed crash in the BUILDING TCODE progress display caused by `format_section_oneline()` calling `.value` on `Tcode.status`, which is a plain string under `use_enum_values=True`.
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- For older releases and the full project history, open the root `CHANGELOG.md` in the repository.
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