tablassert 7.4.11__tar.gz → 7.4.12__tar.gz

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Files changed (64) hide show
  1. {tablassert-7.4.11 → tablassert-7.4.12}/CHANGELOG.md +5 -0
  2. {tablassert-7.4.11 → tablassert-7.4.12}/PKG-INFO +1 -1
  3. tablassert-7.4.12/docs/changelog.md +11 -0
  4. {tablassert-7.4.11 → tablassert-7.4.12}/pyproject.toml +1 -1
  5. tablassert-7.4.11/docs/changelog.md +0 -11
  6. {tablassert-7.4.11 → tablassert-7.4.12}/.github/workflows/autotag.yml +0 -0
  7. {tablassert-7.4.11 → tablassert-7.4.12}/.github/workflows/docker.yml +0 -0
  8. {tablassert-7.4.11 → tablassert-7.4.12}/.github/workflows/docs.yml +0 -0
  9. {tablassert-7.4.11 → tablassert-7.4.12}/.github/workflows/pipy.yml +0 -0
  10. {tablassert-7.4.11 → tablassert-7.4.12}/.gitignore +0 -0
  11. {tablassert-7.4.11 → tablassert-7.4.12}/.pre-commit-config.yaml +0 -0
  12. {tablassert-7.4.11 → tablassert-7.4.12}/AGENTS.md +0 -0
  13. {tablassert-7.4.11 → tablassert-7.4.12}/CITATION.cff +0 -0
  14. {tablassert-7.4.11 → tablassert-7.4.12}/CONTRIBUTING.md +0 -0
  15. {tablassert-7.4.11 → tablassert-7.4.12}/Dockerfile +0 -0
  16. {tablassert-7.4.11 → tablassert-7.4.12}/LICENSE +0 -0
  17. {tablassert-7.4.11 → tablassert-7.4.12}/README.md +0 -0
  18. {tablassert-7.4.11 → tablassert-7.4.12}/docs/api/fullmap.md +0 -0
  19. {tablassert-7.4.11 → tablassert-7.4.12}/docs/api/lib.md +0 -0
  20. {tablassert-7.4.11 → tablassert-7.4.12}/docs/api/qc.md +0 -0
  21. {tablassert-7.4.11 → tablassert-7.4.12}/docs/api/utils.md +0 -0
  22. {tablassert-7.4.11 → tablassert-7.4.12}/docs/cli.md +0 -0
  23. {tablassert-7.4.11 → tablassert-7.4.12}/docs/configuration/advanced-example.md +0 -0
  24. {tablassert-7.4.11 → tablassert-7.4.12}/docs/configuration/graph.md +0 -0
  25. {tablassert-7.4.11 → tablassert-7.4.12}/docs/configuration/table.md +0 -0
  26. {tablassert-7.4.11 → tablassert-7.4.12}/docs/datassert.md +0 -0
  27. {tablassert-7.4.11 → tablassert-7.4.12}/docs/docker.md +0 -0
  28. {tablassert-7.4.11 → tablassert-7.4.12}/docs/examples/tutorial-data.csv +0 -0
  29. {tablassert-7.4.11 → tablassert-7.4.12}/docs/examples/tutorial-graph.yaml +0 -0
  30. {tablassert-7.4.11 → tablassert-7.4.12}/docs/examples/tutorial-table.yaml +0 -0
  31. {tablassert-7.4.11 → tablassert-7.4.12}/docs/examples.md +0 -0
  32. {tablassert-7.4.11 → tablassert-7.4.12}/docs/index.md +0 -0
  33. {tablassert-7.4.11 → tablassert-7.4.12}/docs/installation.md +0 -0
  34. {tablassert-7.4.11 → tablassert-7.4.12}/docs/tutorial.md +0 -0
  35. {tablassert-7.4.11 → tablassert-7.4.12}/llms.txt +0 -0
  36. {tablassert-7.4.11 → tablassert-7.4.12}/mkdocs.yml +0 -0
  37. {tablassert-7.4.11 → tablassert-7.4.12}/src/tablassert/__init__.py +0 -0
  38. {tablassert-7.4.11 → tablassert-7.4.12}/src/tablassert/cli.py +0 -0
  39. {tablassert-7.4.11 → tablassert-7.4.12}/src/tablassert/downloader.py +0 -0
  40. {tablassert-7.4.11 → tablassert-7.4.12}/src/tablassert/enums.py +0 -0
  41. {tablassert-7.4.11 → tablassert-7.4.12}/src/tablassert/fullmap.py +0 -0
  42. {tablassert-7.4.11 → tablassert-7.4.12}/src/tablassert/ingests.py +0 -0
  43. {tablassert-7.4.11 → tablassert-7.4.12}/src/tablassert/lib.py +0 -0
  44. {tablassert-7.4.11 → tablassert-7.4.12}/src/tablassert/log.py +0 -0
  45. {tablassert-7.4.11 → tablassert-7.4.12}/src/tablassert/models.py +0 -0
  46. {tablassert-7.4.11 → tablassert-7.4.12}/src/tablassert/nlp.py +0 -0
  47. {tablassert-7.4.11 → tablassert-7.4.12}/src/tablassert/progress.py +0 -0
  48. {tablassert-7.4.11 → tablassert-7.4.12}/src/tablassert/qc.py +0 -0
  49. {tablassert-7.4.11 → tablassert-7.4.12}/src/tablassert/utils.py +0 -0
  50. {tablassert-7.4.11 → tablassert-7.4.12}/tests/__init__.py +0 -0
  51. {tablassert-7.4.11 → tablassert-7.4.12}/tests/conftest.py +0 -0
  52. {tablassert-7.4.11 → tablassert-7.4.12}/tests/fixtures/invalid_section_missing_source.yaml +0 -0
  53. {tablassert-7.4.11 → tablassert-7.4.12}/tests/fixtures/minimal_section.yaml +0 -0
  54. {tablassert-7.4.11 → tablassert-7.4.12}/tests/fixtures/minimal_section_with_sections.yaml +0 -0
  55. {tablassert-7.4.11 → tablassert-7.4.12}/tests/test_downloader.py +0 -0
  56. {tablassert-7.4.11 → tablassert-7.4.12}/tests/test_enums.py +0 -0
  57. {tablassert-7.4.11 → tablassert-7.4.12}/tests/test_fullmap.py +0 -0
  58. {tablassert-7.4.11 → tablassert-7.4.12}/tests/test_ingests.py +0 -0
  59. {tablassert-7.4.11 → tablassert-7.4.12}/tests/test_lib.py +0 -0
  60. {tablassert-7.4.11 → tablassert-7.4.12}/tests/test_models.py +0 -0
  61. {tablassert-7.4.11 → tablassert-7.4.12}/tests/test_nlp.py +0 -0
  62. {tablassert-7.4.11 → tablassert-7.4.12}/tests/test_qc.py +0 -0
  63. {tablassert-7.4.11 → tablassert-7.4.12}/tests/test_utils.py +0 -0
  64. {tablassert-7.4.11 → tablassert-7.4.12}/uv.lock +0 -0
@@ -2,6 +2,11 @@
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  All notable changes to this project are documented in this file.
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+ ## 7.4.12 - 2026-06-29
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+
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+ ### Changes
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+ - Expanded the placeholder-term filter regex in `distinct()` (`fullmap.py`) to drop additional non-informative terms during entity resolution. The `bad` pattern now also excludes `not applicable`, `p value`, `variable`, `result`, `exposure`, `expression`, and `symbol` alongside the existing `none`, `nan`, `na`, `null`, and `unknown`, preventing these generic column-header-like values from being sent through resolution and producing spurious CURIE mappings.
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  ## 7.4.10 - 2026-05-29
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  ### Changes
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  Metadata-Version: 2.4
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  Name: tablassert
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- Version: 7.4.11
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+ Version: 7.4.12
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  Summary: Extract knowledge assertions from tabular data into NCATS Translator-compliant KGX NDJSON — declaratively, with entity resolution and quality control built in.
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  Project-URL: Homepage, https://github.com/SkyeAv/Tablassert
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  Project-URL: Source, https://github.com/SkyeAv/Tablassert
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+ # Changelog
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+ The canonical release history lives in the repository root at [`CHANGELOG.md`](https://github.com/SkyeAv/Tablassert/blob/main/CHANGELOG.md).
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+ ## Current Release Notes
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+ ## 7.4.12 - 2026-06-29
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+
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+ ### Changes
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+
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+ - Expanded the placeholder-term filter regex in `distinct()` (`fullmap.py`) to drop additional non-informative terms during entity resolution. The `bad` pattern now also excludes `not applicable`, `p value`, `variable`, `result`, `exposure`, `expression`, and `symbol` alongside the existing `none`, `nan`, `na`, `null`, and `unknown`, preventing these generic column-header-like values from being sent through resolution and producing spurious CURIE mappings.
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  [project]
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  name = "tablassert"
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- version = "7.4.11"
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+ version = "7.4.12"
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  description = "Extract knowledge assertions from tabular data into NCATS Translator-compliant KGX NDJSON — declaratively, with entity resolution and quality control built in."
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  authors = [
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  { name = "Skye Lane Goetz", email = "sgoetz@isbscience.org" }
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- # Changelog
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- The canonical release history lives in the repository root at [`CHANGELOG.md`](https://github.com/SkyeAv/Tablassert/blob/main/CHANGELOG.md).
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- ## Current Release Notes
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- ## 7.4.10 - 2026-05-29
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- ### Changes
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- - Enforced explicit `biolink:` namespace prefix on predicates and qualifiers emitted by `compile_subgraph()` in `lib.py`. Both `self.statement.predicate` and `x.qualifier` (in the qualifier loop) are now prefixed via `add("biolink:", ...)`, ensuring all output edges carry fully-qualified Biolink CURIEs rather than bare predicate/qualifier names.
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