sxs 2024.0.13__tar.gz → 2024.0.14__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (129) hide show
  1. {sxs-2024.0.13 → sxs-2024.0.14}/CITATION.cff +1 -1
  2. {sxs-2024.0.13 → sxs-2024.0.14}/PKG-INFO +1 -1
  3. sxs-2024.0.14/sxs/__version__.py +1 -0
  4. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/handlers.py +3 -0
  5. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/simulations/local.py +1 -0
  6. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/simulations/simulations.py +61 -2
  7. sxs-2024.0.13/sxs/__version__.py +0 -1
  8. {sxs-2024.0.13 → sxs-2024.0.14}/.codecov.yml +0 -0
  9. {sxs-2024.0.13 → sxs-2024.0.14}/.github/dependabot.yml +0 -0
  10. {sxs-2024.0.13 → sxs-2024.0.14}/.github/scripts/parse_bump_rule.py +0 -0
  11. {sxs-2024.0.13 → sxs-2024.0.14}/.github/workflows/build.yml +0 -0
  12. {sxs-2024.0.13 → sxs-2024.0.14}/.github/workflows/pr_rtd_link.yml +0 -0
  13. {sxs-2024.0.13 → sxs-2024.0.14}/.gitignore +0 -0
  14. {sxs-2024.0.13 → sxs-2024.0.14}/.readthedocs.yaml +0 -0
  15. {sxs-2024.0.13 → sxs-2024.0.14}/LICENSE +0 -0
  16. {sxs-2024.0.13 → sxs-2024.0.14}/README.md +0 -0
  17. {sxs-2024.0.13 → sxs-2024.0.14}/docs/api/catalog.md +0 -0
  18. {sxs-2024.0.13 → sxs-2024.0.14}/docs/api/horizons.md +0 -0
  19. {sxs-2024.0.13 → sxs-2024.0.14}/docs/api/load.md +0 -0
  20. {sxs-2024.0.13 → sxs-2024.0.14}/docs/api/metadata.md +0 -0
  21. {sxs-2024.0.13 → sxs-2024.0.14}/docs/api/simulation.md +0 -0
  22. {sxs-2024.0.13 → sxs-2024.0.14}/docs/api/simulations.md +0 -0
  23. {sxs-2024.0.13 → sxs-2024.0.14}/docs/api/time_series.md +0 -0
  24. {sxs-2024.0.13 → sxs-2024.0.14}/docs/api/waveforms.md +0 -0
  25. {sxs-2024.0.13 → sxs-2024.0.14}/docs/html/main.html +0 -0
  26. {sxs-2024.0.13 → sxs-2024.0.14}/docs/images/favicon.ico +0 -0
  27. {sxs-2024.0.13 → sxs-2024.0.14}/docs/index.md +0 -0
  28. {sxs-2024.0.13 → sxs-2024.0.14}/docs/javascript/mathjax.js +0 -0
  29. {sxs-2024.0.13 → sxs-2024.0.14}/docs/julia.md +0 -0
  30. {sxs-2024.0.13 → sxs-2024.0.14}/docs/mathematica.md +0 -0
  31. {sxs-2024.0.13 → sxs-2024.0.14}/docs/stylesheets/extra.css +0 -0
  32. {sxs-2024.0.13 → sxs-2024.0.14}/docs/tutorials/00-Introduction.ipynb +0 -0
  33. {sxs-2024.0.13 → sxs-2024.0.14}/docs/tutorials/01-Simulations_and_Metadata.ipynb +0 -0
  34. {sxs-2024.0.13 → sxs-2024.0.14}/docs/tutorials/02-Simulation.ipynb +0 -0
  35. {sxs-2024.0.13 → sxs-2024.0.14}/docs/tutorials/03-Horizons.ipynb +0 -0
  36. {sxs-2024.0.13 → sxs-2024.0.14}/docs/tutorials/04-Waveforms.ipynb +0 -0
  37. {sxs-2024.0.13 → sxs-2024.0.14}/docs/tutorials/05-PreprocessingForFFTs.ipynb +0 -0
  38. {sxs-2024.0.13 → sxs-2024.0.14}/mkdocs.yml +0 -0
  39. {sxs-2024.0.13 → sxs-2024.0.14}/pyproject.toml +0 -0
  40. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/__init__.py +0 -0
  41. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/caltechdata/__init__.py +0 -0
  42. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/caltechdata/catalog.py +0 -0
  43. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/caltechdata/login.py +0 -0
  44. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/catalog/__init__.py +0 -0
  45. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/catalog/catalog.py +0 -0
  46. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/catalog/create.py +0 -0
  47. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/catalog/description.py +0 -0
  48. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/horizons/__init__.py +0 -0
  49. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/horizons/spec_horizons_h5.py +0 -0
  50. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/horizons/xor_multishuffle_bzip2.py +0 -0
  51. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/julia/GWFrames.py +0 -0
  52. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/julia/__init__.py +0 -0
  53. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/juliapkg.json +0 -0
  54. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/metadata/__init__.py +0 -0
  55. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/metadata/metadata.py +0 -0
  56. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/simulations/__init__.py +0 -0
  57. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/simulations/simulation.py +0 -0
  58. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/time_series.py +0 -0
  59. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/__init__.py +0 -0
  60. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/bitwise.py +0 -0
  61. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/decimation/__init__.py +0 -0
  62. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/decimation/greedy_spline.py +0 -0
  63. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/decimation/linear_bisection.py +0 -0
  64. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/decimation/peak_greed.py +0 -0
  65. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/decimation/suppression.py +0 -0
  66. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/dicts.py +0 -0
  67. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/downloads.py +0 -0
  68. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/files.py +0 -0
  69. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/formats.py +0 -0
  70. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/inspire.py +0 -0
  71. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/lvcnr/__init__.py +0 -0
  72. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/lvcnr/comparisons.py +0 -0
  73. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/lvcnr/conversion.py +0 -0
  74. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/lvcnr/dataset.py +0 -0
  75. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/lvcnr/horizons.py +0 -0
  76. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/lvcnr/metadata.py +0 -0
  77. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/lvcnr/waveform_amp_phase.py +0 -0
  78. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/lvcnr/waveforms.py +0 -0
  79. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/monotonicity.py +0 -0
  80. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/pretty_print.py +0 -0
  81. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/references/__init__.py +0 -0
  82. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/references/ads.py +0 -0
  83. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/references/arxiv.py +0 -0
  84. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/references/fairchild_report.py +0 -0
  85. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/references/inspire.py +0 -0
  86. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/references/journal_abbreviations.py +0 -0
  87. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/references/references.py +0 -0
  88. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/select.py +0 -0
  89. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/smooth_functions.py +0 -0
  90. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/sxs_directories.py +0 -0
  91. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/sxs_identifiers.py +0 -0
  92. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/utilities/url.py +0 -0
  93. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/waveforms/__init__.py +0 -0
  94. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/waveforms/alignment.py +0 -0
  95. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/waveforms/format_handlers/__init__.py +0 -0
  96. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/waveforms/format_handlers/lvc.py +0 -0
  97. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/waveforms/format_handlers/nrar.py +0 -0
  98. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/waveforms/format_handlers/rotating_paired_diff_multishuffle_bzip2.py +0 -0
  99. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/waveforms/format_handlers/rotating_paired_xor_multishuffle_bzip2.py +0 -0
  100. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/waveforms/format_handlers/spectre_cce_v1.py +0 -0
  101. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/waveforms/memory.py +0 -0
  102. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/waveforms/mode_utilities.py +0 -0
  103. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/waveforms/transformations.py +0 -0
  104. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/waveforms/waveform_grid.py +0 -0
  105. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/waveforms/waveform_mixin.py +0 -0
  106. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/waveforms/waveform_modes.py +0 -0
  107. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/waveforms/waveform_signal.py +0 -0
  108. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/zenodo/__init__.py +0 -0
  109. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/zenodo/api/__init__.py +0 -0
  110. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/zenodo/api/deposit.py +0 -0
  111. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/zenodo/api/login.py +0 -0
  112. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/zenodo/api/records.py +0 -0
  113. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/zenodo/catalog.py +0 -0
  114. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/zenodo/creators.py +0 -0
  115. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/zenodo/simannex.py +0 -0
  116. {sxs-2024.0.13 → sxs-2024.0.14}/sxs/zenodo/surrogatemodeling.py +0 -0
  117. {sxs-2024.0.13 → sxs-2024.0.14}/tests/__init__.py +0 -0
  118. {sxs-2024.0.13 → sxs-2024.0.14}/tests/conftest.py +0 -0
  119. {sxs-2024.0.13 → sxs-2024.0.14}/tests/test_catalog.py +0 -0
  120. {sxs-2024.0.13 → sxs-2024.0.14}/tests/test_horizons.py +0 -0
  121. {sxs-2024.0.13 → sxs-2024.0.14}/tests/test_julia.py +0 -0
  122. {sxs-2024.0.13 → sxs-2024.0.14}/tests/test_loader.py +0 -0
  123. {sxs-2024.0.13 → sxs-2024.0.14}/tests/test_metadata.py +0 -0
  124. {sxs-2024.0.13 → sxs-2024.0.14}/tests/test_simulation.py +0 -0
  125. {sxs-2024.0.13 → sxs-2024.0.14}/tests/test_time_series.py +0 -0
  126. {sxs-2024.0.13 → sxs-2024.0.14}/tests/test_transformations.py +0 -0
  127. {sxs-2024.0.13 → sxs-2024.0.14}/tests/test_utilities.py +0 -0
  128. {sxs-2024.0.13 → sxs-2024.0.14}/tests/test_waveform_rotations.py +0 -0
  129. {sxs-2024.0.13 → sxs-2024.0.14}/tests/test_waveforms.py +0 -0
@@ -10,5 +10,5 @@ authors:
10
10
  title: "The sxs package"
11
11
  license: MIT
12
12
  doi: 10.5281/zenodo.4034006
13
- version: 2024.0.13
13
+ version: 2024.0.14
14
14
  date-released: 2024-10-09
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.3
2
2
  Name: sxs
3
- Version: 2024.0.13
3
+ Version: 2024.0.14
4
4
  Summary: Interface to data produced by the Simulating eXtreme Spacetimes collaboration
5
5
  Project-URL: Homepage, https://github.com/sxs-collaboration/sxs
6
6
  Project-URL: Documentation, https://sxs.readthedocs.io/
@@ -0,0 +1 @@
1
+ __version__ = "2024.0.14"
@@ -286,6 +286,9 @@ def load(location, download=None, cache=None, progress=None, truepath=None, **kw
286
286
  elif location == "local_simulations":
287
287
  return Simulations.local(download=download)
288
288
 
289
+ elif location == "dataframe":
290
+ return Simulations.load(download=download).dataframe
291
+
289
292
  elif sxs_id_version_lev_exact_re.match(location):
290
293
  return Simulation(location, download=download, cache=cache, progress=progress, **kwargs)
291
294
 
@@ -119,6 +119,7 @@ def local_simulations(annex_dir):
119
119
  [d for d in dirnames if d.startswith("Lev")]
120
120
  )[-1]
121
121
  metadata = Metadata.load(dirpath / highest_lev / "metadata")
122
+ metadata = metadata.add_standard_parameters()
122
123
 
123
124
  metadata["files"] = {
124
125
  p2i(file.relative_to(dirpath)): {"link": str(file)}
@@ -2,6 +2,58 @@
2
2
 
3
3
  import functools
4
4
  import collections
5
+ import pandas as pd
6
+
7
+ class SimulationsDataFrame(pd.DataFrame):
8
+ @property
9
+ def BHBH(self):
10
+ """Restrict dataframe to just binary black hole systems"""
11
+ return type(self)(self[self["object_types"] == "BHBH"])
12
+ BBH = BHBH
13
+
14
+ @property
15
+ def BHNS(self):
16
+ """Restrict dataframe to just black hole-neutron star systems"""
17
+ return type(self)(self[self["object_types"] == "BHNS"])
18
+ NSBH = BHNS
19
+
20
+ @property
21
+ def NSNS(self):
22
+ """Restrict dataframe to just binary neutron star systems"""
23
+ return type(self)(self[self["object_types"] == "NSNS"])
24
+ BNS = NSNS
25
+
26
+ @property
27
+ def noneccentric(self):
28
+ """Restrict dataframe to just non-eccentric systems (e<1e-3)"""
29
+ return type(self)(self[self["reference_eccentricity"] < 1e-3])
30
+
31
+ @property
32
+ def eccentric(self):
33
+ """Restrict dataframe to just eccentric systems (e>=1e-3)"""
34
+ return type(self)(self[self["reference_eccentricity"] >= 1e-3])
35
+
36
+ @property
37
+ def nonprecessing(self):
38
+ """Restrict dataframe to just nonprecessing systems
39
+
40
+ The criterion used here is that the sum of the x-y components
41
+ of the spins is less than 1e-3 at the reference time.
42
+ """
43
+ return type(self)(self[
44
+ (self["reference_chi1_perp"] + self["reference_chi2_perp"]) < 1e-3
45
+ ])
46
+
47
+ @property
48
+ def precessing(self):
49
+ """Restrict dataframe to just precessing systems
50
+
51
+ The criterion used here is that the sum of the x-y components
52
+ of the spins is at least 1e-3 at the reference time.
53
+ """
54
+ return type(self)(self[
55
+ (self["reference_chi1_perp"] + self["reference_chi2_perp"]) >= 1e-3
56
+ ])
5
57
 
6
58
 
7
59
  class Simulations(collections.OrderedDict):
@@ -110,7 +162,14 @@ class Simulations(collections.OrderedDict):
110
162
  with local_path.open("r") as f:
111
163
  local_simulations = json.load(f)
112
164
  simulations = cls.load(download)
165
+ doi_versions = {
166
+ k: v["DOI_versions"]
167
+ for k,v in simulations.items()
168
+ if "DOI_versions" in v
169
+ }
113
170
  simulations.update(local_simulations)
171
+ for k,v in doi_versions.items():
172
+ simulations[k]["DOI_versions"] = v
114
173
  simulations.__file__ = str(local_path)
115
174
  return simulations
116
175
 
@@ -315,7 +374,7 @@ class Simulations(collections.OrderedDict):
315
374
  dt = pd.to_datetime("1970-1-1").tz_localize("UTC")
316
375
  return dt
317
376
 
318
- sims_df = pd.concat((
377
+ sims_df = SimulationsDataFrame(pd.concat((
319
378
  simulations["reference_time"].map(floater),
320
379
  simulations["reference_mass_ratio"].map(floater),
321
380
  simulations["reference_dimensionless_spin1"].map(three_vec),
@@ -387,7 +446,7 @@ class Simulations(collections.OrderedDict):
387
446
  simulations["date_run_earliest"].map(datetime_from_string),
388
447
  simulations["date_run_latest"].map(datetime_from_string),
389
448
  simulations["date_postprocessing"].map(datetime_from_string),
390
- ), axis=1)
449
+ ), axis=1))
391
450
 
392
451
  sims_df.insert(0, "deprecated", (
393
452
  ~sims_df.superseded_by.isna()
@@ -1 +0,0 @@
1
- __version__ = "2024.0.13"
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