superlocalmemory 4.0.2__tar.gz → 4.0.4__tar.gz

{superlocalmemory-4.0.2/src/superlocalmemory.egg-info → superlocalmemory-4.0.4}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: superlocalmemory
-Version: 4.0.2
+Version: 4.0.4
 Summary: Local-first agent memory with auditable hybrid retrieval
 Author-email: Varun Pratap Bhardwaj <admin@superlocalmemory.com>
 License-Expression: AGPL-3.0-or-later
@@ -108,7 +108,7 @@ Dynamic: license-file
   </picture>
 </p>
 
-<h1 align="center">SuperLocalMemory V4.0.2</h1>
+<h1 align="center">SuperLocalMemory V4.0.4</h1>
 
 <h2 align="center">Rent the LLM. Own the memory.</h2>
 
@@ -130,12 +130,12 @@ guarantee here is stated as a falsifiable invariant, tested under an adversarial
 negative control, and shipped with the harness that regenerates the evidence:
 <code>python benchmark/run_all.py --trials 200 --output-dir results/</code>. What each experiment
 does <em>not</em> exercise is stated too.</p>
-<p align="center"><code>v4.0.2</code> — one control plane: <strong>SLM-Mesh</strong> peer coordination · multi-scope memory (personal / shared / global) · profiles · Cache · Compress · 7-layer retrieval · code graph · Entity Explorer · skill evolution · Modes A/B/C · GDPR retention &amp; audit chain · bounded loops — across CLI, MCP, dashboard, the <strong>Claude plugin</strong>, the <strong>Codex add-on</strong>, and documented IDE integrations.<br/>
+<p align="center"><code>v4.0.4</code> — one control plane: <strong>SLM-Mesh</strong> peer coordination · multi-scope memory (personal / shared / global) · profiles · Cache · Compress · 7-layer retrieval · code graph · Entity Explorer · skill evolution · Modes A/B/C · GDPR retention &amp; audit chain · bounded loops — across CLI, MCP, dashboard, the <strong>Claude plugin</strong>, the <strong>Codex add-on</strong>, and documented IDE integrations.<br/>
 Proxy: <code>slm wrap claude</code> &nbsp;·&nbsp; MCP: add <code>slm_compress</code> to your config &nbsp;·&nbsp; Skill: zero-config</p>
 <p align="center"><strong>Four public arXiv preprints</strong> · V4: <a href="https://arxiv.org/abs/2608.08253">arXiv:2608.08253</a> · companion archive: <a href="https://zenodo.org/records/21853302">Zenodo 21853302</a> (<a href="https://doi.org/10.5281/zenodo.21853302">DOI 10.5281/zenodo.21853302</a>) · prior preprints: <a href="https://arxiv.org/abs/2603.02240">2603.02240</a> · <a href="https://arxiv.org/abs/2603.14588">2603.14588</a> · <a href="https://arxiv.org/abs/2604.04514">2604.04514</a>.</p>
 
 <p align="center">
-  <a href="CHANGELOG.md"><img src="https://img.shields.io/badge/v4.0.2-Current_Release-2ea44f?style=for-the-badge&logo=checkmarx&logoColor=white" alt="v4.0.2 — Current Release"/></a>
+  <a href="CHANGELOG.md"><img src="https://img.shields.io/badge/v4.0.4-Current_Release-2ea44f?style=for-the-badge&logo=checkmarx&logoColor=white" alt="v4.0.4 — Current Release"/></a>
   <a href="https://arxiv.org/abs/2608.08253"><img src="https://img.shields.io/badge/arXiv-2608.08253-b31b1b?style=for-the-badge&logo=arxiv&logoColor=white" alt="SuperLocalMemory 4.0 paper on arXiv:2608.08253"/></a>
   <a href="https://zenodo.org/records/21853302"><img src="https://img.shields.io/badge/Zenodo-10.5281%2Fzenodo.21853302-1682D4?style=for-the-badge&logo=zenodo&logoColor=white" alt="V4 paper on Zenodo: 10.5281/zenodo.21853302"/></a>
   <a href="https://arxiv.org/abs/2603.14588"><img src="https://img.shields.io/badge/arXiv-2603.14588-b31b1b?style=for-the-badge&logo=arxiv&logoColor=white" alt="arXiv Paper"/></a>
@@ -165,7 +165,7 @@ SuperLocalMemory V4 combines conventional dense and lexical retrieval with graph
 
 **Memory with a sense of time.** SLM does not only store *what* an agent learned — it records *when*. Every fact carries ingestion timing and provenance; recall runs a dedicated temporal candidate channel alongside semantic, lexical, and associative retrieval; scenes and entity timelines reconstruct sequence; and the lifecycle lets neglected memory decay and self-archive instead of growing without bound. Time is a first-class ranking and lifecycle signal rather than a timestamp column an agent never reads — which is what lets a long-lived agent reason about how its context changed, not only what it currently holds.
 
-**What V4.0.2 ships.** V4 is a *governed* local-first control plane — every canonical write is admitted, policy-authorized, tracked as durable per-store obligations (lexical, temporal, vector), and sealed by a completion manifest, so it is either fully applied or explicitly marked degraded, never silently half-done. Flagship surfaces in this release:
+**What V4.0.4 ships.** Existing users can now preview and explicitly refresh SLM-owned host integrations with `slm upgrade-hosts`, while package installation and MCP startup no longer silently modify host hook configuration. V4.0.4 also adds an optional, capability-negotiated Bounded Loops observation bridge: compatible terminal graph receipts enter a separate, profile-scoped `learning.db` table and appear in Living Brain, without affecting recall, ranking, routing, or automatic learning. V4 remains a *governed* local-first control plane — every canonical write is admitted, policy-authorized, tracked as durable per-store obligations (lexical, temporal, vector), and sealed by a completion manifest, so it is either fully applied or explicitly marked degraded, never silently half-done. Flagship surfaces in this release:
 
 - **[SLM-Mesh](#slm-mesh-cross-session--cross-machine-coordination)** — authenticated cross-session and cross-machine peer coordination (messages, locks, shared state, inbox/outbox, optional discovery). Coordination only — not automatic replicated memory.
 - **Multi-scope memory & profiles** — workspaces (profiles) plus `personal` / `shared` / `global` scopes; cross-profile recall is default-deny.
@@ -174,7 +174,7 @@ SuperLocalMemory V4 combines conventional dense and lexical retrieval with graph
 - **Modes A / B / C** — local-only (A), on-device LLM enrichment (B), provider-assisted (C). An operating mode records technical locality facts; it does **not** determine EU AI Act legal compliance (that is deployment-context assessment — see [Privacy controls](#privacy-controls-and-operating-modes)).
 - **GDPR posture, retention & audit chain** — export, fail-closed cross-store erasure, retention policies, and a hash-chained audit trail. Engineering controls for compliance programs, not a legal certification.
 - **7-layer retrieval/recall stack & code graph** — multi-channel candidates (semantic, BM25, temporal, Hopfield, spreading activation) plus optional code-graph tools for blast radius and review context.
-- **MCP profiles** — `full` exposes **42** tools (default everyday surface); `power` **54**; `whole` **87** (all registered). Also `core` (14), `code` (24), and `mesh` (8).
+- **MCP profiles** — `code` exposes **29** tools for installed coding agents; `full` **47**; `power` **59**; `whole` **92** (all registered). Also `core` (14), `mesh` (8), and the unrestricted default surface (47 with mesh enabled).
 - **Governed write path & verifiable transactions** — admission + policy control, a per-owner obligation ledger, and a hash-sealed completion manifest with a reconciler that redrives unmet obligations.
 - **Self-healing lifecycle & admin remediation** — stale locks cleared on restart; list/resolve stuck operations from CLI, MCP, or the dashboard.
 
@@ -490,6 +490,22 @@ Full docs: [docs/multi-machine.md](docs/multi-machine.md) · [docs/distributed-d
 
 After any install path: `slm setup` → `slm doctor` → `slm warmup` (optional, pre-downloads ~500MB embedding model).
 
+### Upgrading an existing installation
+
+An npm, pip, or repository update upgrades the SLM runtime; it does not silently
+rewrite your IDE configuration, hooks, or plugin state. Review the existing
+integrations first:
+
+```bash
+slm upgrade-hosts
+```
+
+Then explicitly apply the hosts you approve, for example
+`slm upgrade-hosts --host codex --apply`, or use
+`slm upgrade-hosts --all-detected --apply` after reviewing the preview. See
+[Host Integration Upgrades](docs/host-upgrades.md) for the full safety contract
+and the Claude Code plugin update path.
+
 | Component | Size | When |
 |:----------|:-----|:-----|
 | Core libraries (numpy, scipy, networkx) | ~50MB | During install |
@@ -523,11 +539,11 @@ Control tool surface via `SLM_MCP_PROFILE`:
 | Profile | Tools | Use case |
 |:--------|:-----:|:---------|
 | `core` | 14 | Memory, session, and optimize core |
-| `code` | 24 | Core + code-graph tools + profile switching + bounded loops |
+| `code` | 29 | Core + portable Brain evidence + code-graph tools + profile switching + bounded loops |
 | `mesh` | 8 | SLM-Mesh only — multi-session / multi-machine coordination |
-| `full` | 42 | Memory + optimize + evolution + mesh + bounded loops |
-| `power` | 54 | Full + administration, lifecycle, and diagnostics |
-| `whole` | 87 | Every registered MCP tool |
+| `full` | 47 | Memory + portable Brain evidence + optimize + evolution + mesh + bounded loops |
+| `power` | 59 | Full + administration, lifecycle, and diagnostics |
+| `whole` | 92 | Every registered MCP tool |
 
 **Precedence:** `ALL` > `TOOLS` > `PROFILE` > `default`
 
@@ -538,7 +554,7 @@ slm mcp
 
 For a predictable small surface, set `core` explicitly. Leaving the variable
 unset retains the compatibility default, whose mesh tools follow the local
-mesh setting. Count-suffixed aliases remain for backward compatibility and emit a migration warning: `core14`, `code20`, `code21`, `code24`, `mesh8`, `full38`, `full39`, `full42`, `power50`, `power51`, `power54`, `whole81`, `whole84`. Unknown names stop startup instead of silently selecting another tool set.
+mesh setting. Count-suffixed aliases remain for backward compatibility and emit a migration warning: `core14`, `code20`, `code21`, `code24`, `code28`, `code29`, `mesh8`, `full38`, `full39`, `full42`, `full46`, `full47`, `power50`, `power51`, `power54`, `power58`, `power59`, `whole81`, `whole84`, `whole91`, `whole92`. Unknown names stop startup instead of silently selecting another tool set.
 
 Per-IDE configs available for Claude Code, Cursor, Windsurf, VS Code Copilot, Continue, Gemini CLI, JetBrains, Zed, and more (15 configs in `ide/configs/`). See [docs/ide-setup.md](docs/ide-setup.md).
 
@@ -750,25 +766,12 @@ Multi-Agent Memory workspace.
 
 ## Framework Adapters (V4)
 
-SLM ships nine framework adapters under `ide/integrations/`. Each adapter
-wires SLM as the memory and history provider for the respective framework
-without replacing the framework's own agent runtime.
-
-| Framework | Directory |
-|-----------|-----------|
-| LangGraph | `ide/integrations/langgraph/` |
-| Semantic Kernel | `ide/integrations/semantic-kernel/` |
-| Microsoft Agent Framework | `ide/integrations/agent-framework/` |
-| LangChain | `ide/integrations/langchain/` |
-| LlamaIndex | `ide/integrations/llamaindex/` |
-| CrewAI | `ide/integrations/crewai/` |
-| AutoGen | `ide/integrations/autogen/` |
-| Google ADK | `ide/integrations/google-adk/` |
-| OpenAI Agents | `ide/integrations/openai-agents/` |
-
-Pydantic AI is not included — it does not expose a formal memory interface for
-external providers. Each adapter's `README.md` covers installation and
-configuration for that framework.
+SLM ships nine adapters under `ide/integrations/`: LangGraph, Semantic Kernel,
+Microsoft Agent Framework, LangChain, LlamaIndex, CrewAI, AutoGen, Google ADK,
+and OpenAI Agents. Each wires SLM as memory and history without replacing the
+framework runtime; its directory contains installation/configuration guidance.
+Pydantic AI is not included because it does not expose a formal external-memory
+interface.
 
 ---
 
@@ -784,6 +787,7 @@ configuration for that framework.
 | Published benchmark evidence | [docs/benchmarks.md](docs/benchmarks.md) |
 | CLI reference | [docs/cli-reference.md](docs/cli-reference.md) |
 | MCP tools reference | [docs/mcp-tools.md](docs/mcp-tools.md) |
+| Optional Bounded Loops bridge | [docs/bounded-loops-bridge.md](docs/bounded-loops-bridge.md) |
 | Getting started | [docs/getting-started.md](docs/getting-started.md) |
 | IDE setup (15 configs) | [docs/ide-setup.md](docs/ide-setup.md) |
 | Teams, users, and RBAC | [docs/rbac-teams.md](docs/rbac-teams.md) |
@@ -800,21 +804,13 @@ runtime capability is enabled and healthy. See [CHANGELOG.md](CHANGELOG.md) for
 the complete release history.
 ## Research Papers
 
-SuperLocalMemory has a V4 arXiv preprint with a companion Zenodo archive, plus three earlier arXiv preprints (2026):
-
-- **SuperLocalMemory 4.0: The Governed Memory Operating System for AI Agents:** [arXiv:2608.08253](https://arxiv.org/abs/2608.08253) · [Zenodo 21853302](https://zenodo.org/records/21853302) · [DOI 10.5281/zenodo.21853302](https://doi.org/10.5281/zenodo.21853302).
-- **The Living Brain (V3.3):** [arXiv:2604.04514](https://arxiv.org/abs/2604.04514) · [Zenodo 19435120](https://zenodo.org/records/19435120)
-- **Information-Geometric Foundations (V3):** [arXiv:2603.14588](https://arxiv.org/abs/2603.14588) · [Zenodo 19038659](https://zenodo.org/records/19038659)
-- **Trust & Behavioral Foundations (V2):** [arXiv:2603.02240](https://arxiv.org/abs/2603.02240) · [Zenodo 18709670](https://zenodo.org/records/18709670)
+SuperLocalMemory has a V4 [arXiv preprint](https://arxiv.org/abs/2608.08253) with [Zenodo archive](https://zenodo.org/records/21853302) and [DOI](https://doi.org/10.5281/zenodo.21853302), plus [The Living Brain (V3.3)](https://arxiv.org/abs/2604.04514), [Information-Geometric Foundations (V3)](https://arxiv.org/abs/2603.14588), and [Trust & Behavioral Foundations (V2)](https://arxiv.org/abs/2603.02240).
 
 Use the citation metadata on the linked arXiv or Zenodo records.
 
 ## Support / License / Qualixar
-See [CONTRIBUTING.md](CONTRIBUTING.md) for guidelines, the [Wiki](https://github.com/qualixar/superlocalmemory/wiki) for detailed documentation, and [LICENSE](LICENSE) for the GNU Affero General Public License v3.0 (AGPL-3.0).
-For commercial licensing (closed-source, proprietary, or hosted use), see [COMMERCIAL-LICENSE.md](COMMERCIAL-LICENSE.md) or contact varun.pratap.bhardwaj@gmail.com.
-Copyright (c) 2026 Varun Pratap Bhardwaj / Qualixar · Part of [Qualixar](https://qualixar.com) · Author: [Varun Pratap Bhardwaj](https://varunpratap.com)
-Acknowledgments: [Everything Claude Code](https://github.com/affaan-m/everything-claude-code) informed skill observation; [HKUDS/OpenSpace](https://github.com/HKUDS/OpenSpace) informed skill-evolution verification.
-Qualixar builds open-source infrastructure for AI reliability engineering. Start at [qualixar.com](https://qualixar.com) or browse the [research archive](https://huggingface.co/Qualixar).
+See [CONTRIBUTING.md](CONTRIBUTING.md), the [Wiki](https://github.com/qualixar/superlocalmemory/wiki), and [LICENSE](LICENSE) (AGPL-3.0). For commercial licensing, see [COMMERCIAL-LICENSE.md](COMMERCIAL-LICENSE.md) or contact varun.pratap.bhardwaj@gmail.com.
+Copyright (c) 2026 Varun Pratap Bhardwaj / Qualixar · [Qualixar](https://qualixar.com) · [research archive](https://huggingface.co/Qualixar). Acknowledgments: [Everything Claude Code](https://github.com/affaan-m/everything-claude-code) informed skill observation; [HKUDS/OpenSpace](https://github.com/HKUDS/OpenSpace) informed skill-evolution verification.
 
 ## Star This Project
 

{superlocalmemory-4.0.2 → superlocalmemory-4.0.4}/README.md

@@ -5,7 +5,7 @@
   </picture>
 </p>
 
-<h1 align="center">SuperLocalMemory V4.0.2</h1>
+<h1 align="center">SuperLocalMemory V4.0.4</h1>
 
 <h2 align="center">Rent the LLM. Own the memory.</h2>
 
@@ -27,12 +27,12 @@ guarantee here is stated as a falsifiable invariant, tested under an adversarial
 negative control, and shipped with the harness that regenerates the evidence:
 <code>python benchmark/run_all.py --trials 200 --output-dir results/</code>. What each experiment
 does <em>not</em> exercise is stated too.</p>
-<p align="center"><code>v4.0.2</code> — one control plane: <strong>SLM-Mesh</strong> peer coordination · multi-scope memory (personal / shared / global) · profiles · Cache · Compress · 7-layer retrieval · code graph · Entity Explorer · skill evolution · Modes A/B/C · GDPR retention &amp; audit chain · bounded loops — across CLI, MCP, dashboard, the <strong>Claude plugin</strong>, the <strong>Codex add-on</strong>, and documented IDE integrations.<br/>
+<p align="center"><code>v4.0.4</code> — one control plane: <strong>SLM-Mesh</strong> peer coordination · multi-scope memory (personal / shared / global) · profiles · Cache · Compress · 7-layer retrieval · code graph · Entity Explorer · skill evolution · Modes A/B/C · GDPR retention &amp; audit chain · bounded loops — across CLI, MCP, dashboard, the <strong>Claude plugin</strong>, the <strong>Codex add-on</strong>, and documented IDE integrations.<br/>
 Proxy: <code>slm wrap claude</code> &nbsp;·&nbsp; MCP: add <code>slm_compress</code> to your config &nbsp;·&nbsp; Skill: zero-config</p>
 <p align="center"><strong>Four public arXiv preprints</strong> · V4: <a href="https://arxiv.org/abs/2608.08253">arXiv:2608.08253</a> · companion archive: <a href="https://zenodo.org/records/21853302">Zenodo 21853302</a> (<a href="https://doi.org/10.5281/zenodo.21853302">DOI 10.5281/zenodo.21853302</a>) · prior preprints: <a href="https://arxiv.org/abs/2603.02240">2603.02240</a> · <a href="https://arxiv.org/abs/2603.14588">2603.14588</a> · <a href="https://arxiv.org/abs/2604.04514">2604.04514</a>.</p>
 
 <p align="center">
-  <a href="CHANGELOG.md"><img src="https://img.shields.io/badge/v4.0.2-Current_Release-2ea44f?style=for-the-badge&logo=checkmarx&logoColor=white" alt="v4.0.2 — Current Release"/></a>
+  <a href="CHANGELOG.md"><img src="https://img.shields.io/badge/v4.0.4-Current_Release-2ea44f?style=for-the-badge&logo=checkmarx&logoColor=white" alt="v4.0.4 — Current Release"/></a>
   <a href="https://arxiv.org/abs/2608.08253"><img src="https://img.shields.io/badge/arXiv-2608.08253-b31b1b?style=for-the-badge&logo=arxiv&logoColor=white" alt="SuperLocalMemory 4.0 paper on arXiv:2608.08253"/></a>
   <a href="https://zenodo.org/records/21853302"><img src="https://img.shields.io/badge/Zenodo-10.5281%2Fzenodo.21853302-1682D4?style=for-the-badge&logo=zenodo&logoColor=white" alt="V4 paper on Zenodo: 10.5281/zenodo.21853302"/></a>
   <a href="https://arxiv.org/abs/2603.14588"><img src="https://img.shields.io/badge/arXiv-2603.14588-b31b1b?style=for-the-badge&logo=arxiv&logoColor=white" alt="arXiv Paper"/></a>
@@ -62,7 +62,7 @@ SuperLocalMemory V4 combines conventional dense and lexical retrieval with graph
 
 **Memory with a sense of time.** SLM does not only store *what* an agent learned — it records *when*. Every fact carries ingestion timing and provenance; recall runs a dedicated temporal candidate channel alongside semantic, lexical, and associative retrieval; scenes and entity timelines reconstruct sequence; and the lifecycle lets neglected memory decay and self-archive instead of growing without bound. Time is a first-class ranking and lifecycle signal rather than a timestamp column an agent never reads — which is what lets a long-lived agent reason about how its context changed, not only what it currently holds.
 
-**What V4.0.2 ships.** V4 is a *governed* local-first control plane — every canonical write is admitted, policy-authorized, tracked as durable per-store obligations (lexical, temporal, vector), and sealed by a completion manifest, so it is either fully applied or explicitly marked degraded, never silently half-done. Flagship surfaces in this release:
+**What V4.0.4 ships.** Existing users can now preview and explicitly refresh SLM-owned host integrations with `slm upgrade-hosts`, while package installation and MCP startup no longer silently modify host hook configuration. V4.0.4 also adds an optional, capability-negotiated Bounded Loops observation bridge: compatible terminal graph receipts enter a separate, profile-scoped `learning.db` table and appear in Living Brain, without affecting recall, ranking, routing, or automatic learning. V4 remains a *governed* local-first control plane — every canonical write is admitted, policy-authorized, tracked as durable per-store obligations (lexical, temporal, vector), and sealed by a completion manifest, so it is either fully applied or explicitly marked degraded, never silently half-done. Flagship surfaces in this release:
 
 - **[SLM-Mesh](#slm-mesh-cross-session--cross-machine-coordination)** — authenticated cross-session and cross-machine peer coordination (messages, locks, shared state, inbox/outbox, optional discovery). Coordination only — not automatic replicated memory.
 - **Multi-scope memory & profiles** — workspaces (profiles) plus `personal` / `shared` / `global` scopes; cross-profile recall is default-deny.
@@ -71,7 +71,7 @@ SuperLocalMemory V4 combines conventional dense and lexical retrieval with graph
 - **Modes A / B / C** — local-only (A), on-device LLM enrichment (B), provider-assisted (C). An operating mode records technical locality facts; it does **not** determine EU AI Act legal compliance (that is deployment-context assessment — see [Privacy controls](#privacy-controls-and-operating-modes)).
 - **GDPR posture, retention & audit chain** — export, fail-closed cross-store erasure, retention policies, and a hash-chained audit trail. Engineering controls for compliance programs, not a legal certification.
 - **7-layer retrieval/recall stack & code graph** — multi-channel candidates (semantic, BM25, temporal, Hopfield, spreading activation) plus optional code-graph tools for blast radius and review context.
-- **MCP profiles** — `full` exposes **42** tools (default everyday surface); `power` **54**; `whole` **87** (all registered). Also `core` (14), `code` (24), and `mesh` (8).
+- **MCP profiles** — `code` exposes **29** tools for installed coding agents; `full` **47**; `power` **59**; `whole` **92** (all registered). Also `core` (14), `mesh` (8), and the unrestricted default surface (47 with mesh enabled).
 - **Governed write path & verifiable transactions** — admission + policy control, a per-owner obligation ledger, and a hash-sealed completion manifest with a reconciler that redrives unmet obligations.
 - **Self-healing lifecycle & admin remediation** — stale locks cleared on restart; list/resolve stuck operations from CLI, MCP, or the dashboard.
 
@@ -387,6 +387,22 @@ Full docs: [docs/multi-machine.md](docs/multi-machine.md) · [docs/distributed-d
 
 After any install path: `slm setup` → `slm doctor` → `slm warmup` (optional, pre-downloads ~500MB embedding model).
 
+### Upgrading an existing installation
+
+An npm, pip, or repository update upgrades the SLM runtime; it does not silently
+rewrite your IDE configuration, hooks, or plugin state. Review the existing
+integrations first:
+
+```bash
+slm upgrade-hosts
+```
+
+Then explicitly apply the hosts you approve, for example
+`slm upgrade-hosts --host codex --apply`, or use
+`slm upgrade-hosts --all-detected --apply` after reviewing the preview. See
+[Host Integration Upgrades](docs/host-upgrades.md) for the full safety contract
+and the Claude Code plugin update path.
+
 | Component | Size | When |
 |:----------|:-----|:-----|
 | Core libraries (numpy, scipy, networkx) | ~50MB | During install |
@@ -420,11 +436,11 @@ Control tool surface via `SLM_MCP_PROFILE`:
 | Profile | Tools | Use case |
 |:--------|:-----:|:---------|
 | `core` | 14 | Memory, session, and optimize core |
-| `code` | 24 | Core + code-graph tools + profile switching + bounded loops |
+| `code` | 29 | Core + portable Brain evidence + code-graph tools + profile switching + bounded loops |
 | `mesh` | 8 | SLM-Mesh only — multi-session / multi-machine coordination |
-| `full` | 42 | Memory + optimize + evolution + mesh + bounded loops |
-| `power` | 54 | Full + administration, lifecycle, and diagnostics |
-| `whole` | 87 | Every registered MCP tool |
+| `full` | 47 | Memory + portable Brain evidence + optimize + evolution + mesh + bounded loops |
+| `power` | 59 | Full + administration, lifecycle, and diagnostics |
+| `whole` | 92 | Every registered MCP tool |
 
 **Precedence:** `ALL` > `TOOLS` > `PROFILE` > `default`
 
@@ -435,7 +451,7 @@ slm mcp
 
 For a predictable small surface, set `core` explicitly. Leaving the variable
 unset retains the compatibility default, whose mesh tools follow the local
-mesh setting. Count-suffixed aliases remain for backward compatibility and emit a migration warning: `core14`, `code20`, `code21`, `code24`, `mesh8`, `full38`, `full39`, `full42`, `power50`, `power51`, `power54`, `whole81`, `whole84`. Unknown names stop startup instead of silently selecting another tool set.
+mesh setting. Count-suffixed aliases remain for backward compatibility and emit a migration warning: `core14`, `code20`, `code21`, `code24`, `code28`, `code29`, `mesh8`, `full38`, `full39`, `full42`, `full46`, `full47`, `power50`, `power51`, `power54`, `power58`, `power59`, `whole81`, `whole84`, `whole91`, `whole92`. Unknown names stop startup instead of silently selecting another tool set.
 
 Per-IDE configs available for Claude Code, Cursor, Windsurf, VS Code Copilot, Continue, Gemini CLI, JetBrains, Zed, and more (15 configs in `ide/configs/`). See [docs/ide-setup.md](docs/ide-setup.md).
 
@@ -647,25 +663,12 @@ Multi-Agent Memory workspace.
 
 ## Framework Adapters (V4)
 
-SLM ships nine framework adapters under `ide/integrations/`. Each adapter
-wires SLM as the memory and history provider for the respective framework
-without replacing the framework's own agent runtime.
-
-| Framework | Directory |
-|-----------|-----------|
-| LangGraph | `ide/integrations/langgraph/` |
-| Semantic Kernel | `ide/integrations/semantic-kernel/` |
-| Microsoft Agent Framework | `ide/integrations/agent-framework/` |
-| LangChain | `ide/integrations/langchain/` |
-| LlamaIndex | `ide/integrations/llamaindex/` |
-| CrewAI | `ide/integrations/crewai/` |
-| AutoGen | `ide/integrations/autogen/` |
-| Google ADK | `ide/integrations/google-adk/` |
-| OpenAI Agents | `ide/integrations/openai-agents/` |
-
-Pydantic AI is not included — it does not expose a formal memory interface for
-external providers. Each adapter's `README.md` covers installation and
-configuration for that framework.
+SLM ships nine adapters under `ide/integrations/`: LangGraph, Semantic Kernel,
+Microsoft Agent Framework, LangChain, LlamaIndex, CrewAI, AutoGen, Google ADK,
+and OpenAI Agents. Each wires SLM as memory and history without replacing the
+framework runtime; its directory contains installation/configuration guidance.
+Pydantic AI is not included because it does not expose a formal external-memory
+interface.
 
 ---
 
@@ -681,6 +684,7 @@ configuration for that framework.
 | Published benchmark evidence | [docs/benchmarks.md](docs/benchmarks.md) |
 | CLI reference | [docs/cli-reference.md](docs/cli-reference.md) |
 | MCP tools reference | [docs/mcp-tools.md](docs/mcp-tools.md) |
+| Optional Bounded Loops bridge | [docs/bounded-loops-bridge.md](docs/bounded-loops-bridge.md) |
 | Getting started | [docs/getting-started.md](docs/getting-started.md) |
 | IDE setup (15 configs) | [docs/ide-setup.md](docs/ide-setup.md) |
 | Teams, users, and RBAC | [docs/rbac-teams.md](docs/rbac-teams.md) |
@@ -697,21 +701,13 @@ runtime capability is enabled and healthy. See [CHANGELOG.md](CHANGELOG.md) for
 the complete release history.
 ## Research Papers
 
-SuperLocalMemory has a V4 arXiv preprint with a companion Zenodo archive, plus three earlier arXiv preprints (2026):
-
-- **SuperLocalMemory 4.0: The Governed Memory Operating System for AI Agents:** [arXiv:2608.08253](https://arxiv.org/abs/2608.08253) · [Zenodo 21853302](https://zenodo.org/records/21853302) · [DOI 10.5281/zenodo.21853302](https://doi.org/10.5281/zenodo.21853302).
-- **The Living Brain (V3.3):** [arXiv:2604.04514](https://arxiv.org/abs/2604.04514) · [Zenodo 19435120](https://zenodo.org/records/19435120)
-- **Information-Geometric Foundations (V3):** [arXiv:2603.14588](https://arxiv.org/abs/2603.14588) · [Zenodo 19038659](https://zenodo.org/records/19038659)
-- **Trust & Behavioral Foundations (V2):** [arXiv:2603.02240](https://arxiv.org/abs/2603.02240) · [Zenodo 18709670](https://zenodo.org/records/18709670)
+SuperLocalMemory has a V4 [arXiv preprint](https://arxiv.org/abs/2608.08253) with [Zenodo archive](https://zenodo.org/records/21853302) and [DOI](https://doi.org/10.5281/zenodo.21853302), plus [The Living Brain (V3.3)](https://arxiv.org/abs/2604.04514), [Information-Geometric Foundations (V3)](https://arxiv.org/abs/2603.14588), and [Trust & Behavioral Foundations (V2)](https://arxiv.org/abs/2603.02240).
 
 Use the citation metadata on the linked arXiv or Zenodo records.
 
 ## Support / License / Qualixar
-See [CONTRIBUTING.md](CONTRIBUTING.md) for guidelines, the [Wiki](https://github.com/qualixar/superlocalmemory/wiki) for detailed documentation, and [LICENSE](LICENSE) for the GNU Affero General Public License v3.0 (AGPL-3.0).
-For commercial licensing (closed-source, proprietary, or hosted use), see [COMMERCIAL-LICENSE.md](COMMERCIAL-LICENSE.md) or contact varun.pratap.bhardwaj@gmail.com.
-Copyright (c) 2026 Varun Pratap Bhardwaj / Qualixar · Part of [Qualixar](https://qualixar.com) · Author: [Varun Pratap Bhardwaj](https://varunpratap.com)
-Acknowledgments: [Everything Claude Code](https://github.com/affaan-m/everything-claude-code) informed skill observation; [HKUDS/OpenSpace](https://github.com/HKUDS/OpenSpace) informed skill-evolution verification.
-Qualixar builds open-source infrastructure for AI reliability engineering. Start at [qualixar.com](https://qualixar.com) or browse the [research archive](https://huggingface.co/Qualixar).
+See [CONTRIBUTING.md](CONTRIBUTING.md), the [Wiki](https://github.com/qualixar/superlocalmemory/wiki), and [LICENSE](LICENSE) (AGPL-3.0). For commercial licensing, see [COMMERCIAL-LICENSE.md](COMMERCIAL-LICENSE.md) or contact varun.pratap.bhardwaj@gmail.com.
+Copyright (c) 2026 Varun Pratap Bhardwaj / Qualixar · [Qualixar](https://qualixar.com) · [research archive](https://huggingface.co/Qualixar). Acknowledgments: [Everything Claude Code](https://github.com/affaan-m/everything-claude-code) informed skill observation; [HKUDS/OpenSpace](https://github.com/HKUDS/OpenSpace) informed skill-evolution verification.
 
 ## Star This Project
 

{superlocalmemory-4.0.2 → superlocalmemory-4.0.4}/plugin-src/rules/AGENTS.md

@@ -82,10 +82,10 @@ When the SLM MCP server is unavailable, use these CLI equivalents:
 
 ## Tool reference (core profile — 14 tools)
 
-> The MCP config ships `SLM_MCP_PROFILE=code` (24 tools): the 14 core memory tools below
+> The MCP config ships `SLM_MCP_PROFILE=code` (29 tools): the 14 core memory tools below
 > **plus** 6 code-graph tools (`build_code_graph`, `get_blast_radius`, `query_graph`,
 > `semantic_search_code`, `get_review_context`, `detect_changes`) and `switch_profile`.
-> Use `full` (42 tools) to add mesh coordination. Use `power` (54 tools) for governance
+> Use `full` (47 tools) to add mesh coordination. Use `power` (59 tools) for governance
 > and audit tools. See slm-profile for profile switching.
 
 | Tool               | Signature (key params)                                                                       | Notes                                  |
@@ -128,4 +128,4 @@ When the SLM MCP server is unavailable, use these CLI equivalents:
 - **slm-optimize-advisor** — context compression and KV cache
 - **slm-governance-advisor** — scope/role compliance, retention policies, GDPR
 
-SuperLocalMemory v4.0.2 · Qualixar · AGPL-3.0-or-later
+SuperLocalMemory v4.0.4 · Qualixar · AGPL-3.0-or-later

{superlocalmemory-4.0.2 → superlocalmemory-4.0.4}/plugin-src/skills/slm-cache/SKILL.md

@@ -145,4 +145,4 @@ These subcommands control daemon-level cache settings. They do not read or write
 
 ---
 
-SuperLocalMemory v4.0.2 · Qualixar · AGPL-3.0-or-later
+SuperLocalMemory v4.0.4 · Qualixar · AGPL-3.0-or-later

{superlocalmemory-4.0.2 → superlocalmemory-4.0.4}/plugin-src/skills/slm-compress/SKILL.md

@@ -147,4 +147,4 @@ Content over 1 MB (1 000 000 bytes UTF-8) is processed but `reversible` is force
 
 ---
 
-SuperLocalMemory v4.0.2 · Qualixar · AGPL-3.0-or-later
+SuperLocalMemory v4.0.4 · Qualixar · AGPL-3.0-or-later

{superlocalmemory-4.0.2 → superlocalmemory-4.0.4}/plugin-src/skills/slm-governance/SKILL.md

@@ -245,4 +245,4 @@ Before running any destructive operation (`forget`, `compact_memories`):
 
 ---
 
-*SuperLocalMemory v4.0.2 · Qualixar · AGPL-3.0-or-later*
+*SuperLocalMemory v4.0.4 · Qualixar · AGPL-3.0-or-later*

{superlocalmemory-4.0.2 → superlocalmemory-4.0.4}/plugin-src/skills/slm-graph/SKILL.md

@@ -311,4 +311,4 @@ profile. See `slm-profile` for the full profile switching workflow.
 
 ---
 
-SuperLocalMemory v4.0.2 · Qualixar · AGPL-3.0-or-later
+SuperLocalMemory v4.0.4 · Qualixar · AGPL-3.0-or-later

{superlocalmemory-4.0.2 → superlocalmemory-4.0.4}/plugin-src/skills/slm-loop/SKILL.md

@@ -96,4 +96,4 @@ paused, name the approval needed; when errored, quote the short detail.
 
 ---
 
-SuperLocalMemory v4.0.2 · Qualixar · AGPL-3.0-or-later
+SuperLocalMemory v4.0.4 · Qualixar · AGPL-3.0-or-later

{superlocalmemory-4.0.2 → superlocalmemory-4.0.4}/plugin-src/skills/slm-mesh/SKILL.md

@@ -279,4 +279,4 @@ mesh availability.
 
 ---
 
-*SuperLocalMemory v4.0.2 · Qualixar · AGPL-3.0-or-later*
+*SuperLocalMemory v4.0.4 · Qualixar · AGPL-3.0-or-later*

{superlocalmemory-4.0.2 → superlocalmemory-4.0.4}/plugin-src/skills/slm-profile/SKILL.md

@@ -31,9 +31,9 @@ project, a client engagement, a production vs staging environment.
 | Profile | Tools | When to use |
 |---------|-------|-------------|
 | `core` | 14 tools — remember, recall, search, session, optimize | Minimal footprint, no code tools |
-| `code` | 24 tools — core + 6 code-graph tools + switch_profile + 3 bounded-loop tools | Default for IDE/coding agents |
-| `full` | 42 tools — code + all memory ops + mesh + bounded loops | Multi-session, team workflows |
-| `power` | 54 tools — full + governance + behavioral tools | Enterprise, admin, audit use cases |
+| `code` | 29 tools — core + portable Brain evidence + code graph + profile switching + bounded loops | Default for IDE/coding agents |
+| `full` | 47 tools — code + all memory ops + mesh + bounded loops | Multi-session, team workflows |
+| `power` | 59 tools — full + governance + behavioral tools | Enterprise, admin, audit use cases |
 | `mesh` | 8 tools — mesh coordination only | Lightweight cross-session signalling |
 
 The profile is set at MCP server startup via `SLM_MCP_PROFILE` in the MCP config.
@@ -145,4 +145,4 @@ Name them differently in your MCP config (e.g. `superlocalmemory-personal` and
 
 ---
 
-*SuperLocalMemory v4.0.2 · Qualixar · AGPL-3.0-or-later*
+*SuperLocalMemory v4.0.4 · Qualixar · AGPL-3.0-or-later*

{superlocalmemory-4.0.2 → superlocalmemory-4.0.4}/plugin-src/skills/slm-recall/SKILL.md

@@ -236,4 +236,4 @@ before recalling, then switch back. See `slm-profile` for workspace switching.
 
 ---
 
-*SuperLocalMemory v4.0.2 · Qualixar · AGPL-3.0-or-later*
+*SuperLocalMemory v4.0.4 · Qualixar · AGPL-3.0-or-later*

{superlocalmemory-4.0.2 → superlocalmemory-4.0.4}/plugin-src/skills/slm-remember/SKILL.md

@@ -238,4 +238,4 @@ different workspace, use `switch_profile` first. See `slm-profile`.
 
 ---
 
-*SuperLocalMemory v4.0.2 · Qualixar · AGPL-3.0-or-later*
+*SuperLocalMemory v4.0.4 · Qualixar · AGPL-3.0-or-later*

{superlocalmemory-4.0.2 → superlocalmemory-4.0.4}/plugin-src/skills/slm-scope/SKILL.md

@@ -173,4 +173,4 @@ to review the impact. See `slm-remember` for the full deletion discipline.
 
 ---
 
-*SuperLocalMemory v4.0.2 · Qualixar · AGPL-3.0-or-later*
+*SuperLocalMemory v4.0.4 · Qualixar · AGPL-3.0-or-later*

{superlocalmemory-4.0.2 → superlocalmemory-4.0.4}/plugin-src/skills/slm-session/SKILL.md

@@ -227,4 +227,4 @@ explicitly and call `recall` with `include_global`/`include_shared` after
 
 ---
 
-*SuperLocalMemory v4.0.2 · Qualixar · AGPL-3.0-or-later*
+*SuperLocalMemory v4.0.4 · Qualixar · AGPL-3.0-or-later*

{superlocalmemory-4.0.2 → superlocalmemory-4.0.4}/plugin-src/skills/slm-status/SKILL.md

@@ -163,4 +163,4 @@ multi-profile setup. To switch the active profile, see `slm-profile`.
 
 ---
 
-SuperLocalMemory v4.0.2 · Qualixar · AGPL-3.0-or-later
+SuperLocalMemory v4.0.4 · Qualixar · AGPL-3.0-or-later

{superlocalmemory-4.0.2 → superlocalmemory-4.0.4}/pyproject.toml

@@ -1,6 +1,6 @@
 [project]
 name = "superlocalmemory"
-version = "4.0.2"
+version = "4.0.4"
 description = "Local-first agent memory with auditable hybrid retrieval"
 readme = "README.md"
 license = "AGPL-3.0-or-later"

{superlocalmemory-4.0.2 → superlocalmemory-4.0.4}/src/superlocalmemory/__init__.py

@@ -32,7 +32,7 @@ if "OMP_NUM_THREADS" not in os.environ:
     os.environ["OMP_NUM_THREADS"] = "2"
 # ---------------------------------------------------------------------------
 
-__version__ = "4.0.2"
+__version__ = "4.0.4"
 
 _REQUIRED_VERSIONS = {
     "sentence_transformers": "5.3.0",

{superlocalmemory-4.0.2 → superlocalmemory-4.0.4}/src/superlocalmemory/cli/commands.py

@@ -321,25 +321,22 @@ def cmd_session(args: Namespace) -> None:
         print("Session close failed (daemon unreachable?)")
 
 
+def _cmd_upgrade_hosts(args: Namespace) -> None:
+    """Run the consented host-integration refresh command."""
+    from superlocalmemory.cli.host_upgrades import cmd_upgrade_hosts
+
+    cmd_upgrade_hosts(args)
+
+
 def dispatch(args: Namespace) -> None:
     """Route CLI command to the appropriate handler."""
-    # Auto-install/upgrade hooks on version change (single file read, ~0.1ms)
-    if (
-        args.command not in ("hooks", "codex", "init", "mcp")
-        and not getattr(args, "dry_run", False)
-    ):
-        try:
-            from superlocalmemory.hooks.claude_code_hooks import auto_install_if_needed
-            auto_install_if_needed()
-        except Exception:
-            pass
-
     handlers = {
         "init": cmd_init,
         "setup": cmd_setup,
         "mode": cmd_mode,
         "provider": cmd_provider,
         "connect": cmd_connect,
+        "upgrade-hosts": _cmd_upgrade_hosts,
         "migrate": cmd_migrate,
         "list": cmd_list,
         "remember": cmd_remember,
@@ -2151,6 +2148,7 @@ _COMMAND_GROUPS: list[tuple[str, list[tuple[str, str]]]] = [
         ("mode", "Switch memory mode: a (local) / b (Ollama) / c (cloud)"),
         ("provider", "Configure the cloud LLM provider + API key (Mode C)"),
         ("connect", "Auto-configure detected IDEs (Cursor, VS Code, …)"),
+        ("upgrade-hosts", "Preview or explicitly refresh existing SLM host integrations"),
         ("hooks", "Install/inspect Claude Code hooks"),
         ("codex", "Configure the Codex / OpenAI integration"),
     ]),
@@ -2206,6 +2204,7 @@ _COMMAND_GROUPS: list[tuple[str, list[tuple[str, str]]]] = [
     ("Learning & maintenance", [
         ("evolve", "Skill-evolution controls"),
         ("observe", "External observation / telemetry ingestion"),
+        ("brain", "Show profile-scoped Living Brain evidence"),
         ("decay", "Run a forgetting/decay pass"),
         ("consolidate", "Merge/consolidate related memories"),
         ("quantize", "Quantize embeddings to save space"),
@@ -2967,14 +2966,6 @@ def cmd_mcp(_args: Namespace) -> None:
     except Exception:
         pass  # A diagnostic must never prevent the server from starting.
 
-    # Auto-install hooks on MCP startup (fast path: ~0.1ms if already current)
-    # CRITICAL: No stdout — MCP uses stdio transport, any print corrupts protocol
-    try:
-        from superlocalmemory.hooks.claude_code_hooks import auto_install_if_needed
-        auto_install_if_needed()
-    except Exception:
-        pass
-
     from superlocalmemory.mcp.server import server
 
     server.run(transport="stdio")