subsurface-terra 2025.1.0rc12__tar.gz → 2025.1.0rc14__tar.gz

{subsurface_terra-2025.1.0rc12/subsurface_terra.egg-info → subsurface_terra-2025.1.0rc14}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: subsurface_terra
-Version: 2025.1.0rc12
+Version: 2025.1.0rc14
 Summary: Subsurface data types and utilities. This version is the one used by Terranigma Solutions. Please feel free to take anything in this repository for the original one.
 Home-page: https://softwareunderground.github.io/subsurface
 Author: Software Underground

{subsurface_terra-2025.1.0rc12 → subsurface_terra-2025.1.0rc14}/subsurface/_version.py

@@ -17,5 +17,5 @@ __version__: str
 __version_tuple__: VERSION_TUPLE
 version_tuple: VERSION_TUPLE
 
-__version__ = version = '2025.1.0rc12'
-__version_tuple__ = version_tuple = (2025, 1, 0, 'rc12')
+__version__ = version = '2025.1.0rc14'
+__version_tuple__ = version_tuple = (2025, 1, 0, 'rc14')

{subsurface_terra-2025.1.0rc12 → subsurface_terra-2025.1.0rc14}/subsurface/core/geological_formats/boreholes/boreholes.py

@@ -91,7 +91,10 @@ class BoreholeSet:
     def get_bottom_coords_for_each_lith(self) -> dict[Hashable, np.ndarray]:
         merged_df = self._merge_vertex_data_arrays_to_dataframe()
         component_lith_arrays = {}
-        for lith, group in merged_df.groupby('component lith'):
+        groupby = merged_df.groupby('lith_ids')
+        if groupby.ngroups == 0:
+            raise ValueError("No components found")
+        for lith, group in groupby:
             lith = int(lith)
             first_vertices = group.groupby('well_id').last().reset_index()
             array = first_vertices[['X', 'Y', 'Z']].values

{subsurface_terra-2025.1.0rc12 → subsurface_terra-2025.1.0rc14}/subsurface/core/structs/base_structures/structured_data.py

@@ -131,12 +131,29 @@ class StructuredData:
     def values(self) -> np.ndarray:
         return self.data[self.active_data_array_name].values
 
+    _bounds: Tuple[float, float, float, float, float, float] = None
+
     @property
     def bounds(self):
+        if self._bounds is not None:
+            return self._bounds
+
         array_: xr.DataArray = self.data[self.active_data_array_name]
-        bounds = self._get_bounds(array_)
+        bounds = self._get_bounds_from_coord(array_)
         return bounds
 
+    @bounds.setter
+    def bounds(self, bounds: Tuple[float, float, float, float, float, float]):
+        """
+        Set the bounds of the structured data. This is useful for defining the
+        spatial extent of the data in a structured grid.
+
+        Args:
+            bounds (Tuple[float, float, float, float, float, float]): A tuple containing
+                the minimum and maximum values for each dimension (xmin, xmax, ymin, ymax, zmin, zmax).
+        """
+        self._bounds = bounds
+
     @property
     def shape(self):
         return self.active_data_array.shape
@@ -146,7 +163,7 @@ class StructuredData:
         return self.data[self.active_data_array_name]
 
     @staticmethod
-    def _get_bounds(xr_obj: xr.DataArray):
+    def _get_bounds_from_coord(xr_obj: xr.DataArray):
         bounds = {}
         for coord in xr_obj.coords:
             bounds[coord] = (xr_obj[coord].min().item(), xr_obj[coord].max().item())

{subsurface_terra-2025.1.0rc12 → subsurface_terra-2025.1.0rc14}/subsurface/modules/reader/mesh/_trimesh_reader.py

@@ -47,7 +47,7 @@ def load_with_trimesh(path_to_file_or_buffer, file_type: Optional[str] = None,
         case TriMeshTransformations.RIGHT_HANDED_Z_UP_Y_REVERSED:
             # * Forward Z Up Y
             transform=np.array([
-                    [1, 0, 0, 0],
+                    [-1, 0, 0, 0],
                     [0, 0, 1, 0],
                     [0, 1, 0, 0],
                     [0, 0, 0, 1],
@@ -109,6 +109,10 @@ class LoadWithTrimesh:
             # If there's already an image reference in the material, let the user know
             if hasattr(material, 'image') and material.image is not None:
                 print("  -> Material already has an image:", material.image)
+            
+            if geometry.visual.uv is None:
+                raise ValueError("Geometry does not have UV coordinates for texture mapping, despite having a material."
+                                 "This can also happen if the geometry is given in quads instead of triangles.")
         else:
             print("No material found or no 'material' attribute on this geometry.")
 

{subsurface_terra-2025.1.0rc12 → subsurface_terra-2025.1.0rc14/subsurface_terra.egg-info}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: subsurface_terra
-Version: 2025.1.0rc12
+Version: 2025.1.0rc14
 Summary: Subsurface data types and utilities. This version is the one used by Terranigma Solutions. Please feel free to take anything in this repository for the original one.
 Home-page: https://softwareunderground.github.io/subsurface
 Author: Software Underground