subquadratic-ops-torch-cu13 0.2.0__tar.gz

subquadratic_ops_torch_cu13-0.2.0/PKG-INFO

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+Metadata-Version: 2.2
+Name: subquadratic-ops-torch-cu13
+Version: 0.2.0
+Summary: subquadratic-ops-torch-cu13 - GPU Accelerated Torch Extensions for Subquadratic Operations
+Author-Email: Alireza Moradzadeh <amoradzadeh@nvidia.com>
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+Project-URL: Homepage, https://github.com/nvidia-digital-bio/subquadraticOps-docs
+Project-URL: Documentation, https://nvidia-digital-bio.github.io/subquadraticOps-docs/index.html
+Project-URL: Repository, https://github.com/nvidia-digital-bio/subquadraticOps-docs
+Requires-Dist: scikit-build-core>=0.10
+Requires-Dist: nanobind>=1.5.0
+Requires-Dist: warp-lang>=1.8.0
+Requires-Dist: nvidia-ml-py
+Description-Content-Type: text/markdown
+
+# subquadratic_ops_torch
+
+## Introduction
+
+`subquadratic_ops_torch` provides CUDA kernels for subquadratic operations, e.g. long and short convolution.
+It contains PyTorch bindings to optimized kernels.
+
+## Installation
+
+Please install using `pip install subquadratic-ops-torch-cu[12,13]`
+
+## Documentation
+
+For detailed usage information of the kernels, please refer to the docstrings
+in their respective functions.
+
+## Usage
+
+You can import the library from python:
+
+```python
+import subquadratic_ops_torch as subq
+```
+
+Kernels are primarily exposed as function calls underlying `torch.ops`, which also provide a lower-level
+interface as `torch.library` operators.
+This allows you to export models using these operations via `torch.export`
+and run inference on them using TensorRT.
+
+
+## Support and Feedback
+
+Please contact the developers for any issues you might encounter.
+
+
+## Requirements
+
+- CUDA-compatible NVIDIA GPU (Ampere+)
+- CUDA Toolkit 12.0 or higher
+- Python 3.11-3.13
+
+## Modules
+
+### B2B CausalConv1d
+
+#### Operation
+
+Back-to-back causal conv1d for the Striped Hyena 2 architecture used in the Evo2 model.
+The operation is performed in a causal manner, meaning each position only attends to previous positions in the sequence.
+In code terms,
+```python
+in_dim = 8192
+
+width_proj = 8
+width_mixer = 128
+
+dtype = torch.float32
+
+class Conv1DModel(nn.Module):
+    def __init__(self, in_dim, width, dtype, skip_bias=False):
+        super(Conv1DModel, self).__init__()
+
+        self.conv = nn.Conv1d(
+            in_dim,
+            in_dim,
+            width,
+            padding=width - 1,
+            groups=in_dim,
+            bias=False,
+            dtype=dtype,
+            device="cuda:0",
+        )
+        self.width = width
+        self.weight = self.conv.weight.reshape(-1, width)
+        if skip_bias:
+            self.skip_bias = nn.Parameter(torch.zeros(in_dim, dtype=dtype, device="cuda:0").reshape(1, -1, 1))
+        else:
+            self.skip_bias = None
+
+    def forward(self, x):
+        seqlen = x.shape[-1]
+        out = self.conv(x)
+        return out[..., :seqlen]
+
+def model(x, conv1d_proj, conv1d_mixer):
+    xv = conv1d_proj(x)
+    z = xv[:,1::3, :] * xv[:, 2::3, :]
+    y = conv1d_mixer(z) + conv1d_mixer.skip_bias * z
+    return y * xv[:, ::3, :]
+x = torch.randn(batch_size, 3*in_dim, seq_dim)
+conv1d_proj = Conv1DModel(3*in_dim, width_proj)
+conv1d_mixer = Conv1DModel(in_dim, width_mixer, True)
+
+y = model(x, conv1d_proj, conv1d_mixer)
+```
+is equivalent to,
+```python
+weight_proj = torch.randn(3*in_dim, width_proj).to(dtype)
+weight_mixer = torch.randn(in_dim, width_mixer).to(dtype)
+skip_bias = torch.randn(in_dim).to(dtype)
+
+b2b_causal_conv1d(x, weight_proj, weight_mixer, skip_bias)
+
+```
+
+#### Supported Kernel Sizes for B2B Causal Conv1d
+
+| Kernel Type | Supported Sizes |
+|------------|-----------------|
+| Projection | 2, 3, 4, 8, 16, 32 |
+| Mixer | 2, 3, 4, 5, 6, 7, 8, 16, 32, 64, 128, 256 |
+
+#### CausalConv1d
+
+Causal conv1d: the convolution operation is performed in a causal manner, meaning each position only attends to previous positions in the sequence.
+In code terms,
+```python
+in_dim = 8192
+width = 8
+dtype = torch.float32
+model = nn.Conv1d(
+            in_dim,
+            in_dim,
+            width,
+            padding=width - 1,
+            groups=in_dim,
+            bias=False,
+            dtype=dtype,
+            device="cuda:0",
+        )
+y = model(x)
+```
+is equivalent to,
+```python
+weight = torch.randn((in_dim, width))
+causal_conv1d(x, weight)
+```
+
+#### Supported Kernel Sizes for Causal Conv1d
+
+| Kernel Type | Supported Sizes | Channel Last |
+|------------|-----------------|-----------|
+| CausalConv1d | <= 256        |    False  |
+| CausalConv1d | <= 128 (64 fp64) |  True   |
+
+
+
+### FFT Conv1d
+
+Non-causal 1D convolution using real FFT. Supports sequences up to FFT size 8192.
+
+```python
+from subquadratic_ops_torch.fft_conv1d import fft_conv1d
+
+batch_size, dim, seq_len, filter_dim = 64, 128, 512, 1024
+x = torch.randn(batch_size, dim, seq_len, device="cuda")
+weight = torch.randn(dim, filter_dim, device="cuda")
+y = fft_conv1d(x, weight)  # shape: (64, 128, 512)
+```
+
+### FFT CausalConv1d
+
+
+FFT Causal Conv1d: the convolution operation is performed in a causal manner, meaning each position only attends to previous positions in the sequence. It uses real FFT and IFFT instead of direct summation for convolution.
+In code terms,
+```python
+in_dim = 8192
+width = 1024
+dtype = torch.float32
+weight = torch.randn(1, in_dim, width)
+def model(x, w):
+    fft_size = x.shape[-1] * 2
+    xf = torch.fft.rfft(x, n=fft_size, dim=-1)
+    wf = torch.fft.rfft(w, n=fft_size, dim=-1)
+    return torch.fft.irfft(xf*wf, n=fft_size, dim=-1)[..., :x.shape[-1]]
+
+y = model(x, weight)
+
+```
+is equivalent to,
+```python
+weight = torch.randn((in_dim, width))
+y = fft_causal_conv1d(x, weight)
+
+```

subquadratic_ops_torch_cu13-0.2.0/pyproject.toml

@@ -0,0 +1,10 @@
+# SPDX-FileCopyrightText: Copyright (c) 2025 NVIDIA CORPORATION & AFFILIATES. All rights reserved.
+# SPDX-License-Identifier: Apache-2
+
+[build-system]
+requires = ["wheel-stub"]
+build-backend = "wheel_stub.buildapi"
+
+[tool.wheel_stub]
+index_url = "https://pypi.nvidia.com/"
+include_cuda_debuginfo = true