struphy 2.4.2__tar.gz → 2.4.3__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {struphy-2.4.2/src/struphy.egg-info → struphy-2.4.3}/PKG-INFO +18 -10
- {struphy-2.4.2 → struphy-2.4.3}/README.md +3 -3
- {struphy-2.4.2 → struphy-2.4.3}/pyproject.toml +17 -8
- struphy-2.4.3/src/struphy/bsplines/tests/test_eval_spline_mpi.py +784 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/console/compile.py +14 -9
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/console/format.py +0 -1
- struphy-2.4.3/src/struphy/console/likwid.py +31 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/console/main.py +175 -45
- struphy-2.4.3/src/struphy/console/parsers.py +51 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/console/pproc.py +4 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/console/run.py +37 -46
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/console/tests/test_console.py +2 -2
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/diagnostics/paraview/mesh_creator.py +82 -78
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/kernels_2d.py +12 -12
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/kernels_3d.py +12 -12
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/kernels_projectors_global_mhd.py +24 -24
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/control_variates/kernels_control_variate.py +113 -78
- struphy-2.4.3/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/fB_massless_kernels_control_variate.py +828 -0
- struphy-2.4.3/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/fnB_massless_cv_kernel_2.py +91 -0
- struphy-2.4.3/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/fnB_massless_kernels_control_variate.py +864 -0
- struphy-2.4.3/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/massless_cvker.py +341 -0
- struphy-2.4.3/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/massless_kernels_control_variate.py +1279 -0
- struphy-2.4.3/src/struphy/eigenvalue_solvers/legacy/massless_operators/fB_bb_kernel.py +595 -0
- struphy-2.4.3/src/struphy/eigenvalue_solvers/legacy/massless_operators/fB_bv_kernel.py +1019 -0
- struphy-2.4.3/src/struphy/eigenvalue_solvers/legacy/massless_operators/fB_vv_kernel.py +1009 -0
- struphy-2.4.3/src/struphy/eigenvalue_solvers/legacy/projectors_local/pro_local/kernels_projectors_local_mhd.py +820 -0
- struphy-2.4.3/src/struphy/eigenvalue_solvers/legacy/projectors_local/shape_pro_local/shape_L2_projector_kernel.py +2572 -0
- struphy-2.4.3/src/struphy/eigenvalue_solvers/legacy/projectors_local/shape_pro_local/shape_local_projector_kernel.py +3596 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/feec/basis_projection_kernels.py +37 -67
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/feec/basis_projection_ops.py +128 -89
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/feec/mass.py +120 -62
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/feec/preconditioner.py +2 -169
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/feec/projectors.py +172 -4
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/feec/psydac_derham.py +953 -903
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/feec/tests/test_eval_field.py +5 -5
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/feec/tests/test_field_init.py +11 -11
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/feec/tests/test_l2_projectors.py +2 -2
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/feec/tests/test_local_projectors.py +8 -8
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/feec/tests/test_lowdim_nel_is_1.py +7 -7
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/feec/tests/test_mass_matrices.py +18 -1
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/feec/utilities_kernels.py +82 -70
- struphy-2.4.3/src/struphy/feec/variational_utilities.py +1556 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/fields_background/equils.py +149 -1
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/fields_background/tests/test_desc_equil.py +7 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/fields_background/tests/test_gvec_equil.py +9 -5
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/initial/tests/test_init_perturbations.py +3 -3
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/io/inp/parameters.yml +1 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/io/inp/tutorials/params_02.yml +1 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/io/inp/verification/LinearVlasovAmpereOneSpecies_weakLandau.yml +1 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/io/inp/verification/VlasovAmpereOneSpecies_weakLandau.yml +1 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/io/setup.py +39 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/main.py +37 -14
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/models/base.py +28 -28
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/models/fluid.py +719 -416
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/models/hybrid.py +16 -45
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/models/kinetic.py +7 -25
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/models/tests/util.py +2 -2
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/models/toy.py +43 -64
- struphy-2.4.3/src/struphy/ode/solvers.py +124 -0
- struphy-2.4.3/src/struphy/ode/tests/test_ode_feec.py +183 -0
- struphy-2.4.3/src/struphy/ode/utils.py +106 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/pic/accumulation/accum_kernels.py +24 -24
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/pic/accumulation/accum_kernels_gc.py +15 -15
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/pic/accumulation/particles_to_grid.py +4 -4
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/pic/base.py +85 -66
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/pic/pushing/pusher.py +1 -90
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/pic/pushing/pusher_kernels.py +45 -45
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/pic/pushing/pusher_kernels_gc.py +6 -6
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/pic/tests/test_pic_legacy_files/accumulation_kernels_3d.py +631 -482
- struphy-2.4.3/src/struphy/pic/tests/test_pic_legacy_files/pusher_pos.py +2411 -0
- struphy-2.4.3/src/struphy/pic/tests/test_pic_legacy_files/pusher_vel_2d.py +696 -0
- struphy-2.4.3/src/struphy/pic/tests/test_pic_legacy_files/pusher_vel_3d.py +1521 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/pic/tests/test_pushers.py +4 -1
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/pic/utilities_kernels.py +10 -10
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/polar/basic.py +107 -158
- struphy-2.4.3/src/struphy/post_processing/likwid/hardware_dicts.py +61 -0
- struphy-2.4.3/src/struphy/post_processing/likwid/likwid_parser.py +579 -0
- struphy-2.4.3/src/struphy/post_processing/likwid/maxplotlylib.py +110 -0
- struphy-2.4.3/src/struphy/post_processing/likwid/plot_likwidproject.py +910 -0
- struphy-2.4.3/src/struphy/post_processing/likwid/plot_time_traces.py +189 -0
- struphy-2.4.3/src/struphy/post_processing/likwid/roofline_plotter.py +276 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/post_processing/post_processing_tools.py +3 -3
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/post_processing/pproc_struphy.py +15 -0
- struphy-2.4.3/src/struphy/post_processing/profile_struphy.py +170 -0
- struphy-2.4.3/src/struphy/profiling/profiling.py +338 -0
- struphy-2.4.3/src/struphy/propagators/__init__.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/propagators/base.py +10 -1
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/propagators/propagators_coupling.py +4 -1
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/propagators/propagators_fields.py +1657 -2471
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/propagators/propagators_markers.py +33 -6
- struphy-2.4.3/src/struphy/propagators/tests/__init__.py +0 -0
- struphy-2.4.3/src/struphy/propagators/tests/test_gyrokinetic_poisson.py +577 -0
- struphy-2.4.3/src/struphy/propagators/tests/test_poisson.py +429 -0
- struphy-2.4.2/src/struphy/psydac-2.4.2.dev0-py3-none-any.whl → struphy-2.4.3/src/struphy/psydac-2.4.3.dev0-py3-none-any.whl +0 -0
- struphy-2.4.3/src/struphy/utils/__init__.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/utils/clone_config.py +1 -1
- {struphy-2.4.2 → struphy-2.4.3/src/struphy.egg-info}/PKG-INFO +18 -10
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy.egg-info/SOURCES.txt +15 -1
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy.egg-info/requires.txt +15 -6
- struphy-2.4.2/src/struphy/bsplines/tests/test_eval_spline_mpi.py +0 -555
- struphy-2.4.2/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/fB_massless_kernels_control_variate.py +0 -427
- struphy-2.4.2/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/fnB_massless_cv_kernel_2.py +0 -30
- struphy-2.4.2/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/fnB_massless_kernels_control_variate.py +0 -459
- struphy-2.4.2/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/massless_cvker.py +0 -159
- struphy-2.4.2/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/massless_kernels_control_variate.py +0 -651
- struphy-2.4.2/src/struphy/eigenvalue_solvers/legacy/massless_operators/fB_bb_kernel.py +0 -298
- struphy-2.4.2/src/struphy/eigenvalue_solvers/legacy/massless_operators/fB_bv_kernel.py +0 -485
- struphy-2.4.2/src/struphy/eigenvalue_solvers/legacy/massless_operators/fB_vv_kernel.py +0 -569
- struphy-2.4.2/src/struphy/eigenvalue_solvers/legacy/projectors_local/pro_local/kernels_projectors_local_mhd.py +0 -372
- struphy-2.4.2/src/struphy/eigenvalue_solvers/legacy/projectors_local/shape_pro_local/shape_L2_projector_kernel.py +0 -1474
- struphy-2.4.2/src/struphy/eigenvalue_solvers/legacy/projectors_local/shape_pro_local/shape_local_projector_kernel.py +0 -1990
- struphy-2.4.2/src/struphy/feec/variational_utilities.py +0 -284
- struphy-2.4.2/src/struphy/pic/tests/test_pic_legacy_files/pusher_pos.py +0 -1542
- struphy-2.4.2/src/struphy/pic/tests/test_pic_legacy_files/pusher_vel_2d.py +0 -443
- struphy-2.4.2/src/struphy/pic/tests/test_pic_legacy_files/pusher_vel_3d.py +0 -970
- struphy-2.4.2/src/struphy/post_processing/profile_struphy.py +0 -165
- struphy-2.4.2/src/struphy/profiling/profiling.py +0 -176
- struphy-2.4.2/src/struphy/propagators/tests/test_gyrokinetic_poisson.py +0 -590
- struphy-2.4.2/src/struphy/propagators/tests/test_poisson.py +0 -431
- {struphy-2.4.2 → struphy-2.4.3}/LICENSE +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/setup.cfg +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/__init__.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/bsplines/__init__.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/bsplines/bsplines.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/bsplines/bsplines_kernels.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/bsplines/evaluation_kernels_1d.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/bsplines/evaluation_kernels_2d.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/bsplines/evaluation_kernels_3d.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/bsplines/shapefunc_kernels.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/bsplines/tests/__init__.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/bsplines/tests/test_bsplines_kernels.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/compile_struphy.mk +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/conftest.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/console/__init__.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/console/params.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/console/profile.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/console/test.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/console/units.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/dependencies.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/diagnostics/__init__.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/diagnostics/console_diagn.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/diagnostics/continuous_spectra.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/diagnostics/diagn_tools.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/diagnostics/paraview/__init__.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/diagnostics/paraview/vtk_writer.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/dispersion_relations/__init__.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/dispersion_relations/analytic.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/dispersion_relations/base.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/dispersion_relations/utilities.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/__init__.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/derivatives.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/kernels_projectors_global.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/MHD_eigenvalues_cylinder_1D.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/__init__.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/control_variates/__init__.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/control_variates/control_variate.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/__init__.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/fB_massless_control_variate.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/fnB_massless_control_variate.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/massless_control_variate.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/emw_operators.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/inner_products_1d.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/inner_products_2d.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/inner_products_3d.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/l2_error_1d.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/l2_error_2d.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/l2_error_3d.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/mass_matrices_3d_pre.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/massless_operators/__init__.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/massless_operators/fB_arrays.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/massless_operators/fB_massless_linear_operators.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/mhd_operators_MF.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/projectors_local/__init__.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/projectors_local/pro_local/__init__.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/projectors_local/pro_local/kernels_projectors_local.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/projectors_local/pro_local/mhd_operators_3d_local.py +0 -0
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- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/post_processing/orbits/orbits_kernels.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/post_processing/orbits/orbits_tools.py +0 -0
- {struphy-2.4.2/src/struphy/propagators → struphy-2.4.3/src/struphy/post_processing}/tests/__init__.py +0 -0
- {struphy-2.4.2/src/struphy/utils → struphy-2.4.3/src/struphy/profiling}/__init__.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/tutorials/tests/test_tutorials.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/utils/test_clone_config.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy/utils/utils.py +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy.egg-info/dependency_links.txt +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy.egg-info/entry_points.txt +0 -0
- {struphy-2.4.2 → struphy-2.4.3}/src/struphy.egg-info/top_level.txt +0 -0
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Metadata-Version: 2.4
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Name: struphy
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Version: 2.4.
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Version: 2.4.3
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Summary: Multi-model plasma physics package
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Author: Max Planck Institute for Plasma Physics
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Author-email: stefan.possanner@ipp.mpg.de, eric.sonnendruecker@ipp.mpg.de
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Provides-Extra: phys
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Requires-Dist: add-trailing-comma; extra == "dev"
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Requires-Dist: ruff>=0.9.1; extra == "dev"
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# Struphy - Structure-preserving hybrid codes
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Use a virtual environment:
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[project]
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name = "struphy"
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version = "2.4.
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version = "2.4.3"
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[project.optional-dependencies]
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phys = [
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'desc-opt',
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dev = [
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'tabulate',
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doc = [
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'struphy[phys]',
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likwid = [
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'struphy[dev]',
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[project.urls]
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struphy = ['compile_struphy.mk',
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[tool.autopep8]
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# Add specific settings for autopep8
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