struphy 2.4.2__tar.gz → 2.4.3__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (354) hide show
  1. {struphy-2.4.2/src/struphy.egg-info → struphy-2.4.3}/PKG-INFO +18 -10
  2. {struphy-2.4.2 → struphy-2.4.3}/README.md +3 -3
  3. {struphy-2.4.2 → struphy-2.4.3}/pyproject.toml +17 -8
  4. struphy-2.4.3/src/struphy/bsplines/tests/test_eval_spline_mpi.py +784 -0
  5. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/console/compile.py +14 -9
  6. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/console/format.py +0 -1
  7. struphy-2.4.3/src/struphy/console/likwid.py +31 -0
  8. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/console/main.py +175 -45
  9. struphy-2.4.3/src/struphy/console/parsers.py +51 -0
  10. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/console/pproc.py +4 -0
  11. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/console/run.py +37 -46
  12. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/console/tests/test_console.py +2 -2
  13. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/diagnostics/paraview/mesh_creator.py +82 -78
  14. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/kernels_2d.py +12 -12
  15. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/kernels_3d.py +12 -12
  16. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/kernels_projectors_global_mhd.py +24 -24
  17. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/control_variates/kernels_control_variate.py +113 -78
  18. struphy-2.4.3/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/fB_massless_kernels_control_variate.py +828 -0
  19. struphy-2.4.3/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/fnB_massless_cv_kernel_2.py +91 -0
  20. struphy-2.4.3/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/fnB_massless_kernels_control_variate.py +864 -0
  21. struphy-2.4.3/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/massless_cvker.py +341 -0
  22. struphy-2.4.3/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/massless_kernels_control_variate.py +1279 -0
  23. struphy-2.4.3/src/struphy/eigenvalue_solvers/legacy/massless_operators/fB_bb_kernel.py +595 -0
  24. struphy-2.4.3/src/struphy/eigenvalue_solvers/legacy/massless_operators/fB_bv_kernel.py +1019 -0
  25. struphy-2.4.3/src/struphy/eigenvalue_solvers/legacy/massless_operators/fB_vv_kernel.py +1009 -0
  26. struphy-2.4.3/src/struphy/eigenvalue_solvers/legacy/projectors_local/pro_local/kernels_projectors_local_mhd.py +820 -0
  27. struphy-2.4.3/src/struphy/eigenvalue_solvers/legacy/projectors_local/shape_pro_local/shape_L2_projector_kernel.py +2572 -0
  28. struphy-2.4.3/src/struphy/eigenvalue_solvers/legacy/projectors_local/shape_pro_local/shape_local_projector_kernel.py +3596 -0
  29. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/feec/basis_projection_kernels.py +37 -67
  30. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/feec/basis_projection_ops.py +128 -89
  31. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/feec/mass.py +120 -62
  32. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/feec/preconditioner.py +2 -169
  33. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/feec/projectors.py +172 -4
  34. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/feec/psydac_derham.py +953 -903
  35. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/feec/tests/test_eval_field.py +5 -5
  36. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/feec/tests/test_field_init.py +11 -11
  37. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/feec/tests/test_l2_projectors.py +2 -2
  38. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/feec/tests/test_local_projectors.py +8 -8
  39. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/feec/tests/test_lowdim_nel_is_1.py +7 -7
  40. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/feec/tests/test_mass_matrices.py +18 -1
  41. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/feec/utilities_kernels.py +82 -70
  42. struphy-2.4.3/src/struphy/feec/variational_utilities.py +1556 -0
  43. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/fields_background/equils.py +149 -1
  44. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/fields_background/tests/test_desc_equil.py +7 -0
  45. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/fields_background/tests/test_gvec_equil.py +9 -5
  46. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/initial/tests/test_init_perturbations.py +3 -3
  47. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/io/inp/parameters.yml +1 -0
  48. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/io/inp/tutorials/params_02.yml +1 -0
  49. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/io/inp/verification/LinearVlasovAmpereOneSpecies_weakLandau.yml +1 -0
  50. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/io/inp/verification/VlasovAmpereOneSpecies_weakLandau.yml +1 -0
  51. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/io/setup.py +39 -0
  52. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/main.py +37 -14
  53. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/models/base.py +28 -28
  54. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/models/fluid.py +719 -416
  55. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/models/hybrid.py +16 -45
  56. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/models/kinetic.py +7 -25
  57. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/models/tests/util.py +2 -2
  58. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/models/toy.py +43 -64
  59. struphy-2.4.3/src/struphy/ode/solvers.py +124 -0
  60. struphy-2.4.3/src/struphy/ode/tests/test_ode_feec.py +183 -0
  61. struphy-2.4.3/src/struphy/ode/utils.py +106 -0
  62. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/pic/accumulation/accum_kernels.py +24 -24
  63. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/pic/accumulation/accum_kernels_gc.py +15 -15
  64. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/pic/accumulation/particles_to_grid.py +4 -4
  65. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/pic/base.py +85 -66
  66. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/pic/pushing/pusher.py +1 -90
  67. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/pic/pushing/pusher_kernels.py +45 -45
  68. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/pic/pushing/pusher_kernels_gc.py +6 -6
  69. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/pic/tests/test_pic_legacy_files/accumulation_kernels_3d.py +631 -482
  70. struphy-2.4.3/src/struphy/pic/tests/test_pic_legacy_files/pusher_pos.py +2411 -0
  71. struphy-2.4.3/src/struphy/pic/tests/test_pic_legacy_files/pusher_vel_2d.py +696 -0
  72. struphy-2.4.3/src/struphy/pic/tests/test_pic_legacy_files/pusher_vel_3d.py +1521 -0
  73. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/pic/tests/test_pushers.py +4 -1
  74. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/pic/utilities_kernels.py +10 -10
  75. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/polar/basic.py +107 -158
  76. struphy-2.4.3/src/struphy/post_processing/likwid/hardware_dicts.py +61 -0
  77. struphy-2.4.3/src/struphy/post_processing/likwid/likwid_parser.py +579 -0
  78. struphy-2.4.3/src/struphy/post_processing/likwid/maxplotlylib.py +110 -0
  79. struphy-2.4.3/src/struphy/post_processing/likwid/plot_likwidproject.py +910 -0
  80. struphy-2.4.3/src/struphy/post_processing/likwid/plot_time_traces.py +189 -0
  81. struphy-2.4.3/src/struphy/post_processing/likwid/roofline_plotter.py +276 -0
  82. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/post_processing/post_processing_tools.py +3 -3
  83. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/post_processing/pproc_struphy.py +15 -0
  84. struphy-2.4.3/src/struphy/post_processing/profile_struphy.py +170 -0
  85. struphy-2.4.3/src/struphy/profiling/profiling.py +338 -0
  86. struphy-2.4.3/src/struphy/propagators/__init__.py +0 -0
  87. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/propagators/base.py +10 -1
  88. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/propagators/propagators_coupling.py +4 -1
  89. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/propagators/propagators_fields.py +1657 -2471
  90. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/propagators/propagators_markers.py +33 -6
  91. struphy-2.4.3/src/struphy/propagators/tests/__init__.py +0 -0
  92. struphy-2.4.3/src/struphy/propagators/tests/test_gyrokinetic_poisson.py +577 -0
  93. struphy-2.4.3/src/struphy/propagators/tests/test_poisson.py +429 -0
  94. struphy-2.4.2/src/struphy/psydac-2.4.2.dev0-py3-none-any.whl → struphy-2.4.3/src/struphy/psydac-2.4.3.dev0-py3-none-any.whl +0 -0
  95. struphy-2.4.3/src/struphy/utils/__init__.py +0 -0
  96. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/utils/clone_config.py +1 -1
  97. {struphy-2.4.2 → struphy-2.4.3/src/struphy.egg-info}/PKG-INFO +18 -10
  98. {struphy-2.4.2 → struphy-2.4.3}/src/struphy.egg-info/SOURCES.txt +15 -1
  99. {struphy-2.4.2 → struphy-2.4.3}/src/struphy.egg-info/requires.txt +15 -6
  100. struphy-2.4.2/src/struphy/bsplines/tests/test_eval_spline_mpi.py +0 -555
  101. struphy-2.4.2/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/fB_massless_kernels_control_variate.py +0 -427
  102. struphy-2.4.2/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/fnB_massless_cv_kernel_2.py +0 -30
  103. struphy-2.4.2/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/fnB_massless_kernels_control_variate.py +0 -459
  104. struphy-2.4.2/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/massless_cvker.py +0 -159
  105. struphy-2.4.2/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/massless_kernels_control_variate.py +0 -651
  106. struphy-2.4.2/src/struphy/eigenvalue_solvers/legacy/massless_operators/fB_bb_kernel.py +0 -298
  107. struphy-2.4.2/src/struphy/eigenvalue_solvers/legacy/massless_operators/fB_bv_kernel.py +0 -485
  108. struphy-2.4.2/src/struphy/eigenvalue_solvers/legacy/massless_operators/fB_vv_kernel.py +0 -569
  109. struphy-2.4.2/src/struphy/eigenvalue_solvers/legacy/projectors_local/pro_local/kernels_projectors_local_mhd.py +0 -372
  110. struphy-2.4.2/src/struphy/eigenvalue_solvers/legacy/projectors_local/shape_pro_local/shape_L2_projector_kernel.py +0 -1474
  111. struphy-2.4.2/src/struphy/eigenvalue_solvers/legacy/projectors_local/shape_pro_local/shape_local_projector_kernel.py +0 -1990
  112. struphy-2.4.2/src/struphy/feec/variational_utilities.py +0 -284
  113. struphy-2.4.2/src/struphy/pic/tests/test_pic_legacy_files/pusher_pos.py +0 -1542
  114. struphy-2.4.2/src/struphy/pic/tests/test_pic_legacy_files/pusher_vel_2d.py +0 -443
  115. struphy-2.4.2/src/struphy/pic/tests/test_pic_legacy_files/pusher_vel_3d.py +0 -970
  116. struphy-2.4.2/src/struphy/post_processing/profile_struphy.py +0 -165
  117. struphy-2.4.2/src/struphy/profiling/profiling.py +0 -176
  118. struphy-2.4.2/src/struphy/propagators/tests/test_gyrokinetic_poisson.py +0 -590
  119. struphy-2.4.2/src/struphy/propagators/tests/test_poisson.py +0 -431
  120. {struphy-2.4.2 → struphy-2.4.3}/LICENSE +0 -0
  121. {struphy-2.4.2 → struphy-2.4.3}/setup.cfg +0 -0
  122. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/__init__.py +0 -0
  123. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/bsplines/__init__.py +0 -0
  124. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/bsplines/bsplines.py +0 -0
  125. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/bsplines/bsplines_kernels.py +0 -0
  126. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/bsplines/evaluation_kernels_1d.py +0 -0
  127. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/bsplines/evaluation_kernels_2d.py +0 -0
  128. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/bsplines/evaluation_kernels_3d.py +0 -0
  129. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/bsplines/shapefunc_kernels.py +0 -0
  130. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/bsplines/tests/__init__.py +0 -0
  131. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/bsplines/tests/test_bsplines_kernels.py +0 -0
  132. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/compile_struphy.mk +0 -0
  133. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/conftest.py +0 -0
  134. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/console/__init__.py +0 -0
  135. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/console/params.py +0 -0
  136. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/console/profile.py +0 -0
  137. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/console/test.py +0 -0
  138. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/console/units.py +0 -0
  139. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/dependencies.py +0 -0
  140. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/diagnostics/__init__.py +0 -0
  141. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/diagnostics/console_diagn.py +0 -0
  142. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/diagnostics/continuous_spectra.py +0 -0
  143. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/diagnostics/diagn_tools.py +0 -0
  144. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/diagnostics/paraview/__init__.py +0 -0
  145. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/diagnostics/paraview/vtk_writer.py +0 -0
  146. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/dispersion_relations/__init__.py +0 -0
  147. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/dispersion_relations/analytic.py +0 -0
  148. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/dispersion_relations/base.py +0 -0
  149. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/dispersion_relations/utilities.py +0 -0
  150. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/__init__.py +0 -0
  151. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/derivatives.py +0 -0
  152. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/kernels_projectors_global.py +0 -0
  153. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/MHD_eigenvalues_cylinder_1D.py +0 -0
  154. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/__init__.py +0 -0
  155. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/control_variates/__init__.py +0 -0
  156. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/control_variates/control_variate.py +0 -0
  157. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/__init__.py +0 -0
  158. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/fB_massless_control_variate.py +0 -0
  159. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/fnB_massless_control_variate.py +0 -0
  160. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/massless_control_variate.py +0 -0
  161. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/emw_operators.py +0 -0
  162. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/inner_products_1d.py +0 -0
  163. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/inner_products_2d.py +0 -0
  164. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/inner_products_3d.py +0 -0
  165. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/l2_error_1d.py +0 -0
  166. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/l2_error_2d.py +0 -0
  167. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/l2_error_3d.py +0 -0
  168. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/mass_matrices_3d_pre.py +0 -0
  169. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/massless_operators/__init__.py +0 -0
  170. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/eigenvalue_solvers/legacy/massless_operators/fB_arrays.py +0 -0
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  331. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/pic/tests/test_sorting.py +0 -0
  332. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/pic/tests/test_sph.py +0 -0
  333. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/pic/tests/test_tesselation.py +0 -0
  334. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/pic/utilities.py +0 -0
  335. {struphy-2.4.2/src/struphy/post_processing → struphy-2.4.3/src/struphy/polar}/__init__.py +0 -0
  336. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/polar/extraction_operators.py +0 -0
  337. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/polar/linear_operators.py +0 -0
  338. {struphy-2.4.2/src/struphy/post_processing/orbits → struphy-2.4.3/src/struphy/polar/tests}/__init__.py +0 -0
  339. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/polar/tests/test_legacy_polar_splines.py +0 -0
  340. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/polar/tests/test_polar.py +0 -0
  341. {struphy-2.4.2/src/struphy/post_processing/tests → struphy-2.4.3/src/struphy/post_processing}/__init__.py +0 -0
  342. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/post_processing/cprofile_analyser.py +0 -0
  343. {struphy-2.4.2/src/struphy/profiling → struphy-2.4.3/src/struphy/post_processing/likwid}/__init__.py +0 -0
  344. {struphy-2.4.2/src/struphy/propagators → struphy-2.4.3/src/struphy/post_processing/orbits}/__init__.py +0 -0
  345. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/post_processing/orbits/orbits_kernels.py +0 -0
  346. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/post_processing/orbits/orbits_tools.py +0 -0
  347. {struphy-2.4.2/src/struphy/propagators → struphy-2.4.3/src/struphy/post_processing}/tests/__init__.py +0 -0
  348. {struphy-2.4.2/src/struphy/utils → struphy-2.4.3/src/struphy/profiling}/__init__.py +0 -0
  349. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/tutorials/tests/test_tutorials.py +0 -0
  350. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/utils/test_clone_config.py +0 -0
  351. {struphy-2.4.2 → struphy-2.4.3}/src/struphy/utils/utils.py +0 -0
  352. {struphy-2.4.2 → struphy-2.4.3}/src/struphy.egg-info/dependency_links.txt +0 -0
  353. {struphy-2.4.2 → struphy-2.4.3}/src/struphy.egg-info/entry_points.txt +0 -0
  354. {struphy-2.4.2 → struphy-2.4.3}/src/struphy.egg-info/top_level.txt +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: struphy
3
- Version: 2.4.2
3
+ Version: 2.4.3
4
4
  Summary: Multi-model plasma physics package
5
5
  Author: Max Planck Institute for Plasma Physics
6
6
  Author-email: stefan.possanner@ipp.mpg.de, eric.sonnendruecker@ipp.mpg.de
@@ -40,13 +40,12 @@ Requires-Dist: pyyaml
40
40
  Requires-Dist: vtk
41
41
  Requires-Dist: tqdm
42
42
  Requires-Dist: argcomplete
43
- Requires-Dist: gvec-to-python
44
- Requires-Dist: desc-opt
45
- Provides-Extra: test
46
- Requires-Dist: pytest; extra == "test"
47
- Requires-Dist: pytest-mpi; extra == "test"
43
+ Requires-Dist: pytest
44
+ Requires-Dist: pytest-mpi
45
+ Provides-Extra: phys
46
+ Requires-Dist: gvec-to-python; extra == "phys"
47
+ Requires-Dist: desc-opt; extra == "phys"
48
48
  Provides-Extra: dev
49
- Requires-Dist: struphy[test]; extra == "dev"
50
49
  Requires-Dist: notebook; extra == "dev"
51
50
  Requires-Dist: autopep8; extra == "dev"
52
51
  Requires-Dist: isort; extra == "dev"
@@ -55,7 +54,10 @@ Requires-Dist: pylint; extra == "dev"
55
54
  Requires-Dist: add-trailing-comma; extra == "dev"
56
55
  Requires-Dist: ruff>=0.9.1; extra == "dev"
57
56
  Requires-Dist: pre-commit; extra == "dev"
57
+ Requires-Dist: nbstripout; extra == "dev"
58
+ Requires-Dist: tabulate; extra == "dev"
58
59
  Provides-Extra: doc
60
+ Requires-Dist: struphy[phys]; extra == "doc"
59
61
  Requires-Dist: sphinx; extra == "doc"
60
62
  Requires-Dist: sphinx-design; extra == "doc"
61
63
  Requires-Dist: lxml_html_clean; extra == "doc"
@@ -67,6 +69,12 @@ Requires-Dist: myst-parser; extra == "doc"
67
69
  Requires-Dist: mistune; extra == "doc"
68
70
  Requires-Dist: docutils; extra == "doc"
69
71
  Requires-Dist: ipyparallel; extra == "doc"
72
+ Provides-Extra: likwid
73
+ Requires-Dist: struphy[dev]; extra == "likwid"
74
+ Requires-Dist: kaleido; extra == "likwid"
75
+ Requires-Dist: pylikwid; extra == "likwid"
76
+ Requires-Dist: pandas; extra == "likwid"
77
+ Requires-Dist: plotly; extra == "likwid"
70
78
  Dynamic: license-file
71
79
 
72
80
  # Struphy - Structure-preserving hybrid codes
@@ -82,13 +90,13 @@ See the [Struphy pages](https://struphy.pages.mpcdf.de/struphy/index.html) for d
82
90
 
83
91
  Use a virtual environment:
84
92
 
85
- python3 -m pip install -U virtualenv
93
+ python3 -m pip install --upgrade virtualenv
86
94
  python3 -m venv struphy_env
87
95
  source struphy_env/bin/activate
88
96
 
89
- Install latest release (with test packages):
97
+ Install latest release:
90
98
 
91
- pip install --no-cache-dir -U struphy[test]
99
+ pip install --no-cache-dir --upgrade struphy
92
100
 
93
101
  Compile kernels:
94
102
 
@@ -11,13 +11,13 @@ See the [Struphy pages](https://struphy.pages.mpcdf.de/struphy/index.html) for d
11
11
 
12
12
  Use a virtual environment:
13
13
 
14
- python3 -m pip install -U virtualenv
14
+ python3 -m pip install --upgrade virtualenv
15
15
  python3 -m venv struphy_env
16
16
  source struphy_env/bin/activate
17
17
 
18
- Install latest release (with test packages):
18
+ Install latest release:
19
19
 
20
- pip install --no-cache-dir -U struphy[test]
20
+ pip install --no-cache-dir --upgrade struphy
21
21
 
22
22
  Compile kernels:
23
23
 
@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
4
4
 
5
5
  [project]
6
6
  name = "struphy"
7
- version = "2.4.2"
7
+ version = "2.4.3"
8
8
  readme = "README.md"
9
9
  requires-python = ">=3.10"
10
10
  license = {file = "LICENSE"}
@@ -29,17 +29,16 @@ dependencies = [
29
29
  'vtk',
30
30
  'tqdm',
31
31
  'argcomplete',
32
- 'gvec-to-python',
33
- 'desc-opt',
32
+ 'pytest',
33
+ 'pytest-mpi',
34
34
  ]
35
35
 
36
36
  [project.optional-dependencies]
37
- test = [
38
- 'pytest',
39
- 'pytest-mpi',
37
+ phys = [
38
+ 'gvec-to-python',
39
+ 'desc-opt',
40
40
  ]
41
41
  dev = [
42
- 'struphy[test]',
43
42
  'notebook',
44
43
  'autopep8',
45
44
  'isort',
@@ -48,8 +47,11 @@ dev = [
48
47
  'add-trailing-comma',
49
48
  'ruff>=0.9.1',
50
49
  'pre-commit',
50
+ 'nbstripout',
51
+ 'tabulate',
51
52
  ]
52
53
  doc = [
54
+ 'struphy[phys]',
53
55
  'sphinx',
54
56
  'sphinx-design',
55
57
  'lxml_html_clean',
@@ -62,6 +64,13 @@ doc = [
62
64
  'docutils',
63
65
  'ipyparallel',
64
66
  ]
67
+ likwid = [
68
+ 'struphy[dev]',
69
+ 'kaleido',
70
+ 'pylikwid',
71
+ 'pandas',
72
+ 'plotly',
73
+ ]
65
74
 
66
75
 
67
76
  [project.urls]
@@ -99,7 +108,7 @@ kinetic-diagnostics = "struphy.diagnostics.console_diagn:main"
99
108
  ]
100
109
 
101
110
  struphy = ['compile_struphy.mk',
102
- 'psydac-2.4.2.dev0-py3-none-any.whl',]
111
+ 'psydac-2.4.3.dev0-py3-none-any.whl',]
103
112
 
104
113
  [tool.autopep8]
105
114
  # Add specific settings for autopep8