struphy 2.4.0__tar.gz → 2.4.1__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {struphy-2.4.0/src/struphy.egg-info → struphy-2.4.1}/PKG-INFO +1 -2
- {struphy-2.4.0 → struphy-2.4.1}/pyproject.toml +4 -3
- struphy-2.4.1/src/struphy/bsplines/evaluation_kernels_3d.py +1679 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/conftest.py +10 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/console/compile.py +8 -3
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/console/main.py +29 -3
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/console/run.py +6 -0
- struphy-2.4.1/src/struphy/console/test.py +179 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/console/tests/test_console.py +14 -3
- struphy-2.4.1/src/struphy/diagnostics/console_diagn.py +410 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/diagnostics/continuous_spectra.py +2 -1
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/diagnostics/diagn_tools.py +354 -344
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/dispersion_relations/analytic.py +1 -1
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/examples/_draw_parallel.py +18 -17
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/feec/basis_projection_ops.py +3 -2
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/feec/mass.py +3 -15
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/feec/projectors.py +1 -1
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/feec/psydac_derham.py +327 -448
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/feec/tests/test_basis_ops.py +279 -310
- struphy-2.4.1/src/struphy/feec/tests/test_eval_field.py +533 -0
- struphy-2.4.1/src/struphy/feec/tests/test_field_init.py +1372 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/feec/tests/test_l2_projectors.py +70 -68
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/feec/tests/test_local_projectors.py +1 -1
- struphy-2.4.1/src/struphy/feec/tests/test_lowdim_nel_is_1.py +317 -0
- struphy-2.4.1/src/struphy/feec/tests/test_mass_matrices.py +1154 -0
- {struphy-2.4.0/src/struphy/fields_background/mhd_equil → struphy-2.4.1/src/struphy/fields_background}/base.py +687 -315
- {struphy-2.4.0/src/struphy/fields_background/mhd_equil → struphy-2.4.1/src/struphy/fields_background}/equils.py +287 -148
- struphy-2.4.1/src/struphy/fields_background/generic.py +79 -0
- struphy-2.4.1/src/struphy/fields_background/projected_equils.py +375 -0
- struphy-2.4.1/src/struphy/fields_background/tests/test_desc_equil.py +233 -0
- struphy-2.4.1/src/struphy/fields_background/tests/test_generic_equils.py +92 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/fields_background/tests/test_gvec_equil.py +1 -1
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/fields_background/tests/test_mhd_equils.py +429 -323
- struphy-2.4.1/src/struphy/fields_background/tests/test_numerical_mhd_equil.py +131 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/geometry/base.py +161 -80
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/geometry/domains.py +51 -42
- struphy-2.4.1/src/struphy/geometry/evaluation_kernels.py +952 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/geometry/mappings_kernels.py +173 -174
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/geometry/utilities.py +193 -48
- struphy-2.4.1/src/struphy/initial/eigenfunctions.py +197 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/initial/perturbations.py +16 -63
- struphy-2.4.1/src/struphy/initial/tests/test_init_perturbations.py +318 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/initial/utilities.py +23 -24
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/io/inp/parameters.yml +43 -46
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/io/inp/tutorials/params_02.yml +10 -12
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/io/inp/tutorials/params_04a.yml +6 -8
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/io/inp/tutorials/params_04b.yml +6 -9
- struphy-2.4.1/src/struphy/io/inp/verification/IsothermalEulerSPH_soundwave.yml +47 -0
- struphy-2.4.1/src/struphy/io/inp/verification/LinearVlasovAmpereOneSpecies_weakLandau.yml +67 -0
- struphy-2.4.1/src/struphy/io/inp/verification/VlasovAmpereOneSpecies_weakLandau.yml +66 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/io/setup.py +35 -240
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/kinetic_background/base.py +253 -106
- struphy-2.4.1/src/struphy/kinetic_background/maxwellians.py +602 -0
- struphy-2.4.1/src/struphy/kinetic_background/moment_functions.py +54 -0
- struphy-2.4.1/src/struphy/kinetic_background/tests/test_maxwellians.py +1649 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/main.py +37 -22
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/models/base.py +399 -440
- struphy-2.4.1/src/struphy/models/fluid.py +1476 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/models/hybrid.py +46 -46
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/models/kinetic.py +72 -76
- struphy-2.4.1/src/struphy/models/tests/test_fluid_models.py +121 -0
- struphy-2.4.1/src/struphy/models/tests/test_hybrid_models.py +108 -0
- struphy-2.4.1/src/struphy/models/tests/test_kinetic_models.py +108 -0
- struphy-2.4.1/src/struphy/models/tests/test_toy_models.py +110 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/models/tests/test_xxpproc.py +20 -33
- struphy-2.4.1/src/struphy/models/tests/util.py +289 -0
- struphy-2.4.1/src/struphy/models/tests/verification.py +239 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/models/toy.py +40 -41
- struphy-2.4.1/src/struphy/pic/accumulation/accum_kernels.py +1506 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/pic/accumulation/particles_to_grid.py +17 -11
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/pic/base.py +1654 -863
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/pic/particles.py +189 -231
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/pic/pushing/eval_kernels_gc.py +256 -105
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/pic/pushing/pusher.py +118 -107
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/pic/pushing/pusher_args_kernels.py +63 -28
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/pic/pushing/pusher_kernels.py +253 -363
- struphy-2.4.1/src/struphy/pic/sampling_kernels.py +118 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/pic/sorting_kernels.py +37 -5
- struphy-2.4.1/src/struphy/pic/sph_eval_kernels.py +518 -0
- struphy-2.4.1/src/struphy/pic/sph_smoothing_kernels.py +654 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/pic/tests/test_accum_vec_H1.py +17 -16
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/pic/tests/test_accumulation.py +326 -165
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/pic/tests/test_binning.py +115 -131
- struphy-2.4.1/src/struphy/pic/tests/test_draw_parallel.py +143 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/pic/tests/test_pushers.py +291 -185
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/pic/tests/test_sorting.py +9 -7
- struphy-2.4.1/src/struphy/pic/tests/test_sph.py +158 -0
- struphy-2.4.1/src/struphy/pic/tests/test_tesselation.py +194 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/post_processing/post_processing_tools.py +216 -160
- struphy-2.4.1/src/struphy/post_processing/pproc_struphy.py +276 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/propagators/base.py +7 -7
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/propagators/propagators_coupling.py +4 -637
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/propagators/propagators_fields.py +548 -134
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/propagators/propagators_markers.py +168 -29
- struphy-2.4.0/src/struphy/psydac-2.4.0-py3-none-any.whl → struphy-2.4.1/src/struphy/psydac-2.4.1-py3-none-any.whl +0 -0
- struphy-2.4.1/src/struphy/tutorials/tests/test_tutorials.py +175 -0
- struphy-2.4.1/src/struphy/utils/clone_config.py +222 -0
- struphy-2.4.1/src/struphy/utils/test_clone_config.py +39 -0
- struphy-2.4.1/src/struphy/utils/utils.py +102 -0
- {struphy-2.4.0 → struphy-2.4.1/src/struphy.egg-info}/PKG-INFO +1 -2
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy.egg-info/SOURCES.txt +16 -9
- struphy-2.4.1/src/struphy.egg-info/entry_points.txt +3 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy.egg-info/requires.txt +0 -1
- struphy-2.4.0/src/struphy/bsplines/evaluation_kernels_3d.py +0 -1095
- struphy-2.4.0/src/struphy/console/test.py +0 -137
- struphy-2.4.0/src/struphy/diagnostics/console_diagn.py +0 -280
- struphy-2.4.0/src/struphy/feec/tests/test_eval_field.py +0 -276
- struphy-2.4.0/src/struphy/feec/tests/test_field_init.py +0 -1191
- struphy-2.4.0/src/struphy/feec/tests/test_lowdim_nel_is_1.py +0 -290
- struphy-2.4.0/src/struphy/feec/tests/test_mass_matrices.py +0 -1227
- struphy-2.4.0/src/struphy/fields_background/braginskii_equil/base.py +0 -550
- struphy-2.4.0/src/struphy/fields_background/braginskii_equil/equils.py +0 -120
- struphy-2.4.0/src/struphy/fields_background/fluid_equils/base.py +0 -366
- struphy-2.4.0/src/struphy/fields_background/fluid_equils/equils.py +0 -49
- struphy-2.4.0/src/struphy/fields_background/mhd_equil/projected_equils.py +0 -291
- struphy-2.4.0/src/struphy/fields_background/tests/test_desc_equil.py +0 -220
- struphy-2.4.0/src/struphy/fields_background/tests/test_numerical_mhd_equil.py +0 -152
- struphy-2.4.0/src/struphy/geometry/evaluation_kernels.py +0 -551
- struphy-2.4.0/src/struphy/initial/eigenfunctions.py +0 -193
- struphy-2.4.0/src/struphy/initial/tests/test_init_perturbations.py +0 -339
- struphy-2.4.0/src/struphy/kinetic_background/maxwellians.py +0 -1392
- struphy-2.4.0/src/struphy/kinetic_background/tests/test_maxwellians.py +0 -1830
- struphy-2.4.0/src/struphy/models/fluid.py +0 -1126
- struphy-2.4.0/src/struphy/models/tests/test_fluid_models.py +0 -53
- struphy-2.4.0/src/struphy/models/tests/test_hybrid_models.py +0 -53
- struphy-2.4.0/src/struphy/models/tests/test_kinetic_models.py +0 -53
- struphy-2.4.0/src/struphy/models/tests/test_toy_models.py +0 -42
- struphy-2.4.0/src/struphy/models/tests/util.py +0 -214
- struphy-2.4.0/src/struphy/pic/accumulation/accum_kernels.py +0 -1744
- struphy-2.4.0/src/struphy/pic/sampling_kernels.py +0 -88
- struphy-2.4.0/src/struphy/pic/sph_eval_kernels.py +0 -239
- struphy-2.4.0/src/struphy/pic/tests/test_draw_parallel.py +0 -115
- struphy-2.4.0/src/struphy/pic/tests/test_sph.py +0 -74
- struphy-2.4.0/src/struphy/post_processing/pproc_struphy.py +0 -285
- struphy-2.4.0/src/struphy/tutorials/tests/test_tutorials.py +0 -175
- struphy-2.4.0/src/struphy/utils/utils.py +0 -77
- struphy-2.4.0/src/struphy.egg-info/entry_points.txt +0 -2
- {struphy-2.4.0 → struphy-2.4.1}/LICENSE +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/README.md +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/setup.cfg +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/__init__.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/bsplines/__init__.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/bsplines/bsplines.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/bsplines/bsplines_kernels.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/bsplines/evaluation_kernels_1d.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/bsplines/evaluation_kernels_2d.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/bsplines/shapefunc_kernels.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/bsplines/tests/__init__.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/bsplines/tests/test_bsplines_kernels.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/bsplines/tests/test_eval_spline_mpi.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/compile_struphy.mk +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/console/__init__.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/console/format.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/console/params.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/console/pproc.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/console/profile.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/console/units.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/dependencies.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/diagnostics/__init__.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/diagnostics/paraview/__init__.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/diagnostics/paraview/mesh_creator.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/diagnostics/paraview/vtk_writer.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/dispersion_relations/__init__.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/dispersion_relations/base.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/dispersion_relations/utilities.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/eigenvalue_solvers/__init__.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/eigenvalue_solvers/derivatives.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/eigenvalue_solvers/kernels_2d.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/eigenvalue_solvers/kernels_3d.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/eigenvalue_solvers/kernels_projectors_global.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/eigenvalue_solvers/kernels_projectors_global_mhd.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/eigenvalue_solvers/legacy/MHD_eigenvalues_cylinder_1D.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/eigenvalue_solvers/legacy/__init__.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/eigenvalue_solvers/legacy/control_variates/__init__.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/eigenvalue_solvers/legacy/control_variates/control_variate.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/eigenvalue_solvers/legacy/control_variates/kernels_control_variate.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/__init__.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/fB_massless_control_variate.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/fB_massless_kernels_control_variate.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/fnB_massless_control_variate.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/fnB_massless_cv_kernel_2.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/fnB_massless_kernels_control_variate.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/massless_control_variate.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/massless_cvker.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/eigenvalue_solvers/legacy/control_variates/kinetic_extended/massless_kernels_control_variate.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/eigenvalue_solvers/legacy/emw_operators.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/eigenvalue_solvers/legacy/inner_products_1d.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/eigenvalue_solvers/legacy/inner_products_2d.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/eigenvalue_solvers/legacy/inner_products_3d.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/eigenvalue_solvers/legacy/l2_error_1d.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/eigenvalue_solvers/legacy/l2_error_2d.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/eigenvalue_solvers/legacy/l2_error_3d.py +0 -0
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- {struphy-2.4.0 → struphy-2.4.1}/src/struphy/utils/__init__.py +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy.egg-info/dependency_links.txt +0 -0
- {struphy-2.4.0 → struphy-2.4.1}/src/struphy.egg-info/top_level.txt +0 -0
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@@ -1,6 +1,6 @@
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Metadata-Version: 2.2
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Name: struphy
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Version: 2.4.
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Version: 2.4.1
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Summary: Multi-model plasma physics package
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Author: Max Planck Institute for Plasma Physics
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Author-email: stefan.possanner@ipp.mpg.de, eric.sonnendruecker@ipp.mpg.de
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@@ -42,7 +42,6 @@ Requires-Dist: tqdm
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Requires-Dist: argcomplete
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Requires-Dist: gvec-to-python
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Requires-Dist: desc-opt
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Requires-Dist: netcdf4<1.7
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Provides-Extra: test
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Requires-Dist: pytest; extra == "test"
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Requires-Dist: pytest-mpi; extra == "test"
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@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
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[project]
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name = "struphy"
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version = "2.4.
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version = "2.4.1"
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readme = "README.md"
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requires-python = ">=3.10"
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license = {file = "LICENSE"}
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@@ -31,7 +31,6 @@ dependencies = [
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'argcomplete',
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'gvec-to-python',
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'desc-opt',
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'netcdf4<1.7',
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]
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[project.optional-dependencies]
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@@ -74,6 +73,7 @@ changelog = "https://gitlab.mpcdf.mpg.de/struphy/struphy/-/blob/devel/CHANGELOG.
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[project.scripts]
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struphy = "struphy.console.main:struphy"
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kinetic-diagnostics = "struphy.diagnostics.console_diagn:main"
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[tool.setuptools.package-data]
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'struphy.fields_background.mhd_equil.eqdsk' = [
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'tests/*.yml',
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'tutorials/*.yml',
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'longer_examples/*.yml',
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'verification/*.yml',
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]
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struphy = ['compile_struphy.mk',
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'psydac-2.4.
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'psydac-2.4.1-py3-none-any.whl',]
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[tool.autopep8]
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# Add specific settings for autopep8
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