starccato-lvk 0.0.2__tar.gz

starccato_lvk-0.0.2/.github/workflows/pypi.yml

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+name: Release
+
+#on:
+#  push:
+#    branches:
+#      - main
+#  workflow_run:
+#    workflows: ['Tests and Coverage']
+#    types:
+#      - completed
+
+on:
+  workflow_dispatch:
+
+
+jobs:
+
+  release:
+    runs-on: ubuntu-latest
+    concurrency: release
+    permissions:
+      id-token: write
+      contents: write
+
+    steps:
+      - uses: actions/checkout@v4.2.2
+        with:
+          fetch-depth: 0
+          ref: main       # Replace with your branch
+
+      - uses: actions/setup-python@v5
+        with:
+          python-version: '3.11'
+          cache: 'pip' # Enable caching for pip dependencies
+
+
+      - name: Semantic Version Release
+        id: release
+        # Adjust tag with desired version if applicable.
+        uses: python-semantic-release/python-semantic-release@v9.12.0
+        with:
+          github_token: ${{ secrets.GITHUB_TOKEN }}
+          git_committer_name: "github-actions"
+          git_committer_email: "actions@users.noreply.github.com"
+
+
+      - name: build dist for pypi
+        if: steps.release.outputs.released == 'true'
+        run: |
+          python -m pip install --upgrade build
+          python -m build --sdist --wheel --outdir dist/
+
+      - name: pypi-publish
+        if: steps.release.outputs.released == 'true'
+        uses: pypa/gh-action-pypi-publish@v1.12.3

starccato_lvk-0.0.2/.gitignore

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+# Byte-compiled / optimized / DLL files
+__pycache__/
+*.py[cod]
+*$py.class
+*_version.py
+# C extensions
+*.so
+*.txt
+*.npy
+# Distribution / packaging
+.Python
+outdir
+outdir*
+build/
+develop-eggs/
+dist/
+downloads/
+eggs/
+.eggs/
+lib/
+lib64/
+parts/
+sdist/
+var/
+wheels/
+share/python-wheels/
+*.egg-info/
+.installed.cfg
+*.egg
+MANIFEST
+*.csv
+*.hdf5
+# PyInstaller
+#  Usually these files are written by a python script from a template
+#  before PyInstaller builds the exe, so as to inject date/other infos into it.
+*.manifest
+*.spec
+
+# Installer logs
+pip-log.txt
+pip-delete-this-directory.txt
+
+# Unit test / coverage reports
+htmlcov/
+.tox/
+.nox/
+.coverage
+.coverage.*
+.cache
+nosetests.xml
+coverage.xml
+*.cover
+*.py,cover
+.hypothesis/
+.pytest_cache/
+cover/
+
+# Translations
+*.mo
+*.pot
+
+# Django stuff:
+*.log
+local_settings.py
+db.sqlite3
+db.sqlite3-journal
+
+# Flask stuff:
+instance/
+.webassets-cache
+
+# Scrapy stuff:
+.scrapy
+
+# Sphinx documentation
+docs/_build/
+
+# PyBuilder
+.pybuilder/
+target/
+
+# Jupyter Notebook
+.ipynb_checkpoints
+
+# IPython
+profile_default/
+ipython_config.py
+
+# pyenv
+#   For a library or package, you might want to ignore these files since the code is
+#   intended to run in multiple environments; otherwise, check them in:
+# .python-version
+
+# pipenv
+#   According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
+#   However, in case of collaboration, if having platform-specific dependencies or dependencies
+#   having no cross-platform support, pipenv may install dependencies that don't work, or not
+#   install all needed dependencies.
+#Pipfile.lock
+
+# UV
+#   Similar to Pipfile.lock, it is generally recommended to include uv.lock in version control.
+#   This is especially recommended for binary packages to ensure reproducibility, and is more
+#   commonly ignored for libraries.
+#uv.lock
+
+# poetry
+#   Similar to Pipfile.lock, it is generally recommended to include poetry.lock in version control.
+#   This is especially recommended for binary packages to ensure reproducibility, and is more
+#   commonly ignored for libraries.
+#   https://python-poetry.org/docs/basic-usage/#commit-your-poetrylock-file-to-version-control
+#poetry.lock
+
+# pdm
+#   Similar to Pipfile.lock, it is generally recommended to include pdm.lock in version control.
+#pdm.lock
+#   pdm stores project-wide configurations in .pdm.toml, but it is recommended to not include it
+#   in version control.
+#   https://pdm.fming.dev/latest/usage/project/#working-with-version-control
+.pdm.toml
+.pdm-python
+.pdm-build/
+
+# PEP 582; used by e.g. github.com/David-OConnor/pyflow and github.com/pdm-project/pdm
+__pypackages__/
+
+# Celery stuff
+celerybeat-schedule
+celerybeat.pid
+
+# SageMath parsed files
+*.sage.py
+
+# Environments
+.env
+.venv
+env/
+venv/
+ENV/
+env.bak/
+venv.bak/
+
+# Spyder project settings
+.spyderproject
+.spyproject
+
+# Rope project settings
+.ropeproject
+
+# mkdocs documentation
+/site
+
+# mypy
+.mypy_cache/
+.dmypy.json
+dmypy.json
+
+# Pyre type checker
+.pyre/
+
+
+*.DS_Store
+*.csv
+
+# pytype static type analyzer
+.pytype/
+
+# Cython debug symbols
+cython_debug/
+
+# PyCharm
+#  JetBrains specific template is maintained in a separate JetBrains.gitignore that can
+#  be found at https://github.com/github/gitignore/blob/main/Global/JetBrains.gitignore
+#  and can be added to the global gitignore or merged into this file.  For a more nuclear
+#  option (not recommended) you can uncomment the following to ignore the entire idea folder.
+#.idea/
+
+# PyPI configuration file
+.pypirc
+
+*.png
+*.hdf5
+*.h5

starccato_lvk-0.0.2/CHANGELOG.rst

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+.. _changelog:
+
+=========
+CHANGELOG
+=========
+
+
+.. _changelog-v0.0.2:
+
+v0.0.2 (2025-10-06)
+===================
+
+Bug Fixes
+---------
+
+* fix: pypi error (`ebf36f5`_)
+
+Unknown
+-------
+
+* Merge branch 'main' of github.com:starccato/starccato_lvk (`740d1bd`_)
+
+.. _ebf36f5: https://github.com/starccato/starccato_lvk/commit/ebf36f55556f10e3df2e5e8fc465f6cb41458de2
+.. _740d1bd: https://github.com/starccato/starccato_lvk/commit/740d1bd26d06f8031053ebd20a88551bff50092b
+
+
+.. _changelog-v0.0.1:
+
+v0.0.1 (2025-10-06)
+===================
+
+Bug Fixes
+---------
+
+* fix: add missing packages to pyproj (`f0e254f`_)
+
+Chores
+------
+
+* chore(release): 0.0.1 (`68f7303`_)
+
+Unknown
+-------
+
+* add readme to pyproj (`887d746`_)
+
+* add scipy (`1e7866a`_)
+
+* add prior adjustment (`5c5c8e1`_)
+
+* remove old sampler (`37dfaab`_)
+
+* add main runner interface (`97f9ada`_)
+
+* add sampler (`ef11073`_)
+
+* Remove whitened strain (`7528350`_)
+
+* add workign analysis with real data (`bdeab68`_)
+
+* add minimim SNR test (`844e5c2`_)
+
+* passing with correct psd normalisation (`0b0c059`_)
+
+* simplify test (`173b2f7`_)
+
+* Added more testing (`4eebcfc`_)
+
+* Add fixed time_shift, mre diagnostics, plot the interp PSD (`abcded7`_)
+
+* Add fixed ampliitude (`c34c3ba`_)
+
+* Add simulated PSD test (`39ef54d`_)
+
+* add testing for lnl (`3c6cfca`_)
+
+* hacking on PE (`c060500`_)
+
+* add sampler (`aaf4cfe`_)
+
+* hacking on lnl (`dabb9ef`_)
+
+* add new exe (`66e63a8`_)
+
+* fix float to int bug (`0bdf931`_)
+
+* remove invalid help in click (`c0f0154`_)
+
+* remove invalid help in click (`1d6c00f`_)
+
+* get trigger data for blips and noise (`96004b8`_)
+
+* adjust start stop (`c3c6359`_)
+
+* add pyproj commands (`d4da95d`_)
+
+* more hackig on data acquisition (`e8897db`_)
+
+* add notes (`e86679f`_)
+
+* add testing (`f6b96d3`_)
+
+* add notes (`79134c1`_)
+
+* hacking on lnl (`31f0ce0`_)
+
+* Initial commit (`6974955`_)
+
+.. _f0e254f: https://github.com/starccato/starccato_lvk/commit/f0e254f87b6aef4a9c0cf757475854da40fb134e
+.. _68f7303: https://github.com/starccato/starccato_lvk/commit/68f7303fcdbfa352d87894634e79782ea4cf1dcb
+.. _887d746: https://github.com/starccato/starccato_lvk/commit/887d7467702e22660d918c14a11925d4b1edc274
+.. _1e7866a: https://github.com/starccato/starccato_lvk/commit/1e7866af19444f5b95458b1b17cc3436372d3aef
+.. _5c5c8e1: https://github.com/starccato/starccato_lvk/commit/5c5c8e1dc18dfafcdc8c761f23700fee3daa9377
+.. _37dfaab: https://github.com/starccato/starccato_lvk/commit/37dfaab5cd6b932205d8925aff74b1fcc02bf625
+.. _97f9ada: https://github.com/starccato/starccato_lvk/commit/97f9ada52621c10bb8bc80beb0bd01fe58af4364
+.. _ef11073: https://github.com/starccato/starccato_lvk/commit/ef11073835b6731d08c9643f1d102ef7a6c09ac4
+.. _7528350: https://github.com/starccato/starccato_lvk/commit/75283506f03b567042ac21971e3d3f33b1c1f6bd
+.. _bdeab68: https://github.com/starccato/starccato_lvk/commit/bdeab68b68fb7fca51417ec6758fdb5fceaa4306
+.. _844e5c2: https://github.com/starccato/starccato_lvk/commit/844e5c259ffd4a7e7ab4483ccef904ed0b21e457
+.. _0b0c059: https://github.com/starccato/starccato_lvk/commit/0b0c05938fe160c60abe708f687cd5e9fdb64cc8
+.. _173b2f7: https://github.com/starccato/starccato_lvk/commit/173b2f7c10bbe58c3ae90189d5e4c77003ffdb9b
+.. _4eebcfc: https://github.com/starccato/starccato_lvk/commit/4eebcfc5a2c1ad8c0cd81e133aa2b72fbd2acc3a
+.. _abcded7: https://github.com/starccato/starccato_lvk/commit/abcded72d4a6b3dab06d640d816cab26baf943bb
+.. _c34c3ba: https://github.com/starccato/starccato_lvk/commit/c34c3ba3f0148a0bce260af6264abea5f5c70fba
+.. _39ef54d: https://github.com/starccato/starccato_lvk/commit/39ef54d3eec58618be222bc72b42cc1d8842cc8e
+.. _3c6cfca: https://github.com/starccato/starccato_lvk/commit/3c6cfcaccace8ba14475a077153d563ee072dd63
+.. _c060500: https://github.com/starccato/starccato_lvk/commit/c0605003b23036a49e6af4278172d4c67a9d2130
+.. _aaf4cfe: https://github.com/starccato/starccato_lvk/commit/aaf4cfe6cdf85f2ef73c5a5e8ae3d3101e76a3c6
+.. _dabb9ef: https://github.com/starccato/starccato_lvk/commit/dabb9ef85d3f2dc89fff6b0c96763098e3c3633b
+.. _66e63a8: https://github.com/starccato/starccato_lvk/commit/66e63a843820848be13c1653b6b456dd78c9951c
+.. _0bdf931: https://github.com/starccato/starccato_lvk/commit/0bdf931059116f9520ff79c89989ca9e210cdad3
+.. _c0f0154: https://github.com/starccato/starccato_lvk/commit/c0f0154495b45bd884029f7b4a8c26bc9f55b7bc
+.. _1d6c00f: https://github.com/starccato/starccato_lvk/commit/1d6c00fef2812df1f2cdbfba5477e44d45942bad
+.. _96004b8: https://github.com/starccato/starccato_lvk/commit/96004b8901f9f75a4260b817627c71c312ad3acd
+.. _c3c6359: https://github.com/starccato/starccato_lvk/commit/c3c635970a5905e6f979e55b5b34e38b159535ac
+.. _d4da95d: https://github.com/starccato/starccato_lvk/commit/d4da95db06f8825bf22eac1382704c52fead0883
+.. _e8897db: https://github.com/starccato/starccato_lvk/commit/e8897dbec1368e0e9a58994bfbfd893cebd7cd27
+.. _e86679f: https://github.com/starccato/starccato_lvk/commit/e86679fd3ac4dee355752c664c6040634efe9e88
+.. _f6b96d3: https://github.com/starccato/starccato_lvk/commit/f6b96d35c09b5b3a5686a7a9b740fa02605ee73b
+.. _79134c1: https://github.com/starccato/starccato_lvk/commit/79134c1e65562943e1bb0a8dd83e8a8cb3d494d2
+.. _31f0ce0: https://github.com/starccato/starccato_lvk/commit/31f0ce015a2fa91d2875b58fffcc33ce21df211c
+.. _6974955: https://github.com/starccato/starccato_lvk/commit/6974955e110d1ed275909841fd45f24ed814cfa3

starccato_lvk-0.0.2/PKG-INFO

@@ -0,0 +1,41 @@
+Metadata-Version: 2.4
+Name: starccato_lvk
+Version: 0.0.2
+Summary: JAX-VAE stellar core collapse waveform tools for LVK data analysis
+Author-email: Starccato Team <avi.vajpeyi@gmail.com>
+Project-URL: Homepage, https://starccato.github.io/starccato_lvk/
+Project-URL: Bug Reports, https://giuthub.com/starccato/starccato_lvk/issues
+Project-URL: Source, https://github.com/starccato/starccato_lvk/
+Classifier: Development Status :: 3 - Alpha
+Classifier: Intended Audience :: Science/Research
+Classifier: License :: OSI Approved :: MIT License
+Classifier: Operating System :: OS Independent
+Classifier: Programming Language :: Python :: 3.8
+Requires-Python: >=3.9
+Description-Content-Type: text/markdown
+Requires-Dist: jax
+Requires-Dist: flax
+Requires-Dist: numpy
+Requires-Dist: matplotlib
+Requires-Dist: pandas
+Requires-Dist: h5py
+Requires-Dist: pillow
+Requires-Dist: natsort
+Requires-Dist: tqdm
+Requires-Dist: pycbc
+Requires-Dist: gwpy
+Requires-Dist: scipy
+Provides-Extra: dev
+Requires-Dist: pytest; extra == "dev"
+Requires-Dist: pytest-cov; extra == "dev"
+Requires-Dist: flake8>=5.0.4; extra == "dev"
+Requires-Dist: black>=22.12.0; extra == "dev"
+Requires-Dist: black[jupyter]>=22.12.0; extra == "dev"
+Requires-Dist: isort; extra == "dev"
+Requires-Dist: mypy; extra == "dev"
+Requires-Dist: jupyter-book; extra == "dev"
+Requires-Dist: pre-commit; extra == "dev"
+
+# starccato_lvk
+
+Tools to help work with LVK data

starccato_lvk-0.0.2/README.md

@@ -0,0 +1,3 @@
+# starccato_lvk
+
+Tools to help work with LVK data

starccato_lvk-0.0.2/pyproject.toml

@@ -0,0 +1,146 @@
+[build-system]
+requires = [
+    "setuptools>=64",
+    "setuptools-scm>=8.0",
+    "wheel"
+]
+build-backend = "setuptools.build_meta"
+
+[project]
+name = "starccato_lvk"
+dynamic = ["version"] # scm versioning (using tags)
+requires-python = ">=3.9"
+description = "JAX-VAE stellar core collapse waveform tools for LVK data analysis"
+readme = "README.md"
+authors = [
+    { name = "Starccato Team", email = "avi.vajpeyi@gmail.com" },
+]
+classifiers = [
+    "Development Status :: 3 - Alpha",
+    "Intended Audience :: Science/Research",
+    "License :: OSI Approved :: MIT License",
+    "Operating System :: OS Independent",
+    "Programming Language :: Python :: 3.8",
+]
+dependencies = [
+    "jax",
+    "flax",
+    "numpy",
+    "matplotlib",
+    "pandas",
+    "h5py",
+    "pillow",
+    "natsort",
+    "tqdm",
+    "pycbc",
+    "gwpy",
+    "scipy",
+]
+
+[project.optional-dependencies]
+dev = [
+    "pytest",
+    "pytest-cov",
+    "flake8>=5.0.4",
+    "black>=22.12.0",
+    "black[jupyter]>=22.12.0",
+    "isort",
+    "mypy",
+    "jupyter-book",
+    "pre-commit"
+]
+
+[tool.setuptools_scm]
+version_file = "src/starccato_lvk/_version.py"
+
+[tool.semantic_release]
+version_variable = "src/starccato_lvk/_version.py:__version__"
+version_source = "commit"
+commit_version_number = true
+commit_subject = "chore(release): {version}"
+commit_message = "chore(release): {version}"
+tag_format = "v{version}"
+no_local_version = true
+
+
+[tool.semantic_release.changelog]
+changelog_file = "CHANGELOG.rst"
+
+[project.urls]  # Optional
+"Homepage" = "https://starccato.github.io/starccato_lvk/"
+"Bug Reports" = "https://giuthub.com/starccato/starccato_lvk/issues"
+"Source" = "https://github.com/starccato/starccato_lvk/"
+
+
+[tool.setuptools]
+package-data = { "starccato_lvk" = [""] }
+
+[tool.setuptools.packages.find]
+where = ["src"]
+
+
+
+[tool.black]
+line-length = 79
+exclude = '''
+/(
+    \.eggs
+  | \.git
+  | \.hg
+  | \.mypy_cache
+  | \.tox
+  | \.venv
+  | _build
+  | buck-out
+  | build
+  | dist
+)/
+'''
+
+[tool.isort]
+profile = "black"
+line_length = 79
+
+
+[tool.pytest.ini_options]
+testpaths = ["tests"]
+
+[tool.coverage.run]
+branch = true
+source = [
+    "starccato_jax"
+]
+
+[tool.coverage.paths]
+source = [
+    "src/starccato_lvk",
+    "**/site-packages/starccato_lvk"
+]
+
+[tool.coverage.report]
+exclude_lines = [
+    "pragma: no cover",
+    "def __repr__",
+    "if self.debug",
+    "raise AssertionError",
+    "raise NotImplentedError",
+    "if 0:",
+    "if __name__ == .__main__.:"
+]
+
+ignore_errors = true
+
+[tool.coverage.html]
+title = "starccato_jax Coverage Test Report"
+
+
+[[tool.mypy.overrides]]
+module = "matplotlib.*,scipy.*,numba.*,bilby.*"
+ignore_missing_imports = true
+
+
+[project.scripts]
+get_analysis_data = "starccato_lvk.data_acquisition.main:cli_get_analysis_data"
+get_valid_times = "starccato_lvk.data_acquisition.main:cli_get_valid_times"
+collect_lvk_data = "starccato_lvk.data_acquisition.main:cli_collect_lvk_data"
+lvk_fetch = "starccato_lvk.data_acquisition.lvk_fetch:cli"

starccato_lvk-0.0.2/setup.cfg

@@ -0,0 +1,4 @@
+[egg_info]
+tag_build = 
+tag_date = 0
+

starccato_lvk-0.0.2/src/starccato_lvk/_version.py

@@ -0,0 +1,34 @@
+# file generated by setuptools-scm
+# don't change, don't track in version control
+
+__all__ = [
+    "__version__",
+    "__version_tuple__",
+    "version",
+    "version_tuple",
+    "__commit_id__",
+    "commit_id",
+]
+
+TYPE_CHECKING = False
+if TYPE_CHECKING:
+    from typing import Tuple
+    from typing import Union
+
+    VERSION_TUPLE = Tuple[Union[int, str], ...]
+    COMMIT_ID = Union[str, None]
+else:
+    VERSION_TUPLE = object
+    COMMIT_ID = object
+
+version: str
+__version__: str
+__version_tuple__: VERSION_TUPLE
+version_tuple: VERSION_TUPLE
+commit_id: COMMIT_ID
+__commit_id__: COMMIT_ID
+
+__version__ = version = '0.0.2'
+__version_tuple__ = version_tuple = (0, 0, 2)
+
+__commit_id__ = commit_id = 'ga2887d2ec'