spectraccess 0.1.0__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (66) hide show
  1. spectraccess-0.1.0/.github/workflows/ci.yml +27 -0
  2. spectraccess-0.1.0/.github/workflows/commit-messages.yml +53 -0
  3. spectraccess-0.1.0/.github/workflows/live-smoke.yml +91 -0
  4. spectraccess-0.1.0/.github/workflows/publish.yml +81 -0
  5. spectraccess-0.1.0/.gitignore +18 -0
  6. spectraccess-0.1.0/.release-please-manifest.json +1 -0
  7. spectraccess-0.1.0/CHANGELOG.md +52 -0
  8. spectraccess-0.1.0/CITATION.cff +9 -0
  9. spectraccess-0.1.0/CONTRIBUTING.md +32 -0
  10. spectraccess-0.1.0/LICENSE +203 -0
  11. spectraccess-0.1.0/OVERVIEW.md +164 -0
  12. spectraccess-0.1.0/PKG-INFO +208 -0
  13. spectraccess-0.1.0/pyproject.toml +90 -0
  14. spectraccess-0.1.0/release-please-config.json +15 -0
  15. spectraccess-0.1.0/scripts/live_smoke.py +353 -0
  16. spectraccess-0.1.0/src/spectraccess/__init__.py +11 -0
  17. spectraccess-0.1.0/src/spectraccess/connectors/__init__.py +2 -0
  18. spectraccess-0.1.0/src/spectraccess/connectors/aeronet/DATA_TERMS.md +24 -0
  19. spectraccess-0.1.0/src/spectraccess/connectors/aeronet/__init__.py +23 -0
  20. spectraccess-0.1.0/src/spectraccess/connectors/aeronet/connector.py +286 -0
  21. spectraccess-0.1.0/src/spectraccess/connectors/cams/DATA_TERMS.md +16 -0
  22. spectraccess-0.1.0/src/spectraccess/connectors/cams/__init__.py +43 -0
  23. spectraccess-0.1.0/src/spectraccess/connectors/cams/connector.py +847 -0
  24. spectraccess-0.1.0/src/spectraccess/connectors/cams/overlap.py +161 -0
  25. spectraccess-0.1.0/src/spectraccess/connectors/emit_earthaccess/DATA_TERMS.md +21 -0
  26. spectraccess-0.1.0/src/spectraccess/connectors/emit_earthaccess/__init__.py +21 -0
  27. spectraccess-0.1.0/src/spectraccess/connectors/emit_earthaccess/connector.py +636 -0
  28. spectraccess-0.1.0/src/spectraccess/connectors/gsics/DATA_TERMS.md +36 -0
  29. spectraccess-0.1.0/src/spectraccess/connectors/gsics/__init__.py +3 -0
  30. spectraccess-0.1.0/src/spectraccess/connectors/gsics/connector.py +464 -0
  31. spectraccess-0.1.0/src/spectraccess/connectors/landsat_eodag/DATA_TERMS.md +14 -0
  32. spectraccess-0.1.0/src/spectraccess/connectors/landsat_eodag/__init__.py +22 -0
  33. spectraccess-0.1.0/src/spectraccess/connectors/landsat_eodag/connector.py +596 -0
  34. spectraccess-0.1.0/src/spectraccess/connectors/modis_viirs_cal/DATA_TERMS.md +10 -0
  35. spectraccess-0.1.0/src/spectraccess/connectors/modis_viirs_cal/__init__.py +4 -0
  36. spectraccess-0.1.0/src/spectraccess/connectors/modis_viirs_cal/connector.py +105 -0
  37. spectraccess-0.1.0/src/spectraccess/connectors/radcalnet/DATA_TERMS.md +56 -0
  38. spectraccess-0.1.0/src/spectraccess/connectors/radcalnet/__init__.py +16 -0
  39. spectraccess-0.1.0/src/spectraccess/connectors/radcalnet/connector.py +760 -0
  40. spectraccess-0.1.0/src/spectraccess/connectors/sentinel2_cdse/DATA_TERMS.md +20 -0
  41. spectraccess-0.1.0/src/spectraccess/connectors/sentinel2_cdse/__init__.py +23 -0
  42. spectraccess-0.1.0/src/spectraccess/connectors/sentinel2_cdse/connector.py +638 -0
  43. spectraccess-0.1.0/src/spectraccess/connectors/thredds.py +197 -0
  44. spectraccess-0.1.0/src/spectraccess/core/__init__.py +24 -0
  45. spectraccess-0.1.0/src/spectraccess/core/assumptions.py +46 -0
  46. spectraccess-0.1.0/src/spectraccess/core/connector.py +100 -0
  47. spectraccess-0.1.0/src/spectraccess/core/fetch.py +69 -0
  48. spectraccess-0.1.0/src/spectraccess/core/schema.py +273 -0
  49. spectraccess-0.1.0/src/spectraccess/core/session.py +59 -0
  50. spectraccess-0.1.0/src/spectraccess/py.typed +0 -0
  51. spectraccess-0.1.0/tests/fixtures/README.md +56 -0
  52. spectraccess-0.1.0/tests/fixtures/aeronet/Granada_2024_06_15_L2.0.csv +10 -0
  53. spectraccess-0.1.0/tests/fixtures/aeronet/Ispra_2024_07_15_L2.0.csv +10 -0
  54. spectraccess-0.1.0/tests/fixtures/gsics_coefficients.csv +4 -0
  55. spectraccess-0.1.0/tests/fixtures/gsics_msg4_seviri_metopb_iasi_nrtc_20260704.nc +0 -0
  56. spectraccess-0.1.0/tests/fixtures/radcalnet/GSCN01_2025_334_v04.05.output +46 -0
  57. spectraccess-0.1.0/tests/fixtures/sentinel2_cdse/S2B_T31UFT_20240501_feature.json +47 -0
  58. spectraccess-0.1.0/tests/fixtures/viirs_factors.csv +4 -0
  59. spectraccess-0.1.0/tests/test_cams.py +682 -0
  60. spectraccess-0.1.0/tests/test_connectors.py +855 -0
  61. spectraccess-0.1.0/tests/test_core.py +70 -0
  62. spectraccess-0.1.0/tests/test_emit_earthaccess.py +350 -0
  63. spectraccess-0.1.0/tests/test_landsat_eodag.py +254 -0
  64. spectraccess-0.1.0/tests/test_schema.py +209 -0
  65. spectraccess-0.1.0/tests/test_sentinel2_cdse.py +338 -0
  66. spectraccess-0.1.0/tests/test_thredds.py +140 -0
@@ -0,0 +1,27 @@
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+ name: CI
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+
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+ on:
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+ push:
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+ pull_request:
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+
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+ permissions:
8
+ contents: read
9
+
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+ jobs:
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+ tests:
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+ runs-on: ubuntu-latest
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+ strategy:
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+ fail-fast: false
15
+ matrix:
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+ # Every version requires-python and the classifiers promise.
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+ python-version: ["3.10", "3.11", "3.12", "3.13"]
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+ steps:
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+ - uses: actions/checkout@v4
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+ - uses: actions/setup-python@v5
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+ with:
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+ python-version: ${{ matrix.python-version }}
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+ - name: Install
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+ run: python -m pip install -e ".[test]"
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+ - name: Run fixture tests
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+ run: pytest
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+
@@ -0,0 +1,53 @@
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+ name: Commit messages
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+
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+ # release-please builds versions and release notes from commit subjects, so
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+ # every non-merge commit must follow Conventional Commits (see CONTRIBUTING.md).
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+
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+ on:
7
+ push:
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+ pull_request:
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+
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+ permissions:
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+ contents: read
12
+
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+ jobs:
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+ conventional-commits:
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+ runs-on: ubuntu-latest
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+ steps:
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+ - uses: actions/checkout@v4
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+ with:
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+ fetch-depth: 0
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+ - name: Check commit subjects
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+ env:
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+ EVENT: ${{ github.event_name }}
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+ PUSH_BEFORE: ${{ github.event.before }}
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+ PUSH_AFTER: ${{ github.event.after }}
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+ PR_BASE: ${{ github.event.pull_request.base.sha }}
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+ PR_HEAD: ${{ github.event.pull_request.head.sha }}
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+ run: |
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+ if [ "$EVENT" = "pull_request" ]; then
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+ range="$PR_BASE..$PR_HEAD"
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+ elif [ -z "${PUSH_BEFORE//0/}" ]; then
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+ echo "New branch or tag push: no previous head to compare against; skipping."
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+ exit 0
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+ elif ! git cat-file -e "$PUSH_BEFORE^{commit}" 2>/dev/null; then
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+ echo "Previous head $PUSH_BEFORE is not in history (force push); skipping."
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+ exit 0
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+ else
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+ range="$PUSH_BEFORE..$PUSH_AFTER"
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+ fi
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+ pattern='^(feat|fix|docs|chore|ci|build|refactor|test|perf|style|revert)(\([A-Za-z0-9._/-]+\))?!?: [^ ].*$'
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+ bad=0
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+ while IFS= read -r line; do
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+ sha="${line%% *}"
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+ subject="${line#* }"
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+ if ! printf '%s\n' "$subject" | grep -Eq "$pattern"; then
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+ echo "::error::${sha:0:12} does not follow Conventional Commits: $subject"
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+ bad=1
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+ fi
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+ done < <(git log --no-merges --format='%H %s' "$range")
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+ if [ "$bad" -ne 0 ]; then
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+ echo "Expected 'type(scope)?!?: subject' with type one of feat, fix, docs, chore, ci, build, refactor, test, perf, style, revert." >&2
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+ exit 1
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+ fi
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+ echo "All commit subjects in $range follow Conventional Commits."
@@ -0,0 +1,91 @@
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+ name: Live connector smoke tests
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+
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+ on:
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+ schedule:
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+ - cron: "17 3 * * 1"
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+ workflow_dispatch:
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+
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+ permissions:
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+ contents: read
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+ issues: write
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+
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+ jobs:
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+ smoke:
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+ runs-on: ubuntu-latest
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+ strategy:
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+ fail-fast: false
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+ matrix:
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+ connector:
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+ [gsics, modis_viirs_cal, radcalnet, sentinel2_cdse, aeronet, cams, emit_earthaccess, landsat_eodag]
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+ steps:
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+ - uses: actions/checkout@v4
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+ - uses: actions/setup-python@v5
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+ with:
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+ python-version: "3.12"
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+ - name: Install
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+ # The test extra carries every connector's maintained client
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+ # (cdsetool, cdsapi, earthaccess on 3.12+, eodag[usgs]).
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+ run: python -m pip install -e ".[test]"
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+ - name: Run live smoke
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+ id: smoke
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+ continue-on-error: true
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+ # GSICS catalog vars are optional overrides: the connector ships live
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+ # defaults for EUMETSAT + CMA, so these only need to be set to point
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+ # at a different catalog URL (e.g. once NOAA STAR is reachable again).
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+ # VIIRS has no live default yet, so its var remains required for that
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+ # smoke to do anything.
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+ env:
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+ SPECTRACCESS_GSICS_EUMETSAT_CATALOG_URL: ${{ vars.SPECTRACCESS_GSICS_EUMETSAT_CATALOG_URL }}
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+ SPECTRACCESS_GSICS_NOAA_STAR_CATALOG_URL: ${{ vars.SPECTRACCESS_GSICS_NOAA_STAR_CATALOG_URL }}
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+ SPECTRACCESS_GSICS_CMA_CATALOG_URL: ${{ vars.SPECTRACCESS_GSICS_CMA_CATALOG_URL }}
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+ SPECTRACCESS_VIIRS_CATALOG_URL: ${{ vars.SPECTRACCESS_VIIRS_CATALOG_URL }}
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+ # BYO-credentials: the radcalnet smoke prints SKIP and exits 0 until
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+ # these repo secrets are configured (a free RadCalNet portal account).
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+ RADCALNET_USERNAME: ${{ secrets.RADCALNET_USERNAME }}
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+ RADCALNET_PASSWORD: ${{ secrets.RADCALNET_PASSWORD }}
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+ # BYO-credentials: the landsat_eodag smoke prints SKIP and exits 0
47
+ # until these repo secrets are set (USGS EarthExplorer username and
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+ # M2M application token; USGS needs them even for search). Names are
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+ # EODAG's own USGS credential variables, read by the connector.
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+ EODAG__USGS__API__CREDENTIALS__USERNAME: ${{ secrets.EODAG__USGS__API__CREDENTIALS__USERNAME }}
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+ EODAG__USGS__API__CREDENTIALS__PASSWORD: ${{ secrets.EODAG__USGS__API__CREDENTIALS__PASSWORD }}
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+ # BYO-credentials: the cams smoke always checks the public JASMIN
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+ # mirror; its ADS half prints SKIP until this repo secret is set
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+ # (free ADS account personal access token).
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+ ADS_TOKEN: ${{ secrets.ADS_TOKEN }}
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+ run: python scripts/live_smoke.py "${{ matrix.connector }}"
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+ - name: Open or update upstream-back issue
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+ # The modis_viirs_cal smoke skips while NOAA STAR THREDDS is down but
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+ # probes it every week; when it answers, say so in an issue. Never
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+ # fails the job.
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+ if: matrix.connector == 'modis_viirs_cal' && steps.smoke.outputs.star_thredds == 'reachable'
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+ continue-on-error: true
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+ env:
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+ GH_TOKEN: ${{ github.token }}
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+ run: |
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+ title="upstream-back: NOAA STAR THREDDS reachable"
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+ body="Weekly live smoke found https://www.star.nesdis.noaa.gov/thredds/gsics/catalog.xml serving a THREDDS catalog again in ${GITHUB_SERVER_URL}/${GITHUB_REPOSITORY}/actions/runs/${GITHUB_RUN_ID}. Verify the NOAA STAR GSICS and VIIRS F-factor catalog URLs, then configure SPECTRACCESS_VIIRS_CATALOG_URL / the GSICS NOAA STAR default."
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+ gh label create upstream-back --description "An upstream portal that was down answers again" --color 0E8A16 --force
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+ existing="$(gh issue list --state open --label upstream-back --search "$title in:title" --json number --jq '.[0].number')"
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+ if [ -n "$existing" ]; then
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+ gh issue comment "$existing" --body "$body"
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+ else
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+ gh issue create --title "$title" --label upstream-back --body "$body"
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+ fi
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+ - name: Open or update connector-broken issue
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+ if: steps.smoke.outcome == 'failure'
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+ env:
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+ GH_TOKEN: ${{ github.token }}
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+ CONNECTOR: ${{ matrix.connector }}
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+ run: |
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+ title="connector-broken: ${CONNECTOR}"
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+ body="Weekly live smoke failed for ${CONNECTOR} in ${GITHUB_SERVER_URL}/${GITHUB_REPOSITORY}/actions/runs/${GITHUB_RUN_ID}."
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+ # Fresh repos have no such label; --force makes this idempotent.
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+ gh label create connector-broken --description "A connector's live portal smoke test is failing" --color B60205 --force
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+ existing="$(gh issue list --state open --label connector-broken --search "$title in:title" --json number --jq '.[0].number')"
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+ if [ -n "$existing" ]; then
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+ gh issue comment "$existing" --body "$body"
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+ else
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+ gh issue create --title "$title" --label connector-broken --body "$body"
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+ fi
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+
@@ -0,0 +1,81 @@
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+ name: Release and publish to PyPI
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+
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+ # One workflow on purpose: a GitHub Release created with GITHUB_TOKEN does not
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+ # trigger `release: published` in other workflows, so release-please and the
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+ # PyPI upload must run in the same run. Keep this filename and the `pypi`
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+ # environment: the PyPI trusted-publisher registration names both.
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+
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+ on:
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+ push:
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+ branches: [main]
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+
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+ permissions:
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+ contents: read
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+
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+ jobs:
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+ release-please:
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+ runs-on: ubuntu-latest
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+ permissions:
19
+ contents: write
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+ pull-requests: write
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+ outputs:
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+ release_created: ${{ steps.release.outputs.release_created }}
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+ tag_name: ${{ steps.release.outputs.tag_name }}
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+ steps:
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+ # Opens or updates the release PR from Conventional Commits; when that PR
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+ # is merged, tags v<version> and creates the GitHub Release.
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+ - uses: googleapis/release-please-action@v4
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+ id: release
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+ with:
30
+ config-file: release-please-config.json
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+ manifest-file: .release-please-manifest.json
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+
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+ build:
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+ needs: release-please
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+ if: ${{ needs.release-please.outputs.release_created == 'true' }}
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+ runs-on: ubuntu-latest
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+ steps:
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+ - uses: actions/checkout@v4
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+ with:
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+ ref: ${{ needs.release-please.outputs.tag_name }}
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+ - uses: actions/setup-python@v5
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+ with:
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+ python-version: "3.12"
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+ - name: Release tag matches the package version
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+ env:
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+ TAG: ${{ needs.release-please.outputs.tag_name }}
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+ run: |
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+ version=$(python -c "import tomllib; print(tomllib.load(open('pyproject.toml', 'rb'))['project']['version'])")
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+ if [ "$TAG" != "v$version" ]; then
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+ echo "Release tag $TAG does not match pyproject version v$version" >&2
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+ exit 1
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+ fi
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+ - name: Install build backend
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+ run: python -m pip install build
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+ - name: Build sdist and wheel
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+ run: python -m build
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+ - uses: actions/upload-artifact@v4
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+ with:
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+ name: dist
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+ path: dist/
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+
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+ publish:
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+ needs: build
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+ runs-on: ubuntu-latest
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+ environment:
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+ name: pypi
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+ url: https://pypi.org/p/spectraccess
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+ permissions:
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+ # Required for PyPI trusted publishing (OIDC). No API token/secret
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+ # is stored in this repo: PyPI exchanges this token for a short-lived
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+ # upload credential based on the publisher registered for this project
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+ # (owner, repository, workflow filename publish.yml, and environment
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+ # name pypi must match exactly).
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+ id-token: write
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+ steps:
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+ - uses: actions/download-artifact@v4
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+ with:
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+ name: dist
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+ path: dist/
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+ - name: Publish to PyPI
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+ uses: pypa/gh-action-pypi-publish@release/v1
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+ __pycache__/
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+ *.py[cod]
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+ *.egg-info/
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+ .pytest_cache/
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+ pytest-cache-files-*/
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+ .mypy_cache/
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+ .ruff_cache/
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+ .coverage
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+ htmlcov/
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+ build/
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+ dist/
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+ .venv/
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+ .venv_verify/
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+ venv/
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+ env/
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+ .env
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+ .spectraccess_cache/
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+ .tmp/
@@ -0,0 +1 @@
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+ {".":"0.1.0"}
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+ # Changelog
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+
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+ All notable changes to spectrAccess are documented in this file.
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+
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+ Release entries are generated by release-please from Conventional Commit
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+ messages (see CONTRIBUTING.md), and this project adheres to
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+ [Semantic Versioning](https://semver.org/).
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+
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+ ## 0.1.0 (2026-09-26)
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+
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+
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+ ### Features
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+
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+ * **cams:** read cache dir and fallback mirror from SPECTRACCESS_* env vars ([75abb85](https://github.com/SpectraWorksOSS/SpectrAccess/commit/75abb8574a0288cda0b0af7808995617876602b2))
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+
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+
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+ ### Documentation
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+
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+ * rename front page to OVERVIEW.md ([9f81522](https://github.com/SpectraWorksOSS/SpectrAccess/commit/9f81522a20a0ec19cfd4d2933cbd445d8a9d7240))
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+ * state live-verification honestly; release 0.1.0 via one-shot footer ([00b87b9](https://github.com/SpectraWorksOSS/SpectrAccess/commit/00b87b9029a3d06e3d20f72a9cd28030bd993120))
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+
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+ ### 0.1.0 scope: initial public release
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+
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+ #### Added
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+
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+ - Core `Connector` interface (`discover()`, `fetch()`, `parse()`, `run()`) for
27
+ source-specific spectral reference data adapters.
28
+ - Canonical long/tidy schema v1.0 (`spectraccess.core.schema`): one row per
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+ quantity value with an uncertainty record whose status (`provided`,
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+ `derived`, `prior`, `unknown`) is never null, even when the value is.
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+ - GSICS connector for GPPA inter-calibration products (EUMETSAT and CMA
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+ catalogs; NOAA STAR as an optional override).
33
+ - VIIRS calibration connector shape (NOAA STAR F-factor catalog pending
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+ verification; MODIS planned).
35
+ - RadCalNet connector on the official JSON API with BYO portal credentials,
36
+ including per-wavelength uncertainties mapped to `provided` / `prior`;
37
+ `.output` files parse to `toa_reflectance`, `.input` files to
38
+ `surface_reflectance`.
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+ - NASA AERONET v3 connector for the public web service, with a 550 nm AOD
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+ interpolation helper.
41
+ - Sentinel-2 L1C discovery and download via CDSETool (`spectraccess[cdse]`).
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+ - CAMS EAC4 access via the JASMIN mirror and ECMWF's ADS API, plus explicit
43
+ CAMS forecast products (`spectraccess[cams]`).
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+ - NASA EMIT L1B/L2A discovery and download via earthaccess
45
+ (`spectraccess[emit]`, requires Python 3.12 or newer).
46
+ - Landsat 8/9 Collection-2 L1TP discovery and download via EODAG/USGS
47
+ (`spectraccess[landsat]`); area searches skip non-L1TP products the
48
+ provider returns alongside.
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+ - Weekly live-smoke workflow that opens or updates a `connector-broken` issue
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+ when a portal stops answering as expected.
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+ - Fixture-based CI test suite on Python 3.10 to 3.13.
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+ - `py.typed` marker: the public API ships inline type hints.
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+ cff-version: 1.2.0
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+ message: "If you use spectrAccess, please cite it as below."
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+ title: "spectrAccess"
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+ authors:
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+ - name: "SpectraWorks B.V."
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+ version: "0.1.0" # x-release-please-version
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+ license: "Apache-2.0"
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+ repository-code: "https://github.com/SpectraWorksOSS/SpectrAccess"
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+
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+ # Contributing
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+
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+ Community contributions are welcome, especially new connectors for spectral reference data portals that lack maintained Python access layers.
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+
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+ ## Add a Connector
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+
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+ 1. Create a package under `src/spectraccess/connectors/<source_name>/`.
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+ 2. Implement the `spectraccess.core.connector.Connector` interface:
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+ `discover()` lists available targets, `fetch()` retrieves raw bytes or files,
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+ and `parse()` converts raw content into a tidy `pandas.DataFrame` or
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+ `xarray.Dataset`.
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+ 3. Add a `DATA_TERMS.md` file in the connector package describing the source
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+ portal's data license or terms of use. The Apache-2.0 project license covers
14
+ code only, not source data.
15
+ 4. Add fixture-based tests under `tests/` using small recorded files checked
16
+ into `tests/fixtures/`. Default pytest runs must not make live network calls.
17
+ 5. Add or update live-smoke coverage in `.github/workflows/live-smoke.yml` for
18
+ public endpoints that should be monitored weekly.
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+
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+ Do not hardcode credentials or redistribute third-party data through this
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+ project. Connectors should use the BYO-credentials helpers in
22
+ `spectraccess.core.session` when authentication is required.
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+
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+
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+ ## Commit Messages
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+
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+ Commit subjects follow [Conventional Commits](https://www.conventionalcommits.org/):
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