spacr 0.2.31__tar.gz → 0.2.32__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (80) hide show
  1. {spacr-0.2.31/spacr.egg-info → spacr-0.2.32}/PKG-INFO +1 -1
  2. {spacr-0.2.31 → spacr-0.2.32}/setup.py +1 -1
  3. {spacr-0.2.31 → spacr-0.2.32}/spacr/gui_elements.py +6 -6
  4. {spacr-0.2.31 → spacr-0.2.32/spacr.egg-info}/PKG-INFO +1 -1
  5. {spacr-0.2.31 → spacr-0.2.32}/LICENSE +0 -0
  6. {spacr-0.2.31 → spacr-0.2.32}/MANIFEST.in +0 -0
  7. {spacr-0.2.31 → spacr-0.2.32}/README.rst +0 -0
  8. {spacr-0.2.31 → spacr-0.2.32}/setup.cfg +0 -0
  9. {spacr-0.2.31 → spacr-0.2.32}/spacr/__init__.py +0 -0
  10. {spacr-0.2.31 → spacr-0.2.32}/spacr/__main__.py +0 -0
  11. {spacr-0.2.31 → spacr-0.2.32}/spacr/app_annotate.py +0 -0
  12. {spacr-0.2.31 → spacr-0.2.32}/spacr/app_classify.py +0 -0
  13. {spacr-0.2.31 → spacr-0.2.32}/spacr/app_make_masks.py +0 -0
  14. {spacr-0.2.31 → spacr-0.2.32}/spacr/app_mask.py +0 -0
  15. {spacr-0.2.31 → spacr-0.2.32}/spacr/app_measure.py +0 -0
  16. {spacr-0.2.31 → spacr-0.2.32}/spacr/app_sequencing.py +0 -0
  17. {spacr-0.2.31 → spacr-0.2.32}/spacr/app_umap.py +0 -0
  18. {spacr-0.2.31 → spacr-0.2.32}/spacr/chris.py +0 -0
  19. {spacr-0.2.31 → spacr-0.2.32}/spacr/core.py +0 -0
  20. {spacr-0.2.31 → spacr-0.2.32}/spacr/deep_spacr.py +0 -0
  21. {spacr-0.2.31 → spacr-0.2.32}/spacr/graph_learning.py +0 -0
  22. {spacr-0.2.31 → spacr-0.2.32}/spacr/gui.py +0 -0
  23. {spacr-0.2.31 → spacr-0.2.32}/spacr/gui_core.py +0 -0
  24. {spacr-0.2.31 → spacr-0.2.32}/spacr/gui_utils.py +0 -0
  25. {spacr-0.2.31 → spacr-0.2.32}/spacr/io.py +0 -0
  26. {spacr-0.2.31 → spacr-0.2.32}/spacr/logger.py +0 -0
  27. {spacr-0.2.31 → spacr-0.2.32}/spacr/measure.py +0 -0
  28. {spacr-0.2.31 → spacr-0.2.32}/spacr/plot.py +0 -0
  29. {spacr-0.2.31 → spacr-0.2.32}/spacr/resources/icons/abort.png +0 -0
  30. {spacr-0.2.31 → spacr-0.2.32}/spacr/resources/icons/annotate.png +0 -0
  31. {spacr-0.2.31 → spacr-0.2.32}/spacr/resources/icons/cellpose_all.png +0 -0
  32. {spacr-0.2.31 → spacr-0.2.32}/spacr/resources/icons/cellpose_masks.png +0 -0
  33. {spacr-0.2.31 → spacr-0.2.32}/spacr/resources/icons/classify.png +0 -0
  34. {spacr-0.2.31 → spacr-0.2.32}/spacr/resources/icons/default.png +0 -0
  35. {spacr-0.2.31 → spacr-0.2.32}/spacr/resources/icons/download.png +0 -0
  36. {spacr-0.2.31 → spacr-0.2.32}/spacr/resources/icons/logo_spacr.png +0 -0
  37. {spacr-0.2.31 → spacr-0.2.32}/spacr/resources/icons/make_masks.png +0 -0
  38. {spacr-0.2.31 → spacr-0.2.32}/spacr/resources/icons/map_barcodes.png +0 -0
  39. {spacr-0.2.31 → spacr-0.2.32}/spacr/resources/icons/mask.png +0 -0
  40. {spacr-0.2.31 → spacr-0.2.32}/spacr/resources/icons/measure.png +0 -0
  41. {spacr-0.2.31 → spacr-0.2.32}/spacr/resources/icons/ml_analyze.png +0 -0
  42. {spacr-0.2.31 → spacr-0.2.32}/spacr/resources/icons/recruitment.png +0 -0
  43. {spacr-0.2.31 → spacr-0.2.32}/spacr/resources/icons/regression.png +0 -0
  44. {spacr-0.2.31 → spacr-0.2.32}/spacr/resources/icons/run.png +0 -0
  45. {spacr-0.2.31 → spacr-0.2.32}/spacr/resources/icons/sequencing.png +0 -0
  46. {spacr-0.2.31 → spacr-0.2.32}/spacr/resources/icons/settings.png +0 -0
  47. {spacr-0.2.31 → spacr-0.2.32}/spacr/resources/icons/spacr_logo_rotation.gif +0 -0
  48. {spacr-0.2.31 → spacr-0.2.32}/spacr/resources/icons/train_cellpose.png +0 -0
  49. {spacr-0.2.31 → spacr-0.2.32}/spacr/resources/icons/umap.png +0 -0
  50. {spacr-0.2.31 → spacr-0.2.32}/spacr/resources/models/cp/toxo_plaque_cyto_e25000_X1120_Y1120.CP_model +0 -0
  51. {spacr-0.2.31 → spacr-0.2.32}/spacr/resources/models/cp/toxo_plaque_cyto_e25000_X1120_Y1120.CP_model_settings.csv +0 -0
  52. {spacr-0.2.31 → spacr-0.2.32}/spacr/resources/models/cp/toxo_pv_lumen.CP_model +0 -0
  53. {spacr-0.2.31 → spacr-0.2.32}/spacr/sequencing.py +0 -0
  54. {spacr-0.2.31 → spacr-0.2.32}/spacr/settings.py +0 -0
  55. {spacr-0.2.31 → spacr-0.2.32}/spacr/sim.py +0 -0
  56. {spacr-0.2.31 → spacr-0.2.32}/spacr/sim_app.py +0 -0
  57. {spacr-0.2.31 → spacr-0.2.32}/spacr/timelapse.py +0 -0
  58. {spacr-0.2.31 → spacr-0.2.32}/spacr/utils.py +0 -0
  59. {spacr-0.2.31 → spacr-0.2.32}/spacr/version.py +0 -0
  60. {spacr-0.2.31 → spacr-0.2.32}/spacr.egg-info/SOURCES.txt +0 -0
  61. {spacr-0.2.31 → spacr-0.2.32}/spacr.egg-info/dependency_links.txt +0 -0
  62. {spacr-0.2.31 → spacr-0.2.32}/spacr.egg-info/entry_points.txt +0 -0
  63. {spacr-0.2.31 → spacr-0.2.32}/spacr.egg-info/requires.txt +0 -0
  64. {spacr-0.2.31 → spacr-0.2.32}/spacr.egg-info/top_level.txt +0 -0
  65. {spacr-0.2.31 → spacr-0.2.32}/tests/test_annotate_app.py +0 -0
  66. {spacr-0.2.31 → spacr-0.2.32}/tests/test_core.py +0 -0
  67. {spacr-0.2.31 → spacr-0.2.32}/tests/test_gui_classify_app.py +0 -0
  68. {spacr-0.2.31 → spacr-0.2.32}/tests/test_gui_mask_app.py +0 -0
  69. {spacr-0.2.31 → spacr-0.2.32}/tests/test_gui_measure_app.py +0 -0
  70. {spacr-0.2.31 → spacr-0.2.32}/tests/test_gui_sim_app.py +0 -0
  71. {spacr-0.2.31 → spacr-0.2.32}/tests/test_gui_utils.py +0 -0
  72. {spacr-0.2.31 → spacr-0.2.32}/tests/test_io.py +0 -0
  73. {spacr-0.2.31 → spacr-0.2.32}/tests/test_mask_app.py +0 -0
  74. {spacr-0.2.31 → spacr-0.2.32}/tests/test_measure.py +0 -0
  75. {spacr-0.2.31 → spacr-0.2.32}/tests/test_plot.py +0 -0
  76. {spacr-0.2.31 → spacr-0.2.32}/tests/test_sim.py +0 -0
  77. {spacr-0.2.31 → spacr-0.2.32}/tests/test_timelapse.py +0 -0
  78. {spacr-0.2.31 → spacr-0.2.32}/tests/test_train.py +0 -0
  79. {spacr-0.2.31 → spacr-0.2.32}/tests/test_umap.py +0 -0
  80. {spacr-0.2.31 → spacr-0.2.32}/tests/test_utils.py +0 -0
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: spacr
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- Version: 0.2.31
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+ Version: 0.2.32
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  Summary: Spatial phenotype analysis of crisp screens (SpaCr)
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  Home-page: https://github.com/EinarOlafsson/spacr
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  Author: Einar Birnir Olafsson
@@ -50,7 +50,7 @@ dependencies = [
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  setup(
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  name="spacr",
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- version="0.2.31",
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+ version="0.2.32",
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  author="Einar Birnir Olafsson",
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  author_email="olafsson@med.umich.com",
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  description="Spatial phenotype analysis of crisp screens (SpaCr)",
@@ -1591,14 +1591,14 @@ class AnnotateApp:
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  self.db_path = db_path
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  self.src = src
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  self.index = 0
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-
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+
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  if isinstance(image_size, list):
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  self.image_size = (int(image_size[0]), int(image_size[0]))
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  elif isinstance(image_size, int):
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  self.image_size = (image_size, image_size)
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  else:
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  raise ValueError("Invalid image size")
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-
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+
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  self.annotation_column = annotation_column
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  self.image_type = image_type
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  self.channels = channels
@@ -1613,8 +1613,6 @@ class AnnotateApp:
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  self.measurement = measurement
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  self.threshold = threshold
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- print('self.image_size', self.image_size)
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-
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  style_out = set_dark_style(ttk.Style())
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  self.root.configure(bg=style_out['inactive_color'])
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@@ -1662,8 +1660,10 @@ class AnnotateApp:
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  self.root.grid_columnconfigure(0, weight=1)
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  self.root.grid_columnconfigure(1, weight=1)
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- self.grid_frame.grid_rowconfigure(0, weight=1)
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- self.grid_frame.grid_columnconfigure(0, weight=1)
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+ for row in range(self.grid_rows):
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+ self.grid_frame.grid_rowconfigure(row, weight=1)
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+ for col in range(self.grid_cols):
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+ self.grid_frame.grid_columnconfigure(col, weight=1)
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  def calculate_grid_dimensions(self):
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  window_width = self.root.winfo_width()
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: spacr
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- Version: 0.2.31
3
+ Version: 0.2.32
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4
  Summary: Spatial phenotype analysis of crisp screens (SpaCr)
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  Home-page: https://github.com/EinarOlafsson/spacr
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  Author: Einar Birnir Olafsson
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