sopsim 0.2.0__tar.gz → 0.2.2__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (37) hide show
  1. {sopsim-0.2.0/sopsim.egg-info → sopsim-0.2.2}/PKG-INFO +5 -2
  2. {sopsim-0.2.0 → sopsim-0.2.2}/README.md +4 -1
  3. {sopsim-0.2.0 → sopsim-0.2.2}/pyproject.toml +1 -1
  4. {sopsim-0.2.0 → sopsim-0.2.2}/sopsim/cli.py +2 -3
  5. {sopsim-0.2.0 → sopsim-0.2.2/sopsim.egg-info}/PKG-INFO +5 -2
  6. {sopsim-0.2.0 → sopsim-0.2.2}/MANIFEST.in +0 -0
  7. {sopsim-0.2.0 → sopsim-0.2.2}/setup.cfg +0 -0
  8. {sopsim-0.2.0 → sopsim-0.2.2}/sopsim/__init__.py +0 -0
  9. {sopsim-0.2.0 → sopsim-0.2.2}/sopsim/__main__.py +0 -0
  10. {sopsim-0.2.0 → sopsim-0.2.2}/sopsim/artifacts.py +0 -0
  11. {sopsim-0.2.0 → sopsim-0.2.2}/sopsim/config.py +0 -0
  12. {sopsim-0.2.0 → sopsim-0.2.2}/sopsim/core.py +0 -0
  13. {sopsim-0.2.0 → sopsim-0.2.2}/sopsim/delta_in.py +0 -0
  14. {sopsim-0.2.0 → sopsim-0.2.2}/sopsim/filop_lent.py +0 -0
  15. {sopsim-0.2.0 → sopsim-0.2.2}/sopsim/filop_vectors.py +0 -0
  16. {sopsim-0.2.0 → sopsim-0.2.2}/sopsim/mat_files/Ang.mat +0 -0
  17. {sopsim-0.2.0 → sopsim-0.2.2}/sopsim/mat_files/Delta.mat +0 -0
  18. {sopsim-0.2.0 → sopsim-0.2.2}/sopsim/mat_files/F2.mat +0 -0
  19. {sopsim-0.2.0 → sopsim-0.2.2}/sopsim/mat_files/Notch.mat +0 -0
  20. {sopsim-0.2.0 → sopsim-0.2.2}/sopsim/mat_files/kappa.mat +0 -0
  21. {sopsim-0.2.0 → sopsim-0.2.2}/sopsim/reference_data.py +0 -0
  22. {sopsim-0.2.0 → sopsim-0.2.2}/sopsim/run_sopsim.py +0 -0
  23. {sopsim-0.2.0 → sopsim-0.2.2}/sopsim/server.py +0 -0
  24. {sopsim-0.2.0 → sopsim-0.2.2}/sopsim/two_d_geom.py +0 -0
  25. {sopsim-0.2.0 → sopsim-0.2.2}/sopsim/web_dist/__init__.py +0 -0
  26. {sopsim-0.2.0 → sopsim-0.2.2}/sopsim/web_dist/assets/index-Bg57AWq2.js +0 -0
  27. {sopsim-0.2.0 → sopsim-0.2.2}/sopsim/web_dist/assets/index-Bop8xgS8.css +0 -0
  28. {sopsim-0.2.0 → sopsim-0.2.2}/sopsim/web_dist/index.html +0 -0
  29. {sopsim-0.2.0 → sopsim-0.2.2}/sopsim.egg-info/SOURCES.txt +0 -0
  30. {sopsim-0.2.0 → sopsim-0.2.2}/sopsim.egg-info/dependency_links.txt +0 -0
  31. {sopsim-0.2.0 → sopsim-0.2.2}/sopsim.egg-info/entry_points.txt +0 -0
  32. {sopsim-0.2.0 → sopsim-0.2.2}/sopsim.egg-info/requires.txt +0 -0
  33. {sopsim-0.2.0 → sopsim-0.2.2}/sopsim.egg-info/top_level.txt +0 -0
  34. {sopsim-0.2.0 → sopsim-0.2.2}/tests/test_api_types.py +0 -0
  35. {sopsim-0.2.0 → sopsim-0.2.2}/tests/test_cli.py +0 -0
  36. {sopsim-0.2.0 → sopsim-0.2.2}/tests/test_config.py +0 -0
  37. {sopsim-0.2.0 → sopsim-0.2.2}/tests/test_server.py +0 -0
{sopsim-0.2.0/sopsim.egg-info → sopsim-0.2.2}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: sopsim
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- Version: 0.2.0
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+ Version: 0.2.2
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  Summary: SOPSim simulation library
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  Author: Olaolu Olugbenle, Dr. William Annan
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  Requires-Python: >=3.9
@@ -35,7 +35,7 @@ The official SOPSim website is available at (*link coming soon*).
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  Inside your command line, type:
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  ```bash
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- pip install -i https://test.pypi.org/simple/ sopsim==0.1.6
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+ pip install sopsim
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  ```
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  to install the package.
@@ -128,3 +128,6 @@ Important:
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  - For other `Nc` values, the simulation uses fresh random draws each run -->
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  - *`Nc = 4` implies a 4x4 tissue
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  - `Nc>=10` can take many hours to run, so start smaller when testing
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+
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+ ## Bug fixes:
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+ - 0.2.2: Ensures default values for filopodia type and lifetime come from a single source
{sopsim-0.2.0 → sopsim-0.2.2}/README.md RENAMED
@@ -18,7 +18,7 @@ The official SOPSim website is available at (*link coming soon*).
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  Inside your command line, type:
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  ```bash
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- pip install -i https://test.pypi.org/simple/ sopsim==0.1.6
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+ pip install sopsim
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  ```
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  to install the package.
@@ -111,3 +111,6 @@ Important:
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  - For other `Nc` values, the simulation uses fresh random draws each run -->
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  - *`Nc = 4` implies a 4x4 tissue
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  - `Nc>=10` can take many hours to run, so start smaller when testing
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+
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+ ## Bug fixes:
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+ - 0.2.2: Ensures default values for filopodia type and lifetime come from a single source
{sopsim-0.2.0 → sopsim-0.2.2}/pyproject.toml RENAMED
@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
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  [project]
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  name = "sopsim"
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- version = "0.2.0"
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+ version = "0.2.2"
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  description = "SOPSim simulation library"
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  readme = "README.md"
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  requires-python = ">=3.9"
{sopsim-0.2.0 → sopsim-0.2.2}/sopsim/cli.py RENAMED
@@ -24,9 +24,8 @@ from .config import (
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  )
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  from .core import sopsim
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- DEFAULT_FILOPODIA_TYPE = SimulationInputs().filopodia_type
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- DEFAULT_FILOPODIA_LIFE_TIME = SimulationInputs().filopodia_life_time
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-
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+ DEFAULT_FILOPODIA_TYPE = SimulationInputs.__dataclass_fields__["filopodia_type"].default
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+ DEFAULT_FILOPODIA_LIFE_TIME = SimulationInputs.__dataclass_fields__["filopodia_life_time"].default
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  class SOPSimArgumentParser(argparse.ArgumentParser):
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  def error(self, message: str) -> None: # pragma: no cover - exercised through CLI behavior
{sopsim-0.2.0 → sopsim-0.2.2/sopsim.egg-info}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: sopsim
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- Version: 0.2.0
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+ Version: 0.2.2
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  Summary: SOPSim simulation library
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  Author: Olaolu Olugbenle, Dr. William Annan
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  Requires-Python: >=3.9
@@ -35,7 +35,7 @@ The official SOPSim website is available at (*link coming soon*).
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  Inside your command line, type:
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  ```bash
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- pip install -i https://test.pypi.org/simple/ sopsim==0.1.6
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+ pip install sopsim
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  ```
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  to install the package.
@@ -128,3 +128,6 @@ Important:
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  - For other `Nc` values, the simulation uses fresh random draws each run -->
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  - *`Nc = 4` implies a 4x4 tissue
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130
  - `Nc>=10` can take many hours to run, so start smaller when testing
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+
132
+ ## Bug fixes:
133
+ - 0.2.2: Ensures default values for filopodia type and lifetime come from a single source
{sopsim-0.2.0 → sopsim-0.2.2}/MANIFEST.in RENAMED
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{sopsim-0.2.0 → sopsim-0.2.2}/setup.cfg RENAMED
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{sopsim-0.2.0 → sopsim-0.2.2}/sopsim/__init__.py RENAMED
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{sopsim-0.2.0 → sopsim-0.2.2}/sopsim/__main__.py RENAMED
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{sopsim-0.2.0 → sopsim-0.2.2}/sopsim/artifacts.py RENAMED
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{sopsim-0.2.0 → sopsim-0.2.2}/sopsim/config.py RENAMED
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{sopsim-0.2.0 → sopsim-0.2.2}/sopsim/core.py RENAMED
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{sopsim-0.2.0 → sopsim-0.2.2}/sopsim/delta_in.py RENAMED
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{sopsim-0.2.0 → sopsim-0.2.2}/sopsim/filop_lent.py RENAMED
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{sopsim-0.2.0 → sopsim-0.2.2}/sopsim/filop_vectors.py RENAMED
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{sopsim-0.2.0 → sopsim-0.2.2}/sopsim/mat_files/Ang.mat RENAMED
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{sopsim-0.2.0 → sopsim-0.2.2}/sopsim/mat_files/F2.mat RENAMED
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{sopsim-0.2.0 → sopsim-0.2.2}/sopsim/reference_data.py RENAMED
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{sopsim-0.2.0 → sopsim-0.2.2}/sopsim/run_sopsim.py RENAMED
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{sopsim-0.2.0 → sopsim-0.2.2}/sopsim/server.py RENAMED
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{sopsim-0.2.0 → sopsim-0.2.2}/sopsim/two_d_geom.py RENAMED
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{sopsim-0.2.0 → sopsim-0.2.2}/tests/test_api_types.py RENAMED
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{sopsim-0.2.0 → sopsim-0.2.2}/tests/test_cli.py RENAMED
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{sopsim-0.2.0 → sopsim-0.2.2}/tests/test_config.py RENAMED
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{sopsim-0.2.0 → sopsim-0.2.2}/tests/test_server.py RENAMED
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