snakemake-software-deployment-plugin-container 0.7.2__tar.gz → 0.7.3__tar.gz

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Files changed (11) hide show
  1. {snakemake_software_deployment_plugin_container-0.7.2 → snakemake_software_deployment_plugin_container-0.7.3}/CHANGELOG.md +7 -0
  2. {snakemake_software_deployment_plugin_container-0.7.2 → snakemake_software_deployment_plugin_container-0.7.3}/PKG-INFO +1 -1
  3. {snakemake_software_deployment_plugin_container-0.7.2 → snakemake_software_deployment_plugin_container-0.7.3}/pyproject.toml +1 -1
  4. {snakemake_software_deployment_plugin_container-0.7.2 → snakemake_software_deployment_plugin_container-0.7.3}/src/snakemake_software_deployment_plugin_container/__init__.py +9 -1
  5. {snakemake_software_deployment_plugin_container-0.7.2 → snakemake_software_deployment_plugin_container-0.7.3}/.github/workflows/ci.yml +0 -0
  6. {snakemake_software_deployment_plugin_container-0.7.2 → snakemake_software_deployment_plugin_container-0.7.3}/.github/workflows/conventional-prs.yml +0 -0
  7. {snakemake_software_deployment_plugin_container-0.7.2 → snakemake_software_deployment_plugin_container-0.7.3}/.github/workflows/release-please.yml +0 -0
  8. {snakemake_software_deployment_plugin_container-0.7.2 → snakemake_software_deployment_plugin_container-0.7.3}/.gitignore +0 -0
  9. {snakemake_software_deployment_plugin_container-0.7.2 → snakemake_software_deployment_plugin_container-0.7.3}/LICENSE +0 -0
  10. {snakemake_software_deployment_plugin_container-0.7.2 → snakemake_software_deployment_plugin_container-0.7.3}/README.md +0 -0
  11. {snakemake_software_deployment_plugin_container-0.7.2 → snakemake_software_deployment_plugin_container-0.7.3}/tests/test_plugin.py +0 -0
@@ -1,5 +1,12 @@
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  # Changelog
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+ ## [0.7.3](https://github.com/snakemake/snakemake-software-deployment-plugin-container/compare/v0.7.2...v0.7.3) (2026-09-10)
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+
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+
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+ ### Bug Fixes
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+
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+ * add quiet flag to udocker execution ([fcb5780](https://github.com/snakemake/snakemake-software-deployment-plugin-container/commit/fcb57800287a59cee68c1ec87a47d17a304ce207))
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+
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  ## [0.7.2](https://github.com/snakemake/snakemake-software-deployment-plugin-container/compare/v0.7.1...v0.7.2) (2026-09-08)
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@@ -1,6 +1,6 @@
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  Metadata-Version: 2.5
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  Name: snakemake-software-deployment-plugin-container
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- Version: 0.7.2
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+ Version: 0.7.3
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  Project-URL: repository, https://github.com/snakemake/snakemake-software-deployment-plugin-container
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  Project-URL: documentation, https://snakemake.github.io/snakemake-plugin-catalog/plugins/software-deployment/container.html
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  Author-email: Ben Carrillo <ben.uzh@pm.me>, Johannes Köster <johannes.koester@uni-due.de>
@@ -1,6 +1,6 @@
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  [project]
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  name = "snakemake-software-deployment-plugin-container"
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- version = "0.7.2"
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+ version = "0.7.3"
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  authors = [
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  { name = "Ben Carrillo", email = "ben.uzh@pm.me" },
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  { name = "Johannes Köster", email = "johannes.koester@uni-due.de" }
@@ -218,6 +218,9 @@ class RuntimeManager:
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  @abstractmethod
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  def deploy_cmd(self) -> str | None: ...
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+ def pre_subcommand_options(self) -> str:
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+ return ""
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+
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  def options(self) -> str:
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  return "--rm"
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@@ -256,7 +259,9 @@ class RuntimeManager:
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  def decorate_shellcmd(self, cmd: str) -> str:
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  mountpoints = self.get_mountpoint_args()
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  return (
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- f"{self.env.settings.runtime} {self.subcommand()}"
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+ f"{self.env.settings.runtime}"
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+ f" {self.pre_subcommand_options()}"
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+ f" {self.subcommand()}"
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  f" {self.options()}"
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  f" {self.workdir_option()} {getcwd()!r}" # Working directory inside container
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  f" {mountpoints}"
@@ -319,6 +324,9 @@ class RuntimeManagerDocker(RuntimeManager):
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  class RuntimeManagerUdocker(RuntimeManager):
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+ def pre_subcommand_options(self) -> str:
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+ return "--quiet"
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+
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  def options(self) -> str:
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  options = super().options()
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  options += " --nobanner --env TINI_SUBREAPER=1"