snakemake-interface-software-deployment-plugins 0.18.6__tar.gz → 0.19.1__tar.gz

{snakemake_interface_software_deployment_plugins-0.18.6 → snakemake_interface_software_deployment_plugins-0.19.1}/CHANGELOG.md

@@ -1,5 +1,20 @@
 # Changelog
 
+## [0.19.1](https://github.com/snakemake/snakemake-interface-software-deployment-plugins/compare/v0.19.0...v0.19.1) (2026-09-07)
+
+
+### Bug Fixes
+
+* update twine to match changes in hatchling ([ab1db16](https://github.com/snakemake/snakemake-interface-software-deployment-plugins/commit/ab1db1637eb086e09907d960f3c639a556260b8b))
+
+## [0.19.0](https://github.com/snakemake/snakemake-interface-software-deployment-plugins/compare/v0.18.6...v0.19.0) (2026-09-07)
+
+
+### Features
+
+* add method for workspace setup within tmp_path ([48591e7](https://github.com/snakemake/snakemake-interface-software-deployment-plugins/commit/48591e70773b4b58f32d2c2f019c7cbd9a9fdec6))
+* provide envvars set for passing them to environments/containers ([#65](https://github.com/snakemake/snakemake-interface-software-deployment-plugins/issues/65)) ([ab0aa11](https://github.com/snakemake/snakemake-interface-software-deployment-plugins/commit/ab0aa1198bdece1d0a96f6c59202f0b32d0fd5fd))
+
 ## [0.18.6](https://github.com/snakemake/snakemake-interface-software-deployment-plugins/compare/v0.18.5...v0.18.6) (2026-08-05)
 
 

{snakemake_interface_software_deployment_plugins-0.18.6 → snakemake_interface_software_deployment_plugins-0.19.1}/PKG-INFO

@@ -1,6 +1,6 @@
-Metadata-Version: 2.4
+Metadata-Version: 2.5
 Name: snakemake-interface-software-deployment-plugins
-Version: 0.18.6
+Version: 0.19.1
 Summary: This package provides a stable interface for interactions between Snakemake and its software deployment plugins.
 Project-URL: repository, https://github.com/snakemake/snakemake-interface-software-deployment-plugins
 Project-URL: homepage, https://snakemake.github.io
@@ -9,7 +9,7 @@ License-Expression: MIT
 License-File: LICENSE
 Requires-Python: <4.0,>=3.11
 Requires-Dist: argparse-dataclass<3.0,>=2.0.0
-Requires-Dist: snakemake-interface-common<2.0.0,>=1.23.0
+Requires-Dist: snakemake-interface-common<2.0.0,>=1.23.1
 Description-Content-Type: text/markdown
 
 # Stable interfaces and functionality for Snakemake software deployment plugins

{snakemake_interface_software_deployment_plugins-0.18.6 → snakemake_interface_software_deployment_plugins-0.19.1}/pyproject.toml

@@ -6,11 +6,11 @@ description = "This package provides a stable interface for interactions between
 license = "MIT"
 name = "snakemake-interface-software-deployment-plugins"
 readme = "README.md"
-version = "0.18.6"
+version = "0.19.1"
 requires-python = ">=3.11,<4.0"
 dependencies = [
     "argparse-dataclass >=2.0.0,<3.0",
-    "snakemake-interface-common >=1.23.0,<2.0.0"
+    "snakemake-interface-common >=1.23.1,<2.0.0"
 ]
 
 [project.urls]
@@ -60,7 +60,7 @@ exclude_lines = ["pass", "\\.\\.\\."]
 fail_under = 61.0
 
 [tool.pixi.feature.publish.pypi-dependencies]
-twine = ">=6.1.0,<7"
+twine = ">=7.0.0,<8"
 build = ">=1.2.2,<2"
 
 

{snakemake_interface_software_deployment_plugins-0.18.6 → snakemake_interface_software_deployment_plugins-0.19.1}/snakemake_interface_software_deployment_plugins/__init__.py

@@ -1,3 +1,4 @@
+from collections.abc import Set
 import tempfile
 import os
 
@@ -203,6 +204,7 @@ class EnvBase(ABC):
         settings,
         shell_executable: ShellExecutable,
         mountpoints: List[Path],
+        envvars: Set[str],
         tempdir: Path,
         cache_prefix: Path,
         deployment_prefix: Path,
@@ -214,6 +216,7 @@ class EnvBase(ABC):
         self.settings = settings
         self.shell_executable = shell_executable
         self.mountpoints = [mountpoint.absolute() for mountpoint in mountpoints]
+        self.envvars = envvars
         self.tempdir = tempdir
         self._deployment_prefix: Path = deployment_prefix
         self._cache_prefix: Path = cache_prefix

{snakemake_interface_software_deployment_plugins-0.18.6 → snakemake_interface_software_deployment_plugins-0.19.1}/snakemake_interface_software_deployment_plugins/tests.py

@@ -176,7 +176,16 @@ class TestSoftwareDeploymentBase(ABC):
                 source_file.cached = Path(source_file.path_or_uri)
         return spec
 
+    def setup_workspace(self, tmp_path) -> None:
+        """
+        Setup a workspace for testing. This method can be overridden by subclasses
+        to provide additional setup steps.
+        """
+        pass
+
     def _get_env(self, tmp_path) -> EnvBase:
+        self.setup_workspace(tmp_path)
+
         env_cls = self.get_env_cls()
         spec = self._get_cached_env_spec()
         settings = self.get_settings()