snakemake-interface-software-deployment-plugins 0.16.0__tar.gz → 0.16.2__tar.gz

{snakemake_interface_software_deployment_plugins-0.16.0 → snakemake_interface_software_deployment_plugins-0.16.2}/CHANGELOG.md

@@ -1,5 +1,20 @@
 # Changelog
 
+## [0.16.2](https://github.com/snakemake/snakemake-interface-software-deployment-plugins/compare/v0.16.1...v0.16.2) (2026-03-09)
+
+
+### Bug Fixes
+
+* call identity attribute method ([33f7a56](https://github.com/snakemake/snakemake-interface-software-deployment-plugins/commit/33f7a56c83d84459d5616fc3f20cb5b704f64ad0))
+* make EnvSpecSourceFile hashable and comparable ([b6b6dc9](https://github.com/snakemake/snakemake-interface-software-deployment-plugins/commit/b6b6dc9f594e1b07818371b1df09461fdc0795e4))
+
+## [0.16.1](https://github.com/snakemake/snakemake-interface-software-deployment-plugins/compare/v0.16.0...v0.16.1) (2026-03-08)
+
+
+### Bug Fixes
+
+* use SoftwareReport from snakemake-interface-common ([09d79f0](https://github.com/snakemake/snakemake-interface-software-deployment-plugins/commit/09d79f0aface540b53378e1c29a62700e74b312f))
+
 ## [0.16.0](https://github.com/snakemake/snakemake-interface-software-deployment-plugins/compare/v0.15.0...v0.16.0) (2026-03-08)
 
 

{snakemake_interface_software_deployment_plugins-0.16.0 → snakemake_interface_software_deployment_plugins-0.16.2}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: snakemake-interface-software-deployment-plugins
-Version: 0.16.0
+Version: 0.16.2
 Summary: This package provides a stable interface for interactions between Snakemake and its software deployment plugins.
 Project-URL: repository, https://github.com/snakemake/snakemake-interface-software-deployment-plugins
 Author-email: Johannes Köster <johannes.koester@uni-due.de>
@@ -8,7 +8,7 @@ License-Expression: MIT
 License-File: LICENSE
 Requires-Python: <4.0,>=3.11
 Requires-Dist: argparse-dataclass<3.0,>=2.0.0
-Requires-Dist: snakemake-interface-common<2.0.0,>=1.17.4
+Requires-Dist: snakemake-interface-common<2.0.0,>=1.23.0
 Description-Content-Type: text/markdown
 
 # Stable interfaces and functionality for Snakemake software deployment plugins

{snakemake_interface_software_deployment_plugins-0.16.0 → snakemake_interface_software_deployment_plugins-0.16.2}/pyproject.toml

@@ -6,11 +6,11 @@ description = "This package provides a stable interface for interactions between
 license = "MIT"
 name = "snakemake-interface-software-deployment-plugins"
 readme = "README.md"
-version = "0.16.0"
+version = "0.16.2"
 requires-python = ">=3.11,<4.0"
 dependencies = [
     "argparse-dataclass >=2.0.0,<3.0",
-    "snakemake-interface-common >=1.17.4,<2.0.0"
+    "snakemake-interface-common >=1.23.0,<2.0.0"
 ]
 
 [project.urls]
@@ -31,13 +31,11 @@ platforms = ["osx-arm64", "linux-64"]
 dev = { features = ["dev"] }
 publish = { features = ["publish"] }
 
-[tool.pixi.feature.dev.dependencies]
+[tool.pixi.feature.dev.pypi-dependencies]
 pytest = ">=8.3.5,<9"
 ruff = ">=0.10.0,<0.11"
 pytest-cov = ">=6.0.0,<7"
 pyrefly = ">=0.52.0,<0.53"
-
-[tool.pixi.feature.dev.pypi-dependencies]
 snakemake-software-deployment-plugin-envmodules = ">=0.1.2,<1.0"
 
 [tool.pixi.feature.dev.tasks]
@@ -58,11 +56,11 @@ cmd = [
 
 [tool.coverage.report]
 exclude_lines = ["pass", "\\.\\.\\."]
-fail_under = 63.0
+fail_under = 61.0
 
-[tool.pixi.feature.publish.dependencies]
+[tool.pixi.feature.publish.pypi-dependencies]
 twine = ">=6.1.0,<7"
-python-build = ">=1.2.2,<2"
+build = ">=1.2.2,<2"
 
 
 [tool.pixi.feature.publish.tasks]

{snakemake_interface_software_deployment_plugins-0.16.0 → snakemake_interface_software_deployment_plugins-0.16.2}/snakemake_interface_software_deployment_plugins/__init__.py

@@ -30,13 +30,7 @@ from typing import (
 import subprocess as sp
 
 from snakemake_interface_common.exceptions import WorkflowError
-
-
-@dataclass
-class SoftwareReport:
-    name: str
-    version: Optional[str] = None
-    is_secondary: bool = False
+from snakemake_interface_common.software import SoftwareReport
 
 
 @dataclass
@@ -44,6 +38,14 @@ class EnvSpecSourceFile:
     path_or_uri: Union[str, Path]
     cached: Optional[Path] = field(repr=False, default=None)
 
+    def __eq__(self, other) -> bool:
+        if not isinstance(other, EnvSpecSourceFile):
+            return False
+        return self.path_or_uri == other.path_or_uri
+
+    def __hash__(self) -> int:
+        return hash(self.path_or_uri)
+
 
 class EnvSpecBase(ABC):
     @classmethod
@@ -109,7 +111,7 @@ class EnvSpecBase(ABC):
             self_or_copied = copy(self)
         else:
             return self
-        for attr_name in getattr(self_or_copied, attribute_method):
+        for attr_name in getattr(self_or_copied, attribute_method)():
             current_value = getattr(self_or_copied, attr_name)
             if current_value is not None:
                 setattr(self_or_copied, attr_name, modify_func(current_value))
@@ -185,7 +187,7 @@ class EnvBase(ABC):
         cache_prefix: Path,
         deployment_prefix: Path,
         pinfile_prefix: Path,
-    ):
+    ) -> None:
         # type annotation for spec and settings is left for implementing plugins
         self.spec = spec
         self.within = within

{snakemake_interface_software_deployment_plugins-0.16.0 → snakemake_interface_software_deployment_plugins-0.16.2}/tests/test_interface.py

@@ -1,3 +1,5 @@
+from snakemake_interface_software_deployment_plugins import EnvSpecSourceFile
+from pathlib import Path
 from typing import List
 from snakemake_interface_software_deployment_plugins.registry import (
     SoftwareDeploymentPluginRegistry,
@@ -29,3 +31,7 @@ class TestRegistry(TestRegistryBase):
 
     def get_example_args(self) -> List[str]:
         return []
+
+
+def test_env_spec_source_file():
+    EnvSpecSourceFile(path_or_uri="test.yaml", cached=Path("test.yaml"))