slide2vec 4.5.0__tar.gz → 4.5.1__tar.gz

{slide2vec-4.5.0 → slide2vec-4.5.1}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: slide2vec
-Version: 4.5.0
+Version: 4.5.1
 Summary: Embedding of whole slide images with Foundation Models
 Author-email: Clément Grisi <clement.grisi@radboudumc.nl>
 License-Expression: Apache-2.0
@@ -15,7 +15,7 @@ Classifier: Programming Language :: Python :: 3.13
 Requires-Python: >=3.10
 Description-Content-Type: text/markdown
 License-File: LICENSE
-Requires-Dist: hs2p[asap,cucim,openslide,sam2,vips]>=4.0.5
+Requires-Dist: hs2p[asap,cucim,openslide,sam2,vips]>=4.0.6
 Requires-Dist: omegaconf
 Requires-Dist: matplotlib
 Requires-Dist: numpy<2
@@ -65,7 +65,7 @@ Requires-Dist: numpy<2; extra == "fm"
 Requires-Dist: pandas; extra == "fm"
 Requires-Dist: pillow; extra == "fm"
 Requires-Dist: rich; extra == "fm"
-Requires-Dist: hs2p[asap,cucim,openslide,sam2,vips]>=4.0.5; extra == "fm"
+Requires-Dist: hs2p[asap,cucim,openslide,sam2,vips]>=4.0.6; extra == "fm"
 Requires-Dist: wandb; extra == "fm"
 Requires-Dist: torch<2.8,>=2.3; extra == "fm"
 Requires-Dist: torchvision>=0.18.0; extra == "fm"

{slide2vec-4.5.0 → slide2vec-4.5.1}/pyproject.toml

@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
 
 [project]
 name = "slide2vec"
-version = "4.5.0"
+version = "4.5.1"
 description = "Embedding of whole slide images with Foundation Models"
 readme = "README.md"
 requires-python = ">=3.10"
@@ -21,7 +21,7 @@ classifiers = [
     "Programming Language :: Python :: 3.13",
 ]
 dependencies = [
-    "hs2p[asap,cucim,openslide,sam2,vips]>=4.0.5",
+    "hs2p[asap,cucim,openslide,sam2,vips]>=4.0.6",
     "omegaconf",
     "matplotlib",
     "numpy<2",
@@ -88,7 +88,7 @@ fm = [
     "pandas",
     "pillow",
     "rich",
-    "hs2p[asap,cucim,openslide,sam2,vips]>=4.0.5",
+    "hs2p[asap,cucim,openslide,sam2,vips]>=4.0.6",
     "wandb",
     "torch>=2.3,<2.8",
     "torchvision>=0.18.0",
@@ -164,7 +164,7 @@ no_implicit_reexport = true
 max-line-length = 160
 
 [tool.bumpver]
-current_version = "4.5.0"
+current_version = "4.5.1"
 version_pattern = "MAJOR.MINOR.PATCH"
 commit = false       # We do version bumping in CI, not as a commit
 tag = false          # Git tag already exists — we don't auto-tag

{slide2vec-4.5.0 → slide2vec-4.5.1}/slide2vec/__init__.py

@@ -11,7 +11,7 @@ from slide2vec.api import (
 from slide2vec.artifacts import HierarchicalEmbeddingArtifact, SlideEmbeddingArtifact, TileEmbeddingArtifact
 
 
-__version__ = "4.5.0"
+__version__ = "4.5.1"
 
 __all__ = [
     "Model",

{slide2vec-4.5.0 → slide2vec-4.5.1}/slide2vec/progress.py

@@ -699,7 +699,10 @@ def read_tiling_progress_snapshot(process_list_path: str | Path, *, expected_tot
     path = Path(process_list_path)
     if not path.is_file():
         return None
-    df = pd.read_csv(path)
+    try:
+        df = pd.read_csv(path)
+    except (pd.errors.EmptyDataError, pd.errors.ParserError):
+        return None
     if "tiling_status" not in df.columns:
         return None
     statuses = df["tiling_status"].fillna("tbp").astype(str)

{slide2vec-4.5.0 → slide2vec-4.5.1}/slide2vec.egg-info/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: slide2vec
-Version: 4.5.0
+Version: 4.5.1
 Summary: Embedding of whole slide images with Foundation Models
 Author-email: Clément Grisi <clement.grisi@radboudumc.nl>
 License-Expression: Apache-2.0
@@ -15,7 +15,7 @@ Classifier: Programming Language :: Python :: 3.13
 Requires-Python: >=3.10
 Description-Content-Type: text/markdown
 License-File: LICENSE
-Requires-Dist: hs2p[asap,cucim,openslide,sam2,vips]>=4.0.5
+Requires-Dist: hs2p[asap,cucim,openslide,sam2,vips]>=4.0.6
 Requires-Dist: omegaconf
 Requires-Dist: matplotlib
 Requires-Dist: numpy<2
@@ -65,7 +65,7 @@ Requires-Dist: numpy<2; extra == "fm"
 Requires-Dist: pandas; extra == "fm"
 Requires-Dist: pillow; extra == "fm"
 Requires-Dist: rich; extra == "fm"
-Requires-Dist: hs2p[asap,cucim,openslide,sam2,vips]>=4.0.5; extra == "fm"
+Requires-Dist: hs2p[asap,cucim,openslide,sam2,vips]>=4.0.6; extra == "fm"
 Requires-Dist: wandb; extra == "fm"
 Requires-Dist: torch<2.8,>=2.3; extra == "fm"
 Requires-Dist: torchvision>=0.18.0; extra == "fm"

{slide2vec-4.5.0 → slide2vec-4.5.1}/slide2vec.egg-info/requires.txt

@@ -1,4 +1,4 @@
-hs2p[asap,cucim,openslide,sam2,vips]>=4.0.5
+hs2p[asap,cucim,openslide,sam2,vips]>=4.0.6
 omegaconf
 matplotlib
 numpy<2
@@ -27,7 +27,7 @@ numpy<2
 pandas
 pillow
 rich
-hs2p[asap,cucim,openslide,sam2,vips]>=4.0.5
+hs2p[asap,cucim,openslide,sam2,vips]>=4.0.6
 wandb
 torch<2.8,>=2.3
 torchvision>=0.18.0

{slide2vec-4.5.0 → slide2vec-4.5.1}/tests/test_progress.py

@@ -555,6 +555,15 @@ def test_read_tiling_progress_snapshot_summarizes_process_list(tmp_path: Path):
     assert snapshot.discovered_tiles == 10
 
 
+def test_read_tiling_progress_snapshot_ignores_transient_empty_process_list(tmp_path: Path):
+    import slide2vec.progress as progress
+
+    process_list_path = tmp_path / "process_list.csv"
+    process_list_path.write_text("", encoding="utf-8")
+
+    assert progress.read_tiling_progress_snapshot(process_list_path, expected_total=3) is None
+
+
 def test_build_direct_embed_worker_request_payload_includes_progress_events_path(tmp_path: Path):
     import slide2vec.inference as inference