skinoptics 0.0.1b2__tar.gz → 0.0.1b4__tar.gz

{skinoptics-0.0.1b2 → skinoptics-0.0.1b4}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: skinoptics
-Version: 0.0.1b2
+Version: 0.0.1b4
 Summary: SkinOptics: a python package with tools for building human skin computational models for Monte Carlo simulations of light transport
 Author-email: Victor Lima <victorporto@ifsc.usp.br>
 Project-URL: Homepage, https://github.com/victorportog/skinoptics

{skinoptics-0.0.1b2 → skinoptics-0.0.1b4}/pyproject.toml

@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
 
 [project]
 name = "skinoptics"
-version = "0.0.1b2"
+version = "0.0.1b4"
 authors = [
   { name="Victor Lima", email="victorporto@ifsc.usp.br"},
 ]
@@ -26,4 +26,4 @@ dependencies = [
 Homepage = "https://github.com/victorportog/skinoptics"
 
 [tool.setuptools]
-packages = ["skinoptics", "datasets"]
+packages = ["skinoptics", "skinoptics.datasets"]

{skinoptics-0.0.1b2 → skinoptics-0.0.1b4}/skinoptics/__init__.py

@@ -26,6 +26,8 @@ Copyright (C) 2024 Victor Lima
 | Version History:
 | 0.0.1b1 - release date: 2024 October 10
 | 0.0.1b2 - release date: 2024 October 18
+| 0.0.1b3 - release date: 2024 October 18
+| 0.0.1b4 - release date: 2024 October 18
 '''
 
 __all__ = ['utils', 'dataframes',
@@ -36,7 +38,7 @@ __all__ = ['utils', 'dataframes',
 __version__major = '0'
 __version__minor = '0'
 __version__micro = '1'
-__version__suffix = 'b2'
+__version__suffix = 'b4'
 
 __author__ = "Victor Lima"
 __copyright__ = "Copyright (c) 2024 Victor Lima"

skinoptics-0.0.1b4/skinoptics/dataframes.py

@@ -0,0 +1,98 @@
+'''
+| SkinOptics
+| Copyright (C) 2024 Victor Lima
+
+    | This program is free software: you can redistribute it and/or modify
+    | it under the terms of the GNU General Public License as published by
+    | the Free Software Foundation, either version 3 of the License, or
+    | (at your option) any later version.
+
+    | This program is distributed in the hope that it will be useful,
+    | but WITHOUT ANY WARRANTY; without even the implied warranty of
+    | MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+    | GNU General Public License for more details.
+
+    | You should have received a copy of the GNU General Public License
+    | along with this program.  If not, see <https://www.gnu.org/licenses/>.
+    
+| Victor Lima
+| victorporto\@ifsc.usp.br
+| victor.lima\@ufscar.br
+
+| Release Date:
+| October 2024
+| Last Modification:
+| October 2024
+
+| Example:
+| wps_dataframe (respective to datasets/colors/wps.txt)
+
++--------------+------------+---------+---------+---------+
+| illuminant   | observer   |   Xn[-] |   Yn[-] |   Zn[-] |
++==============+============+=========+=========+=========+
+| A            | 2o         |  1.0985 |       1 |  0.3558 |
++--------------+------------+---------+---------+---------+
+| D50          | 2o         |  0.9641 |       1 |  0.8250 |
++--------------+------------+---------+---------+---------+
+| D55          | 2o         |  0.9568 |       1 |  0.9214 |
++--------------+------------+---------+---------+---------+
+| D65          | 2o         |  0.9504 |       1 |  1.0888 |
++--------------+------------+---------+---------+---------+
+| D75          | 2o         |  0.9497 |       1 |  1.2257 |
++--------------+------------+---------+---------+---------+
+| A            | 10o        |  1.1114 |       1 |  0.3520 |
++--------------+------------+---------+---------+---------+
+| D50          | 10o        |  0.9671 |       1 |  0.8141 |
++--------------+------------+---------+---------+---------+
+| D55          | 10o        |  0.9580 |       1 |  0.9093 |
++--------------+------------+---------+---------+---------+
+| D65          | 10o        |  0.9481 |       1 |  1.0733 |
++--------------+------------+---------+---------+---------+
+| D75          | 10o        |  0.9442 |       1 |  1.2060 |
++--------------+------------+---------+---------+---------+
+'''
+
+import os
+import pandas as pd
+
+folder0 = os.path.dirname(os.path.abspath(__file__))
+folder1 = os.path.join(folder0, 'datasets', 'optical_properties')
+
+ext_and_molarext_eum_Sarna_dataframe = pd.read_csv(os.path.join(folder1, 'ext_and_molarext_eum_Sarna.txt'), sep = ' ') 
+ext_and_molarext_phe_Sarna_dataframe = pd.read_csv(os.path.join(folder1, 'ext_and_molarext_phe_Sarna.txt'), sep = ' ')
+ext_and_molarext_oxy_and_deo_Prahl_dataframe = pd.read_csv(os.path.join(folder1, 'ext_and_molarext_oxy_and_deo_Prahl.txt'), sep = ' ')
+molarext_bil_Li_dataframe = pd.read_csv(os.path.join(folder1, 'molarext_bil_Li.txt'), sep = ' ')
+
+mua_wat_Hale_dataframe = pd.read_csv(os.path.join(folder1, 'mua_wat_Hale.txt'), sep = ' ')
+mua_wat_Segelstein_dataframe = pd.read_csv(os.path.join(folder1, 'mua_wat_Segelstein.txt'), sep = ' ')
+mua_fat_vanVeen_dataframe = pd.read_csv(os.path.join(folder1, 'mua_fat_vanVeen.txt'), sep = ' ')
+
+EP_Salomatina_dataframe = pd.read_csv(os.path.join(folder1, 'EP_Salomatina.txt'), sep = ' ')
+DE_Salomatina_dataframe = pd.read_csv(os.path.join(folder1, 'DE_Salomatina.txt'), sep = ' ')
+HY_Salomatina_dataframe = pd.read_csv(os.path.join(folder1, 'HY_Salomatina.txt'), sep = ' ')
+iBCC_Salomatina_dataframe = pd.read_csv(os.path.join(folder1, 'iBCC_Salomatina.txt'), sep = ' ')
+nBCC_Salomatina_dataframe = pd.read_csv(os.path.join(folder1, 'nBCC_Salomatina.txt'), sep = ' ')
+SCC_Salomatina_dataframe = pd.read_csv(os.path.join(folder1, 'SCC_Salomatina.txt'), sep = ' ')
+EP_Shimojo_dataframe = pd.read_csv(os.path.join(folder1, 'EP_Shimojo.txt'), sep = ' ')
+DE_Shimojo_dataframe = pd.read_csv(os.path.join(folder1, 'DE_Shimojo.txt'), sep = ' ')
+HY_Shimojo_dataframe = pd.read_csv(os.path.join(folder1, 'HY_Shimojo.txt'), sep = ' ')
+
+n_and_k_EP_Ding_dataframe = pd.read_csv(os.path.join(folder1, 'n_and_k_EP_Ding.txt'), sep = ' ')
+n_and_k_DE_Ding_dataframe = pd.read_csv(os.path.join(folder1, 'n_and_k_DE_Ding.txt'), sep = ' ')
+n_HY_Matiatou_dataframe = pd.read_csv(os.path.join(folder1, 'n_HY_Matiatou.txt'), sep = ' ')
+n_AT_Matiatou_dataframe = pd.read_csv(os.path.join(folder1, 'n_AT_Matiatou.txt'), sep = ' ')
+beta_oxy_Friebel_dataframe = pd.read_csv(os.path.join(folder1, 'beta_oxy_Friebel.txt'), sep = ' ')
+
+n_and_k_wat_Hale_dataframe = pd.read_csv(os.path.join(folder1, 'n_and_k_wat_Hale.txt'), sep = ' ')
+n_and_k_wat_Segelstein_dataframe = pd.read_csv(os.path.join(folder1, 'n_and_k_wat_Segelstein.txt'), sep = ' ')
+oxy_and_deo_Bosschaart_dataframe = pd.read_csv(os.path.join(folder1, 'oxy_and_deo_Bosschaart.txt'), sep = ' ')
+
+folder2 = os.path.joint(folder0, 'datasets', 'colors')
+
+rspds_A_D50_D65_dataframe = pd.read_csv(os.path.join(folder2, 'rspds_A_D50_D65.txt'), sep = ' ')
+rspds_D55_D75_dataframe = pd.read_csv(os.path.join(folder2, 'rspds_D55_D75.txt'), sep = ' ')
+cmfs_dataframe = pd.read_csv(os.path.join(folder2, 'cmfs.txt'), sep = ' ')
+wps_dataframe = pd.read_csv(os.path.join(folder2, 'wps.txt'), sep = ' ')
+
+Lab_Alaluf2002_dataframe = pd.read_csv(os.path.join(folder2, 'Lab_Alaluf2002.txt'), sep = ' ')
+Lab_Xiao2017_dataframe = pd.read_csv(os.path.join(folder2, 'Lab_Xiao2017.txt'), sep = ' ')

{skinoptics-0.0.1b2 → skinoptics-0.0.1b4}/skinoptics.egg-info/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: skinoptics
-Version: 0.0.1b2
+Version: 0.0.1b4
 Summary: SkinOptics: a python package with tools for building human skin computational models for Monte Carlo simulations of light transport
 Author-email: Victor Lima <victorporto@ifsc.usp.br>
 Project-URL: Homepage, https://github.com/victorportog/skinoptics

{skinoptics-0.0.1b2 → skinoptics-0.0.1b4}/skinoptics.egg-info/SOURCES.txt

@@ -2,38 +2,6 @@ LICENSE.txt
 README.md
 pyproject.toml
 readthedocs.yaml
-datasets/colors/Lab_Alaluf2002.txt
-datasets/colors/Lab_Xiao2017.txt
-datasets/colors/cmfs.txt
-datasets/colors/rspds_A_D50_D65.txt
-datasets/colors/rspds_D55_D75.txt
-datasets/colors/wps.txt
-datasets/optical_properties/DE_Salomatina.txt
-datasets/optical_properties/DE_Shimojo.txt
-datasets/optical_properties/EP_Salomatina.txt
-datasets/optical_properties/EP_Shimojo.txt
-datasets/optical_properties/HY_Salomatina.txt
-datasets/optical_properties/HY_Shimojo.txt
-datasets/optical_properties/SCC_Salomatina.txt
-datasets/optical_properties/beta_oxy_Friebel.txt
-datasets/optical_properties/ext_and_molarext_eum_Sarna.txt
-datasets/optical_properties/ext_and_molarext_oxy_and_deo_Prahl.txt
-datasets/optical_properties/ext_and_molarext_phe_Sarna.txt
-datasets/optical_properties/iBCC_Salomatina.txt
-datasets/optical_properties/molarext_bil_Li.txt
-datasets/optical_properties/mua_fat_vanVeen.txt
-datasets/optical_properties/mua_wat_Hale.txt
-datasets/optical_properties/mua_wat_Segelstein.txt
-datasets/optical_properties/nBCC_Salomatina.txt
-datasets/optical_properties/n_AT_Matiatou.txt
-datasets/optical_properties/n_HY_Matiatou.txt
-datasets/optical_properties/n_and_k_DE_Ding.txt
-datasets/optical_properties/n_and_k_EP_Ding.txt
-datasets/optical_properties/n_and_k_wat_Hale.txt
-datasets/optical_properties/n_and_k_wat_Segelstein.txt
-datasets/optical_properties/oxy_and_deo_Bosschaart.txt
-datasets/spectra/Xiao2016/skindatabaseSpectra/readmeSpectra.docx
-datasets/spectra/Xiao2016/skindatabaseSpectra/skin spectra data.xlsx
 docs/Makefile
 docs/make.bat
 docs/build/doctrees/01_utils.doctree
@@ -157,4 +125,36 @@ skinoptics.egg-info/PKG-INFO
 skinoptics.egg-info/SOURCES.txt
 skinoptics.egg-info/dependency_links.txt
 skinoptics.egg-info/requires.txt
-skinoptics.egg-info/top_level.txt
+skinoptics.egg-info/top_level.txt
+skinoptics/datasets/colors/Lab_Alaluf2002.txt
+skinoptics/datasets/colors/Lab_Xiao2017.txt
+skinoptics/datasets/colors/cmfs.txt
+skinoptics/datasets/colors/rspds_A_D50_D65.txt
+skinoptics/datasets/colors/rspds_D55_D75.txt
+skinoptics/datasets/colors/wps.txt
+skinoptics/datasets/optical_properties/DE_Salomatina.txt
+skinoptics/datasets/optical_properties/DE_Shimojo.txt
+skinoptics/datasets/optical_properties/EP_Salomatina.txt
+skinoptics/datasets/optical_properties/EP_Shimojo.txt
+skinoptics/datasets/optical_properties/HY_Salomatina.txt
+skinoptics/datasets/optical_properties/HY_Shimojo.txt
+skinoptics/datasets/optical_properties/SCC_Salomatina.txt
+skinoptics/datasets/optical_properties/beta_oxy_Friebel.txt
+skinoptics/datasets/optical_properties/ext_and_molarext_eum_Sarna.txt
+skinoptics/datasets/optical_properties/ext_and_molarext_oxy_and_deo_Prahl.txt
+skinoptics/datasets/optical_properties/ext_and_molarext_phe_Sarna.txt
+skinoptics/datasets/optical_properties/iBCC_Salomatina.txt
+skinoptics/datasets/optical_properties/molarext_bil_Li.txt
+skinoptics/datasets/optical_properties/mua_fat_vanVeen.txt
+skinoptics/datasets/optical_properties/mua_wat_Hale.txt
+skinoptics/datasets/optical_properties/mua_wat_Segelstein.txt
+skinoptics/datasets/optical_properties/nBCC_Salomatina.txt
+skinoptics/datasets/optical_properties/n_AT_Matiatou.txt
+skinoptics/datasets/optical_properties/n_HY_Matiatou.txt
+skinoptics/datasets/optical_properties/n_and_k_DE_Ding.txt
+skinoptics/datasets/optical_properties/n_and_k_EP_Ding.txt
+skinoptics/datasets/optical_properties/n_and_k_wat_Hale.txt
+skinoptics/datasets/optical_properties/n_and_k_wat_Segelstein.txt
+skinoptics/datasets/optical_properties/oxy_and_deo_Bosschaart.txt
+skinoptics/datasets/spectra/Xiao2016/skindatabaseSpectra/readmeSpectra.docx
+skinoptics/datasets/spectra/Xiao2016/skindatabaseSpectra/skin spectra data.xlsx

{skinoptics-0.0.1b2 → skinoptics-0.0.1b4}/skinoptics.egg-info/top_level.txt

@@ -1,2 +1 @@
-datasets
 skinoptics

skinoptics-0.0.1b2/skinoptics/dataframes.py

@@ -1,98 +0,0 @@
-'''
-| SkinOptics
-| Copyright (C) 2024 Victor Lima
-
-    | This program is free software: you can redistribute it and/or modify
-    | it under the terms of the GNU General Public License as published by
-    | the Free Software Foundation, either version 3 of the License, or
-    | (at your option) any later version.
-
-    | This program is distributed in the hope that it will be useful,
-    | but WITHOUT ANY WARRANTY; without even the implied warranty of
-    | MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-    | GNU General Public License for more details.
-
-    | You should have received a copy of the GNU General Public License
-    | along with this program.  If not, see <https://www.gnu.org/licenses/>.
-    
-| Victor Lima
-| victorporto\@ifsc.usp.br
-| victor.lima\@ufscar.br
-
-| Release Date:
-| October 2024
-| Last Modification:
-| October 2024
-
-| Example:
-| wps_dataframe (respective to datasets/colors/wps.txt)
-
-+--------------+------------+---------+---------+---------+
-| illuminant   | observer   |   Xn[-] |   Yn[-] |   Zn[-] |
-+==============+============+=========+=========+=========+
-| A            | 2o         |  1.0985 |       1 |  0.3558 |
-+--------------+------------+---------+---------+---------+
-| D50          | 2o         |  0.9641 |       1 |  0.8250 |
-+--------------+------------+---------+---------+---------+
-| D55          | 2o         |  0.9568 |       1 |  0.9214 |
-+--------------+------------+---------+---------+---------+
-| D65          | 2o         |  0.9504 |       1 |  1.0888 |
-+--------------+------------+---------+---------+---------+
-| D75          | 2o         |  0.9497 |       1 |  1.2257 |
-+--------------+------------+---------+---------+---------+
-| A            | 10o        |  1.1114 |       1 |  0.3520 |
-+--------------+------------+---------+---------+---------+
-| D50          | 10o        |  0.9671 |       1 |  0.8141 |
-+--------------+------------+---------+---------+---------+
-| D55          | 10o        |  0.9580 |       1 |  0.9093 |
-+--------------+------------+---------+---------+---------+
-| D65          | 10o        |  0.9481 |       1 |  1.0733 |
-+--------------+------------+---------+---------+---------+
-| D75          | 10o        |  0.9442 |       1 |  1.2060 |
-+--------------+------------+---------+---------+---------+
-'''
-
-import os
-import pandas as pd
-
-folder0 = os.path.dirname(os.path.abspath(__file__))[:-10]
-folder1 = folder0 + 'datasets\\optical_properties\\'
-
-ext_and_molarext_eum_Sarna_dataframe = pd.read_csv(folder1 + 'ext_and_molarext_eum_Sarna.txt', sep = ' ') 
-ext_and_molarext_phe_Sarna_dataframe = pd.read_csv(folder1 + 'ext_and_molarext_phe_Sarna.txt', sep = ' ')
-ext_and_molarext_oxy_and_deo_Prahl_dataframe = pd.read_csv(folder1 + 'ext_and_molarext_oxy_and_deo_Prahl.txt', sep = ' ')
-molarext_bil_Li_dataframe = pd.read_csv(folder1 + 'molarext_bil_Li.txt', sep = ' ')
-
-mua_wat_Hale_dataframe = pd.read_csv(folder1 + 'mua_wat_Hale.txt', sep = ' ')
-mua_wat_Segelstein_dataframe = pd.read_csv(folder1 + 'mua_wat_Segelstein.txt', sep = ' ')
-mua_fat_vanVeen_dataframe = pd.read_csv(folder1 + 'mua_fat_vanVeen.txt', sep = ' ')
-
-EP_Salomatina_dataframe = pd.read_csv(folder1 + 'EP_Salomatina.txt', sep = ' ')
-DE_Salomatina_dataframe = pd.read_csv(folder1 + 'DE_Salomatina.txt', sep = ' ')
-HY_Salomatina_dataframe = pd.read_csv(folder1 + 'HY_Salomatina.txt', sep = ' ')
-iBCC_Salomatina_dataframe = pd.read_csv(folder1 + 'iBCC_Salomatina.txt', sep = ' ')
-nBCC_Salomatina_dataframe = pd.read_csv(folder1 + 'nBCC_Salomatina.txt', sep = ' ')
-SCC_Salomatina_dataframe = pd.read_csv(folder1 + 'SCC_Salomatina.txt', sep = ' ')
-EP_Shimojo_dataframe = pd.read_csv(folder1 + 'EP_Shimojo.txt', sep = ' ')
-DE_Shimojo_dataframe = pd.read_csv(folder1 + 'DE_Shimojo.txt', sep = ' ')
-HY_Shimojo_dataframe = pd.read_csv(folder1 + 'HY_Shimojo.txt', sep = ' ')
-
-n_and_k_EP_Ding_dataframe = pd.read_csv(folder1 + 'n_and_k_EP_Ding.txt', sep = ' ')
-n_and_k_DE_Ding_dataframe = pd.read_csv(folder1 + 'n_and_k_DE_Ding.txt', sep = ' ')
-n_HY_Matiatou_dataframe = pd.read_csv(folder1 + 'n_HY_Matiatou.txt', sep = ' ')
-n_AT_Matiatou_dataframe = pd.read_csv(folder1 + 'n_AT_Matiatou.txt', sep = ' ')
-beta_oxy_Friebel_dataframe = pd.read_csv(folder1 + 'beta_oxy_Friebel.txt', sep = ' ')
-
-n_and_k_wat_Hale_dataframe = pd.read_csv(folder1 + 'n_and_k_wat_Hale.txt', sep = ' ')
-n_and_k_wat_Segelstein_dataframe = pd.read_csv(folder1 + 'n_and_k_wat_Segelstein.txt', sep = ' ')
-oxy_and_deo_Bosschaart_dataframe = pd.read_csv(folder1 + 'oxy_and_deo_Bosschaart.txt', sep = ' ')
-
-folder2 = folder0 + 'datasets\\colors\\'
-
-rspds_A_D50_D65_dataframe = pd.read_csv(folder2 + 'rspds_A_D50_D65.txt', sep = ' ')
-rspds_D55_D75_dataframe = pd.read_csv(folder2 + 'rspds_D55_D75.txt', sep = ' ')
-cmfs_dataframe = pd.read_csv(folder2 + 'cmfs.txt', sep = ' ')
-wps_dataframe = pd.read_csv(folder2 + 'wps.txt', sep = ' ')
-
-Lab_Alaluf2002_dataframe = pd.read_csv(folder2 + 'Lab_Alaluf2002.txt', sep = ' ')
-Lab_Xiao2017_dataframe = pd.read_csv(folder2 + 'Lab_Xiao2017.txt', sep = ' ')