singlebehaviorlab 2.3.3__tar.gz → 2.3.4__tar.gz

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Files changed (111) hide show
  1. {singlebehaviorlab-2.3.3/singlebehaviorlab.egg-info → singlebehaviorlab-2.3.4}/PKG-INFO +1 -1
  2. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/pyproject.toml +1 -1
  3. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4/singlebehaviorlab.egg-info}/PKG-INFO +1 -1
  4. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/videoprism_backend/videoprism/models.py +3 -3
  5. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/LICENSE +0 -0
  6. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/README.md +0 -0
  7. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/setup.cfg +0 -0
  8. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/__init__.py +0 -0
  9. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/__main__.py +0 -0
  10. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/_paths.py +0 -0
  11. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/backend/__init__.py +0 -0
  12. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/backend/augmentations.py +0 -0
  13. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/backend/clustering.py +0 -0
  14. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/backend/contrastive.py +0 -0
  15. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/backend/data_store.py +0 -0
  16. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/backend/embedding_refine.py +0 -0
  17. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/backend/inference.py +0 -0
  18. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/backend/model.py +0 -0
  19. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/backend/registration.py +0 -0
  20. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/backend/segmentation.py +0 -0
  21. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/backend/segments.py +0 -0
  22. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/backend/train.py +0 -0
  23. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/backend/training_runner.py +0 -0
  24. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/backend/uncertainty.py +0 -0
  25. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/backend/video_processor.py +0 -0
  26. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/backend/video_utils.py +0 -0
  27. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/cli.py +0 -0
  28. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/config.py +0 -0
  29. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/data/config/config.yaml +0 -0
  30. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/data/training_profiles.json +0 -0
  31. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/demo.py +0 -0
  32. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/gui/__init__.py +0 -0
  33. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/gui/analysis_widget.py +0 -0
  34. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/gui/attention_export.py +0 -0
  35. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/gui/clip_extraction_widget.py +0 -0
  36. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/gui/clustering_widget.py +0 -0
  37. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/gui/inference_popups.py +0 -0
  38. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/gui/inference_widget.py +0 -0
  39. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/gui/inference_worker.py +0 -0
  40. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/gui/interactive_timeline.py +0 -0
  41. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/gui/labeling_widget.py +0 -0
  42. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/gui/main_window.py +0 -0
  43. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/gui/metadata_management_widget.py +0 -0
  44. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/gui/motion_tracking.py +0 -0
  45. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/gui/overlay_export.py +0 -0
  46. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/gui/plot_integration.py +0 -0
  47. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/gui/qt_helpers.py +0 -0
  48. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/gui/registration_widget.py +0 -0
  49. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/gui/review_widget.py +0 -0
  50. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/gui/segmentation_tracking_widget.py +0 -0
  51. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/gui/tab_tutorial_dialog.py +0 -0
  52. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/gui/timeline_themes.py +0 -0
  53. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/gui/training_profiles.py +0 -0
  54. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/gui/training_widget.py +0 -0
  55. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/gui/video_utils.py +0 -0
  56. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/licenses/SAM2-LICENSE +0 -0
  57. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab/licenses/VideoPrism-LICENSE +0 -0
  58. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab.egg-info/SOURCES.txt +0 -0
  59. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab.egg-info/dependency_links.txt +0 -0
  60. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab.egg-info/entry_points.txt +0 -0
  61. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab.egg-info/requires.txt +0 -0
  62. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/singlebehaviorlab.egg-info/top_level.txt +0 -0
  63. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/tests/test_clustering_smoke.py +0 -0
  64. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/tests/test_config.py +0 -0
  65. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/tests/test_motion_tracking.py +0 -0
  66. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/tests/test_paths.py +0 -0
  67. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/tests/test_sam2_smoke.py +0 -0
  68. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/tests/test_segments.py +0 -0
  69. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/__init__.py +0 -0
  70. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/automatic_mask_generator.py +0 -0
  71. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/benchmark.py +0 -0
  72. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/build_sam.py +0 -0
  73. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/configs/sam2/sam2_hiera_b+.yaml +0 -0
  74. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/configs/sam2/sam2_hiera_l.yaml +0 -0
  75. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/configs/sam2/sam2_hiera_s.yaml +0 -0
  76. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/configs/sam2/sam2_hiera_t.yaml +0 -0
  77. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/configs/sam2.1/sam2.1_hiera_b+.yaml +0 -0
  78. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/configs/sam2.1/sam2.1_hiera_l.yaml +0 -0
  79. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/configs/sam2.1/sam2.1_hiera_s.yaml +0 -0
  80. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/configs/sam2.1/sam2.1_hiera_t.yaml +0 -0
  81. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/configs/sam2.1_training/sam2.1_hiera_b+_MOSE_finetune.yaml +0 -0
  82. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/modeling/__init__.py +0 -0
  83. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/modeling/backbones/__init__.py +0 -0
  84. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/modeling/backbones/hieradet.py +0 -0
  85. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/modeling/backbones/image_encoder.py +0 -0
  86. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/modeling/backbones/utils.py +0 -0
  87. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/modeling/memory_attention.py +0 -0
  88. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/modeling/memory_encoder.py +0 -0
  89. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/modeling/position_encoding.py +0 -0
  90. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/modeling/sam/__init__.py +0 -0
  91. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/modeling/sam/mask_decoder.py +0 -0
  92. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/modeling/sam/prompt_encoder.py +0 -0
  93. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/modeling/sam/transformer.py +0 -0
  94. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/modeling/sam2_base.py +0 -0
  95. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/modeling/sam2_utils.py +0 -0
  96. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/sam2_hiera_b+.yaml +0 -0
  97. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/sam2_hiera_l.yaml +0 -0
  98. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/sam2_hiera_s.yaml +0 -0
  99. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/sam2_hiera_t.yaml +0 -0
  100. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/sam2_image_predictor.py +0 -0
  101. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/sam2_video_predictor.py +0 -0
  102. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/sam2_video_predictor_legacy.py +0 -0
  103. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/utils/__init__.py +0 -0
  104. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/utils/amg.py +0 -0
  105. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/utils/misc.py +0 -0
  106. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/sam2_backend/sam2/utils/transforms.py +0 -0
  107. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/videoprism_backend/videoprism/__init__.py +0 -0
  108. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/videoprism_backend/videoprism/encoders.py +0 -0
  109. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/videoprism_backend/videoprism/layers.py +0 -0
  110. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/videoprism_backend/videoprism/tokenizers.py +0 -0
  111. {singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/videoprism_backend/videoprism/utils.py +0 -0
{singlebehaviorlab-2.3.3/singlebehaviorlab.egg-info → singlebehaviorlab-2.3.4}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: singlebehaviorlab
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- Version: 2.3.3
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+ Version: 2.3.4
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  Summary: Behavioral sequencing and phenotyping with lightweight task specific adaptation
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  Author: Almir Aljovic
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  Maintainer: Almir Aljovic
{singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/pyproject.toml RENAMED
@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
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  [project]
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  name = "singlebehaviorlab"
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- version = "2.3.3"
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+ version = "2.3.4"
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  description = "Behavioral sequencing and phenotyping with lightweight task specific adaptation"
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  readme = "README.md"
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  license = { file = "LICENSE" }
{singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4/singlebehaviorlab.egg-info}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: singlebehaviorlab
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- Version: 2.3.3
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+ Version: 2.3.4
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  Summary: Behavioral sequencing and phenotyping with lightweight task specific adaptation
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  Author: Almir Aljovic
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  Maintainer: Almir Aljovic
{singlebehaviorlab-2.3.3 → singlebehaviorlab-2.3.4}/third_party/videoprism_backend/videoprism/models.py RENAMED
@@ -45,7 +45,6 @@ import jax.numpy as jnp
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  import huggingface_hub
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  import numpy as np
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  from videoprism import encoders
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- from videoprism import tokenizers
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  from videoprism import utils
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  K400_NUM_CLASSES: int = 400
@@ -336,7 +335,8 @@ def load_pretrained_weights(
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  return jax.tree_util.tree_map(jnp.asarray, variables)
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- def load_text_tokenizer(name: str) -> tokenizers.Tokenizer:
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+ def load_text_tokenizer(name: str):
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+ from videoprism import tokenizers # lazy: avoids top-level TF dependency
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  """Loads a text tokenizer by name.
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  Args:
@@ -353,7 +353,7 @@ def load_text_tokenizer(name: str) -> tokenizers.Tokenizer:
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  def tokenize_texts(
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- tokenizer: tokenizers.Tokenizer,
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+ tokenizer,
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  inputs: Sequence[str],
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  max_length: int = TEXT_MAX_LEN,
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  add_bos: bool | None = None,