simba-uw-tf-dev 4.7.7__tar.gz → 4.7.9__tar.gz

{simba_uw_tf_dev-4.7.7 → simba_uw_tf_dev-4.7.9}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: simba_uw_tf_dev
-Version: 4.7.7
+Version: 4.7.9
 Summary: Toolkit for computer classification and analysis of behaviors in experimental animals
 Home-page: https://github.com/sgoldenlab/simba
 Author: Simon Nilsson, Jia Jie Choong, Sophia Hwang

{simba_uw_tf_dev-4.7.7 → simba_uw_tf_dev-4.7.9}/setup.py

@@ -29,7 +29,7 @@ with open(GPU_REQUIREMENTS_PATH, "r") as f:
 # Setup configuration
 setuptools.setup(
     name="simba_uw_tf_dev",
-    version="4.7.7",
+    version="4.7.9",
     author="Simon Nilsson, Jia Jie Choong, Sophia Hwang",
     author_email="sronilsson@gmail.com",
     description="Toolkit for computer classification and analysis of behaviors in experimental animals",

{simba_uw_tf_dev-4.7.7 → simba_uw_tf_dev-4.7.9}/simba/SimBA.py

@@ -231,7 +231,7 @@ try:
 except (ImportError, AttributeError):
     is_worker_process = False
 if not is_worker_process:
-    print(f'SimBA environment variables: {ENV}. Load time: {load_timer.elapsed_time_str}s')
+    print(f'SimBA environment variables: {ENV}. SimBA load time: {load_timer.elapsed_time_str}s')
 
 class LoadProjectPopUp(object):
     def __init__(self):

{simba_uw_tf_dev-4.7.7 → simba_uw_tf_dev-4.7.9}/simba/assets/lookups/tooptips.json

@@ -65,5 +65,36 @@
   "ANIMAL_COUNT": "Number of animals (tracks) in the videos. Used to name classes (e.g. animal_1, animal_2) in the YOLO dataset.",
   "sleap_remove_animal_ids": "If TRUE, merge all tracks into a single identity (animal_1). Use when animal IDs are not meaningful or for single-animal data.",
   "sleap_threshold": "Minimum SLEAP instance confidence (the instance.score column in the CSV). Only pose predictions with score ≥ this value are used when building the YOLO dataset. E.g. 90 means keep instances where instance.score ≥ 0.9; lower values include more frames but may add noisy predictions.",
-  "SLEAP_SLP_DATA_DIR": "Directory containing SLEAP .SLP project/annotation files. Each .SLP file is converted to YOLO pose format."
+  "SLEAP_SLP_DATA_DIR": "Directory containing SLEAP .SLP project/annotation files. Each .SLP file is converted to YOLO pose format.",
+  "BATCH_CLIP_START_TIME": "Start time for clipping all videos. Use HH:MM:SS (e.g. 00:00:10). Click APPLY to copy this value to every video row.",
+  "BATCH_CLIP_END_TIME": "End time for clipping all videos. Use HH:MM:SS (e.g. 00:01:30). Must be after start time. Click APPLY to copy this value to every video row.",
+  "BATCH_DOWNSAMPLE_WIDTH": "Output width in pixels when downsampling all videos. Must be even. Click APPLY to copy to every video row.",
+  "BATCH_DOWNSAMPLE_HEIGHT": "Output height in pixels when downsampling all videos. Must be even. Click APPLY to copy to every video row.",
+  "BATCH_FPS": "Target frames per second for all videos. Click APPLY to copy this value to every video row.",
+  "BATCH_APPLY_DOWNSAMPLE": "Tick to check the downsample box for all videos (all will be downsampled on execute). Untick to uncheck all. Set width and height in the DOWNSAMPLE VIDEOS panel, then click APPLY there to copy those values to every row.",
+  "BATCH_APPLY_FPS": "Tick to enable FPS change for all videos.\nUntick to disable for all.\nSet FPS in CHANGE FPS panel, then APPLY there.",
+  "BATCH_APPLY_GREYSCALE": "Tick to enable greyscale for all videos.\nUntick to disable for all.",
+  "BATCH_APPLY_FRAME_COUNT": "Tick to superimpose frame numbers on all videos.\nUntick to disable for all.",
+  "BATCH_APPLY_CLAHE": "Tick to apply CLAHE (contrast) to all videos.\nUntick to disable for all.",
+  "BATCH_APPLY_CLIP": "Tick to enable clipping for all videos.\nUntick to disable for all.\nSet start/end in CLIP VIDEOS SETTING, then APPLY there.",
+  "BLOB_THRESHOLD": "How strict the background subtraction is (1–100). Lower = more counts as animal; higher = only strong differences.\nClick APPLY to put this value in every video row.",
+  "BLOB_SMOOTHING_TIME": "Smooth the animal's position over time (seconds). Reduces jitter. None = no smoothing.\nClick APPLY to put this value in every video row.",
+  "BLOB_BUFFER": "Extra pixels drawn around the detected animal (padding).\nClick APPLY to put this value in every video row.",
+  "BLOB_GAP_FILL_SIZE": "Filter size (as % of frame) that fills small holes in the animal mask. Helps merge broken blobs. None = off.\nClick APPLY to put this value in every video row.",
+  "BLOB_NOISE_REMOVAL_SIZE": "Filter size (as % of frame) that removes small speckles from the mask. Reduces false detections. None = off.\nClick APPLY to put this value in every video row.",
+  "BLOB_VERTICE_COUNT": "Number of points used to describe the blob shape. Higher = more detailed outline.",
+  "BLOB_SAVE_BG_VIDEOS": "If on, save the background-subtracted videos to the output folder.",
+  "BLOB_GAP_FILL_ITERATIONS": "How many times to run the gap-fill filter. More = stronger filling.",
+  "BLOB_NOISE_REMOVAL_ITERATIONS": "How many times to run the noise-removal filter. More = stronger cleaning.",
+  "BLOB_DUPLICATE_INCLUSION": "Copy the inclusion zones you drew for one video to all others. Pick the source video, then click APPLY.",
+  "BLOB_BACKGROUND_DIRECTORY": "Folder with one background reference video per video to track. File names must match input videos.\nClick APPLY to fill the BACKGROUND REFERENCE column for all rows.",
+  "BLOB_HEADER_VIDEO_NAME": "Input video filename for this row.",
+  "BLOB_HEADER_BACKGROUND_REFERENCE": "Background reference video path for this video.",
+  "BLOB_HEADER_THRESHOLD": "Background subtraction strictness (1–100) for this video.",
+  "BLOB_HEADER_SMOOTHING_TIME": "Smoothing time (seconds) for this video. Reduces jitter.",
+  "BLOB_HEADER_BUFFER": "Padding (pixels) around the detected animal for this video.",
+  "BLOB_HEADER_GAP_FILL_SIZE": "Gap-fill filter size (% of frame) for this video.",
+  "BLOB_HEADER_NOISE_REMOVAL_SIZE": "Noise-removal filter size (% of frame) for this video.",
+  "BLOB_HEADER_INCLUSION_ZONES": "Draw regions where the animal must stay. Tracking is ignored outside these zones.",
+  "BLOB_HEADER_QUICK_CHECK": "Preview blob tracking for this video with current settings."
 }

{simba_uw_tf_dev-4.7.7 → simba_uw_tf_dev-4.7.9}/simba/third_party_label_appenders/transform/sleap_csv_to_yolo.py

@@ -19,10 +19,12 @@ from simba.utils.checks import (check_float, check_if_dir_exists, check_int,
                                 check_valid_dataframe, check_valid_tuple)
 from simba.utils.enums import Options
 from simba.utils.errors import NoFilesFoundError
-from simba.utils.printing import SimbaTimer, stdout_success, stdout_information
-from simba.utils.read_write import (create_directory,
+from simba.utils.printing import SimbaTimer, stdout_information, stdout_success
+from simba.utils.read_write import (clean_sleap_filenames_in_directory,
+                                    copy_files_to_directory, create_directory,
                                     find_files_of_filetypes_in_directory,
-                                    get_video_meta_data, read_frm_of_video, copy_files_to_directory, clean_sleap_filenames_in_directory, remove_a_folder)
+                                    get_video_meta_data, read_frm_of_video,
+                                    remove_a_folder)
 from simba.utils.yolo import keypoint_array_to_yolo_annotation_str
 
 

{simba_uw_tf_dev-4.7.7 → simba_uw_tf_dev-4.7.9}/simba/ui/blob_tracker_ui.py

@@ -26,7 +26,7 @@ from simba.utils.read_write import (find_all_videos_in_directory,
                                     find_core_cnt,
                                     find_files_of_filetypes_in_directory,
                                     get_video_meta_data, remove_files,
-                                    save_json, str_2_bool, write_pickle)
+                                    save_json, str_2_bool, write_pickle, read_frm_of_video)
 from simba.video_processors.blob_tracking_executor import BlobTrackingExecutor
 
 ABSOLUTE = 'absolute'
@@ -101,15 +101,15 @@ class BlobTrackingUI(PopUpMixin):
     def get_quick_settings(self):
         self.settings_frm = CreateLabelFrameWithIcon(parent=self.main_frm, header="SETTINGS", icon_name='settings', padx=15, pady=15)
         self.quick_settings_frm = CreateLabelFrameWithIcon(parent=self.settings_frm, header="QUICK SETTINGS", icon_name='clock', padx=15, pady=15, relief='solid')
-        self.quick_setting_threshold_dropdown = SimBADropDown(parent=self.quick_settings_frm, dropdown_options=list(range(1, 101)), label="THRESHOLD:", label_width=30, dropdown_width=10, value=DEFAULT_THRESHOLD, img='threshold')
+        self.quick_setting_threshold_dropdown = SimBADropDown(parent=self.quick_settings_frm, dropdown_options=list(range(1, 101)), label="THRESHOLD:", label_width=30, dropdown_width=10, value=DEFAULT_THRESHOLD, img='threshold', tooltip_key='BLOB_THRESHOLD')
         self.quick_setting_threshold_btn = SimbaButton(parent=self.quick_settings_frm, txt='APPLY', img='tick',cmd=self._set_threshold, cmd_kwargs={'threshold': lambda: self.quick_setting_threshold_dropdown.getChoices()})
-        self.set_smoothing_time_dropdown = SimBADropDown(parent=self.quick_settings_frm, dropdown_options=SMOOTHING_TIMES, label="SMOOTHING TIME (S):", label_width=30, dropdown_width=10, value=SMOOTHING_TIMES[0], img='smooth')
+        self.set_smoothing_time_dropdown = SimBADropDown(parent=self.quick_settings_frm, dropdown_options=SMOOTHING_TIMES, label="SMOOTHING TIME (S):", label_width=30, dropdown_width=10, value=SMOOTHING_TIMES[0], img='smooth', tooltip_key='BLOB_SMOOTHING_TIME')
         self.set_smoothing_time_btn = SimbaButton(parent=self.quick_settings_frm, txt='APPLY', img='tick', cmd=self._set_smoothing_time, cmd_kwargs={'time': lambda: self.set_smoothing_time_dropdown.getChoices()})
-        self.set_buffer_dropdown = SimBADropDown(parent=self.quick_settings_frm, dropdown_options=BUFFER_SIZES, label="BUFFER (PIXELS):", label_width=30, dropdown_width=10, value=BUFFER_SIZES[0], img='resize')
+        self.set_buffer_dropdown = SimBADropDown(parent=self.quick_settings_frm, dropdown_options=BUFFER_SIZES, label="BUFFER (PIXELS):", label_width=30, dropdown_width=10, value=BUFFER_SIZES[0], img='resize', tooltip_key='BLOB_BUFFER')
         self.set_buffer_btn = SimbaButton(parent=self.quick_settings_frm, txt='APPLY', img='tick', cmd=self._set_buffer_size, cmd_kwargs={'size': lambda: self.set_buffer_dropdown.getChoices()})
-        self.closing_kernal_size_dropdown = SimBADropDown(parent=self.quick_settings_frm, dropdown_options=KERNEL_SIZES, label="GAP FILL FILTER SIZE (%):", label_width=30, dropdown_width=10, value=BUFFER_SIZES[0], img='pct')
+        self.closing_kernal_size_dropdown = SimBADropDown(parent=self.quick_settings_frm, dropdown_options=KERNEL_SIZES, label="GAP FILL FILTER SIZE (%):", label_width=30, dropdown_width=10, value=BUFFER_SIZES[0], img='pct', tooltip_key='BLOB_GAP_FILL_SIZE')
         self.set_closing_kernel_btn = SimbaButton(parent=self.quick_settings_frm, txt='APPLY', img='tick', cmd=self._set_close_kernel_dropdown, cmd_kwargs={'size': lambda: self.closing_kernal_size_dropdown.getChoices()})
-        self.opening_kernal_size_dropdown = SimBADropDown(parent=self.quick_settings_frm, dropdown_options=KERNEL_SIZES, label="NOISE REMOVAL FILTER SIZE (%):", label_width=30, dropdown_width=10, value=BUFFER_SIZES[0], img='pct_2')
+        self.opening_kernal_size_dropdown = SimBADropDown(parent=self.quick_settings_frm, dropdown_options=KERNEL_SIZES, label="NOISE REMOVAL FILTER SIZE (%):", label_width=30, dropdown_width=10, value=BUFFER_SIZES[0], img='pct_2', tooltip_key='BLOB_NOISE_REMOVAL_SIZE')
         self.opening_kernel_btn = SimbaButton(parent=self.quick_settings_frm, txt='APPLY', img='tick', cmd=self._set_open_kernel_dropdown, cmd_kwargs={'size': lambda: self.opening_kernal_size_dropdown.getChoices()})
 
         self.settings_frm.grid(row=0, column=0, sticky=NW)
@@ -126,19 +126,17 @@ class BlobTrackingUI(PopUpMixin):
         self.opening_kernel_btn.grid(row=6, column=1, sticky=NW)
 
         self.run_time_settings_frm = CreateLabelFrameWithIcon(parent=self.settings_frm, header="RUN-TIME SETTINGS", icon_name='run', padx=15, pady=15, relief='solid')
-        self.bg_dir = FolderSelect(parent=self.run_time_settings_frm, folderDescription='BACKGROUND DIRECTORY:', lblwidth=30, initialdir=self.input_dir, lbl_icon='video_2')
+        self.bg_dir = FolderSelect(parent=self.run_time_settings_frm, folderDescription='BACKGROUND DIRECTORY:', lblwidth=30, initialdir=self.input_dir, lbl_icon='video_2', tooltip_key='BLOB_BACKGROUND_DIRECTORY')
         self.bg_dir_apply = SimbaButton(parent=self.run_time_settings_frm, txt='APPLY', img='tick',  cmd=self._apply_bg_dir, cmd_kwargs={'bg_dir': lambda: self.bg_dir.folder_path})
-        self.use_gpu_dropdown = SimBADropDown(parent=self.run_time_settings_frm, dropdown_options=['TRUE', 'FALSE'], label="USE GPU:", label_width=30, dropdown_width=10, value='FALSE', img='gpu_3')
-        #if not self.gpu_available: self.use_gpu_dropdown.disable()
-        #else: self.use_gpu_dropdown.set_value(value='TRUE')
+        self.use_gpu_dropdown = SimBADropDown(parent=self.run_time_settings_frm, dropdown_options=['TRUE', 'FALSE'], label="USE GPU:", label_width=30, dropdown_width=10, value='FALSE', img='gpu_3', tooltip_key='USE_GPU')
         self.use_gpu_dropdown.disable()
-        self.core_cnt_dropdown = SimBADropDown(parent=self.run_time_settings_frm, dropdown_options=list(range(1, self.core_cnt+1)), label="CPU CORE COUNT:", label_width=30, dropdown_width=10, value=int(self.core_cnt / 2), img='cpu_small')
+        self.core_cnt_dropdown = SimBADropDown(parent=self.run_time_settings_frm, dropdown_options=list(range(1, self.core_cnt+1)), label="CPU CORE COUNT:", label_width=30, dropdown_width=10, value=int(self.core_cnt / 2), img='cpu_small', tooltip_key='CORE_COUNT')
 
-        self.vertice_cnt_dropdown = SimBADropDown(parent=self.run_time_settings_frm, dropdown_options=list(range(10, 501)), label="VERTICE COUNT:", label_width=30, dropdown_width=10, value=30, img='polygon')
-        self.save_videos_dropdown = SimBADropDown(parent=self.run_time_settings_frm, dropdown_options=['TRUE', 'FALSE'], label="SAVE BACKGROUND VIDEOS:", label_width=30, dropdown_width=10, value='TRUE', img='save_small')
-        self.close_iterations_dropdown_dropdown = SimBADropDown(parent=self.run_time_settings_frm, dropdown_options=list(range(1, 20)), label="GAP FILLING ITERATIONS:", label_width=30, dropdown_width=10, value=3, img='abacus')
-        self.open_iterations_dropdown = SimBADropDown(parent=self.run_time_settings_frm, dropdown_options=list(range(1, 20)), label="NOISE REMOVAL ITERATIONS:", label_width=30, dropdown_width=10, value=3, img='abacus_2')
-        self.duplicate_inclusion_zones_dropdown = SimBADropDown(parent=self.run_time_settings_frm, dropdown_options=list(self.in_videos.keys()), label="DUPLICATE INCLUSION ZONES:", label_width=30, dropdown_width=self.len_max_char, value=list(self.in_videos.keys())[0], img='duplicate')
+        self.vertice_cnt_dropdown = SimBADropDown(parent=self.run_time_settings_frm, dropdown_options=list(range(10, 501)), label="VERTICE COUNT:", label_width=30, dropdown_width=10, value=30, img='polygon', tooltip_key='BLOB_VERTICE_COUNT')
+        self.save_videos_dropdown = SimBADropDown(parent=self.run_time_settings_frm, dropdown_options=['TRUE', 'FALSE'], label="SAVE BACKGROUND VIDEOS:", label_width=30, dropdown_width=10, value='TRUE', img='save_small', tooltip_key='BLOB_SAVE_BG_VIDEOS')
+        self.close_iterations_dropdown_dropdown = SimBADropDown(parent=self.run_time_settings_frm, dropdown_options=list(range(1, 20)), label="GAP FILLING ITERATIONS:", label_width=30, dropdown_width=10, value=3, img='abacus', tooltip_key='BLOB_GAP_FILL_ITERATIONS')
+        self.open_iterations_dropdown = SimBADropDown(parent=self.run_time_settings_frm, dropdown_options=list(range(1, 20)), label="NOISE REMOVAL ITERATIONS:", label_width=30, dropdown_width=10, value=3, img='abacus_2', tooltip_key='BLOB_NOISE_REMOVAL_ITERATIONS')
+        self.duplicate_inclusion_zones_dropdown = SimBADropDown(parent=self.run_time_settings_frm, dropdown_options=list(self.in_videos.keys()), label="DUPLICATE INCLUSION ZONES:", label_width=30, dropdown_width=self.len_max_char, value=list(self.in_videos.keys())[0], img='duplicate', tooltip_key='BLOB_DUPLICATE_INCLUSION')
         self.duplicate_inclusion_zones_btn = SimbaButton(parent=self.run_time_settings_frm, txt='APPLY', img='tick', cmd=self._duplicate_inclusion_zones, cmd_kwargs={'video_name': lambda: self.duplicate_inclusion_zones_dropdown.getChoices()})
         self.run_time_settings_frm.grid(row=0, column=1, sticky=NW, padx=(0, 15))
 
@@ -162,16 +160,16 @@ class BlobTrackingUI(PopUpMixin):
     def get_main_table(self):
         self.headings = {}
         self.videos_frm = CreateLabelFrameWithIcon(parent=self.main_frm, header="VIDEOS", icon_name='video', pady=5, padx=15, relief='solid')
-        self.headings['video_name'] = SimBALabel(parent=self.videos_frm, txt='VIDEO NAME', width=self.len_max_char, font=Formats.FONT_HEADER.value)
+        self.headings['video_name'] = SimBALabel(parent=self.videos_frm, txt='VIDEO NAME', width=self.len_max_char, font=Formats.FONT_HEADER.value, tooltip_key='BLOB_HEADER_VIDEO_NAME')
         self.headings['vertical_seperator'] = SimBASeperator(parent=self.videos_frm, color='black', orient='vertical', relief='flat')
-        self.headings['bg_path'] = SimBALabel(parent=self.videos_frm, txt='BACKGROUND \n REFERENCE', font=Formats.FONT_HEADER.value, justify='center', img='video_2')
-        self.headings['threshold'] = SimBALabel(parent=self.videos_frm, txt='THRESHOLD', font=Formats.FONT_HEADER.value, justify='center', img='threshold')
-        self.headings['inclusion_zones'] = SimBALabel(parent=self.videos_frm, txt='INCLUSION \n ZONES', font=Formats.FONT_HEADER.value, img='shapes_small')
-        self.headings['smoothing_time'] = SimBALabel(parent=self.videos_frm, txt='SMOOTHING \n TIME (S)', font=Formats.FONT_HEADER.value, img='smooth', justify='center')
-        self.headings['buffer_size'] = SimBALabel(parent=self.videos_frm, txt='BUFFER \n SIZE (PX)', font=Formats.FONT_HEADER.value, img='resize')
-        self.headings['closing_kernel_size'] = SimBALabel(parent=self.videos_frm, txt='GAP FILL \n SIZE (%)', font=Formats.FONT_HEADER.value, img='pct')
-        self.headings['opening_kernel_size'] = SimBALabel(parent=self.videos_frm, txt='NOISE \n FILL SIZE (%)', font=Formats.FONT_HEADER.value, img='pct_2')
-        self.headings['quick_check'] = SimBALabel(parent=self.videos_frm, txt='QUICK \n CHECK', font=Formats.FONT_HEADER.value, img='eye')
+        self.headings['bg_path'] = SimBALabel(parent=self.videos_frm, txt='BACKGROUND \n REFERENCE', font=Formats.FONT_HEADER.value, justify='center', img='video_2', tooltip_key='BLOB_HEADER_BACKGROUND_REFERENCE')
+        self.headings['threshold'] = SimBALabel(parent=self.videos_frm, txt='THRESHOLD', font=Formats.FONT_HEADER.value, justify='center', img='threshold', tooltip_key='BLOB_HEADER_THRESHOLD')
+        self.headings['inclusion_zones'] = SimBALabel(parent=self.videos_frm, txt='INCLUSION \n ZONES', font=Formats.FONT_HEADER.value, img='shapes_small', tooltip_key='BLOB_HEADER_INCLUSION_ZONES')
+        self.headings['smoothing_time'] = SimBALabel(parent=self.videos_frm, txt='SMOOTHING \n TIME (S)', font=Formats.FONT_HEADER.value, img='smooth', justify='center', tooltip_key='BLOB_HEADER_SMOOTHING_TIME')
+        self.headings['buffer_size'] = SimBALabel(parent=self.videos_frm, txt='BUFFER \n SIZE (PX)', font=Formats.FONT_HEADER.value, img='resize', tooltip_key='BLOB_HEADER_BUFFER')
+        self.headings['closing_kernel_size'] = SimBALabel(parent=self.videos_frm, txt='GAP FILL \n SIZE (%)', font=Formats.FONT_HEADER.value, img='pct', tooltip_key='BLOB_HEADER_GAP_FILL_SIZE')
+        self.headings['opening_kernel_size'] = SimBALabel(parent=self.videos_frm, txt='NOISE \n FILL SIZE (%)', font=Formats.FONT_HEADER.value, img='pct_2', tooltip_key='BLOB_HEADER_NOISE_REMOVAL_SIZE')
+        self.headings['quick_check'] = SimBALabel(parent=self.videos_frm, txt='QUICK \n CHECK', font=Formats.FONT_HEADER.value, img='eye', tooltip_key='BLOB_HEADER_QUICK_CHECK')
         col_cnt = 0
         for k, v in self.headings.items():
             if k == 'vertical_seperator':
@@ -190,7 +188,8 @@ class BlobTrackingUI(PopUpMixin):
         for video_cnt, (video_name, video_path) in enumerate(self.in_videos.items()):
             row_cnt = video_cnt * 2 + 2
             self.videos[video_name] = {}
-            self.videos[video_name]['name_lbl'] = SimBALabel(parent=self.videos_frm, txt=video_name, width=self.len_max_char, font=Formats.FONT_HEADER.value)
+            img = read_frm_of_video(video_path=video_path, frame_index=0, size=(420, 280), keep_aspect_ratio=True, raise_error=False)
+            self.videos[video_name]['name_lbl'] = SimBALabel(parent=self.videos_frm, txt=video_name, width=self.len_max_char, font=Formats.FONT_HEADER.value, hover_img=img)
             self.videos[video_name]["threshold_dropdown"] = SimBADropDown(parent=self.videos_frm, dropdown_options=list(range(1, 100)), label="", label_width=0, dropdown_width=15, value=DEFAULT_THRESHOLD)
             self.videos[video_name]["inclusion_btn"] = SimbaButton(parent=self.videos_frm, txt="SET INCLUSION ZONES", cmd=lambda k=self.videos[video_name]['name_lbl']["text"]: self._launch_set_inclusion_zones(k), img='shapes_small')
             self.videos[video_name]["bg_file"] = FileSelect(parent=self.videos_frm, width=25)

{simba_uw_tf_dev-4.7.7 → simba_uw_tf_dev-4.7.9}/simba/ui/pop_ups/batch_preprocess_pop_up.py

@@ -20,8 +20,8 @@ class BatchPreProcessPopUp(PopUpMixin):
     def __init__(self):
         PopUpMixin.__init__(self, title="BATCH PROCESS VIDEO", size=(600, 400), icon='stack')
         selections_frm = CreateLabelFrameWithIcon(parent=self.main_frm, header="SELECTIONS", icon_name=Keys.DOCUMENTATION.value, icon_link=Links.BATCH_PREPROCESS.value,)
-        self.input_folder_select = FolderSelect(selections_frm, "INPUT VIDEO DIRECTORY:", title="Select Folder with Input Videos", lblwidth=30, lbl_icon='folder')
-        self.output_folder_select = FolderSelect(selections_frm, "OUTPUT VIDEO DIRECTORY:", title="Select Folder for Output videos", lblwidth=30, lbl_icon='folder_2')
+        self.input_folder_select = FolderSelect(selections_frm, "INPUT VIDEO DIRECTORY:", title="Select Folder with Input Videos", lblwidth=30, lbl_icon='folder_video', tooltip_key='VIDEO_DIR')
+        self.output_folder_select = FolderSelect(selections_frm, "OUTPUT VIDEO DIRECTORY:", title="Select Folder for Output videos", lblwidth=30, lbl_icon='folder_2', tooltip_key='SAVE_DIR')
 
         confirm_btn = SimbaButton(parent=selections_frm, txt="CONFIRM", img='tick', txt_clr='blue', font=Formats.FONT_REGULAR.value, cmd=self.run)
         selections_frm.grid(row=0, column=0, sticky=NW)

{simba_uw_tf_dev-4.7.7 → simba_uw_tf_dev-4.7.9}/simba/ui/pop_ups/initialize_blob_tracking_pop_up.py

@@ -19,8 +19,8 @@ class InitializeBlobTrackerPopUp(PopUpMixin):
     def __init__(self):
         super().__init__(title="BLOB TRACKER: SELECT INPUT AND OUTPUT DIRECTORIES", size=(500, 500), icon='bubble_green')
         settings_frm = CreateLabelFrameWithIcon(parent=self.main_frm, header="DATA DIRECTORY SETTINGS", icon_name='settings')
-        self.input_dir_select = FolderSelect(parent=settings_frm, folderDescription= 'INPUT VIDEO DIRECTORY:', lblwidth=30, entry_width=20, lbl_icon='folder', tooltip_key='VIDEO_DIR')
-        self.save_dir_select = FolderSelect(parent=settings_frm, folderDescription='SAVE DATA DIRECTORY:', lblwidth=30, entry_width=20, lbl_icon='folder', tooltip_key='SAVE_DIR')
+        self.input_dir_select = FolderSelect(parent=settings_frm, folderDescription= 'INPUT VIDEO DIRECTORY:', lblwidth=30, entry_width=20, lbl_icon='folder_video', tooltip_key='VIDEO_DIR')
+        self.save_dir_select = FolderSelect(parent=settings_frm, folderDescription='SAVE DATA DIRECTORY:', lblwidth=30, entry_width=20, lbl_icon='folder_2', tooltip_key='SAVE_DIR')
         self.create_run_frm(run_function=self.run)
         settings_frm.grid(row=0, column=0, sticky=NW)
         self.input_dir_select.grid(row=0, column=0, sticky=NW)

{simba_uw_tf_dev-4.7.7 → simba_uw_tf_dev-4.7.9}/simba/ui/pop_ups/video_processing_pop_up.py

@@ -50,7 +50,7 @@ from simba.utils.read_write import (
     check_if_hhmmss_timestamp_is_valid_part_of_video,
     concatenate_videos_in_folder, find_all_videos_in_directory, find_core_cnt,
     find_files_of_filetypes_in_directory, find_video_of_file, get_fn_ext,
-    get_video_meta_data, seconds_to_timestamp, str_2_bool,
+    get_video_meta_data, read_frm_of_video, seconds_to_timestamp, str_2_bool,
     timestamp_to_seconds)
 from simba.utils.warnings import FrameRangeWarning
 from simba.video_processors.brightness_contrast_ui import BrightnessContrastUI
@@ -1590,7 +1590,6 @@ class ClipMultipleVideosByFrameNumbersPopUp(PopUpMixin):
         check_if_dir_exists(in_dir=data_dir, source=self.__class__.__name__, create_if_not_exist=False )
         check_if_dir_exists(in_dir=save_dir, source=self.__class__.__name__, create_if_not_exist=True)
         self.video_paths = find_all_videos_in_directory(directory=data_dir, as_dict=True, raise_error=True)
-        print(self.video_paths)
         self.video_meta_data = [get_video_meta_data(video_path=x)["frame_count"]for x in list(self.video_paths.values())]
         max_video_name_len = len(max(list(self.video_paths.keys())))
         super().__init__(title="CLIP MULTIPLE VIDEOS BY FRAME NUMBERS", icon='clip')
@@ -1606,9 +1605,10 @@ class ClipMultipleVideosByFrameNumbersPopUp(PopUpMixin):
         seperator.grid(row=1, column=0, columnspan=5, rowspan=1, sticky="ew")
 
         self.entry_boxes, self.interactive_btns = {}, {}
-        for cnt, video_name in enumerate(self.video_paths.keys()):
+        for cnt, (video_name, video_path) in enumerate(self.video_paths.items()):
             self.entry_boxes[video_name] = {}
-            SimBALabel(parent=data_frm, font=Formats.FONT_REGULAR.value, txt=video_name + f' (frames: { self.video_meta_data[cnt]})', justify='left').grid(row=cnt + 2, column=0, padx=padx, sticky=NW)
+            img = read_frm_of_video(video_path=video_path, frame_index=0, size=(420, 280), keep_aspect_ratio=True, raise_error=False)
+            SimBALabel(parent=data_frm, font=Formats.FONT_REGULAR_BOLD.value, txt=video_name + f' (frames: { self.video_meta_data[cnt]})', justify='left', hover_img=img).grid(row=cnt + 2, column=0, padx=padx, sticky=NW)
             self.entry_boxes[video_name]["start"] = Entry_Box(data_frm, fileDescription="", labelwidth=0, validation="numeric", justify='center')
             self.entry_boxes[video_name]["end"] = Entry_Box(data_frm, fileDescription="", labelwidth=0, validation="numeric", justify='center')
             self.entry_boxes[video_name]["start"].grid(row=cnt + 2, column=2, sticky=NW, padx=padx)
@@ -1732,7 +1732,7 @@ class InitiateClipMultipleVideosByFrameNumbersPopUp(PopUpMixin):
             icon_link=Links.VIDEO_TOOLS.value,
         )
         self.input_folder = FolderSelect(
-            data_frm, "VIDEO DIRECTORY:", title="Select Folder with videos", lblwidth=30, lbl_icon='folder'
+            data_frm, "VIDEO DIRECTORY:", title="Select Folder with videos", lblwidth=30, lbl_icon='folder_video'
         )
         self.output_folder = FolderSelect(
             data_frm,
@@ -1814,9 +1814,10 @@ class ClipMultipleVideosByTimestamps(PopUpMixin):
         seperator.grid(row=1, column=0, columnspan=5, rowspan=1, sticky="ew")
 
         self.entry_boxes, self.interactive_btns = {}, {}
-        for cnt, video_name in enumerate(self.video_paths.keys()):
+        for cnt, (video_name, video_path) in enumerate(self.video_paths.items()):
             self.entry_boxes[video_name] = {}
-            SimBALabel(parent=data_frm, txt=video_name, justify='center').grid(row=cnt + 2, column=0, sticky=NW, padx=padx)
+            img = read_frm_of_video(video_path=video_path, frame_index=0, size=(420, 280), keep_aspect_ratio=True, raise_error=False)
+            SimBALabel(parent=data_frm, txt=video_name, justify='center', hover_img=img, font=Formats.FONT_REGULAR_BOLD.value).grid(row=cnt + 2, column=0, sticky=NW, padx=padx)
             video_length = self.video_meta_data[cnt]["video_length_s"]
             video_length_hhmmss = seconds_to_timestamp(seconds=video_length)
             SimBALabel(data_frm, txt=video_length_hhmmss, justify='center').grid(row=cnt + 2, column=1, sticky=NW, padx=padx)

{simba_uw_tf_dev-4.7.7 → simba_uw_tf_dev-4.7.9}/simba/ui/pop_ups/yolo_pose_train_popup.py

@@ -1,6 +1,6 @@
 import os
-import sys
 import subprocess
+import sys
 import tempfile
 from tkinter import *
 from tkinter import messagebox