siibra 0.4a88__tar.gz → 0.4a90__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Potentially problematic release.
This version of siibra might be problematic. Click here for more details.
- {siibra-0.4a88/siibra.egg-info → siibra-0.4a90}/PKG-INFO +1 -1
- siibra-0.4a90/siibra/VERSION +1 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/features/feature.py +4 -1
- {siibra-0.4a88 → siibra-0.4a90}/siibra/locations/location.py +2 -1
- {siibra-0.4a88 → siibra-0.4a90/siibra.egg-info}/PKG-INFO +1 -1
- siibra-0.4a88/siibra/VERSION +0 -1
- {siibra-0.4a88 → siibra-0.4a90}/LICENSE +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/MANIFEST.in +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/README.rst +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/setup.cfg +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/setup.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/__init__.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/commons.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/configuration/__init__.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/configuration/configuration.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/configuration/factory.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/core/__init__.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/core/atlas.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/core/concept.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/core/parcellation.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/core/region.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/core/relation_qualification.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/core/space.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/explorer/__init__.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/explorer/url.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/explorer/util.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/features/__init__.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/features/anchor.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/features/connectivity/__init__.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/features/connectivity/functional_connectivity.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/features/connectivity/regional_connectivity.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/features/connectivity/streamline_counts.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/features/connectivity/streamline_lengths.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/features/connectivity/tracing_connectivity.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/features/dataset/__init__.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/features/dataset/ebrains.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/features/image/__init__.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/features/image/image.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/features/image/sections.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/features/image/volume_of_interest.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/features/tabular/__init__.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/features/tabular/bigbrain_intensity_profile.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/features/tabular/cell_density_profile.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/features/tabular/cortical_profile.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/features/tabular/gene_expression.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/features/tabular/layerwise_bigbrain_intensities.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/features/tabular/layerwise_cell_density.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/features/tabular/receptor_density_fingerprint.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/features/tabular/receptor_density_profile.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/features/tabular/regional_timeseries_activity.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/features/tabular/tabular.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/livequeries/__init__.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/livequeries/allen.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/livequeries/bigbrain.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/livequeries/ebrains.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/livequeries/query.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/locations/__init__.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/locations/boundingbox.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/locations/point.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/locations/pointset.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/retrieval/__init__.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/retrieval/cache.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/retrieval/datasets.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/retrieval/exceptions/__init__.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/retrieval/repositories.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/retrieval/requests.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/vocabularies/__init__.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/vocabularies/gene_names.json +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/vocabularies/receptor_symbols.json +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/vocabularies/region_aliases.json +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/volumes/__init__.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/volumes/gifti.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/volumes/neuroglancer.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/volumes/nifti.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/volumes/parcellationmap.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/volumes/sparsemap.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra/volumes/volume.py +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra.egg-info/SOURCES.txt +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra.egg-info/dependency_links.txt +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra.egg-info/requires.txt +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/siibra.egg-info/top_level.txt +0 -0
- {siibra-0.4a88 → siibra-0.4a90}/test/test_siibra.py +0 -0
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
Metadata-Version: 2.4
|
|
2
2
|
Name: siibra
|
|
3
|
-
Version: 0.
|
|
3
|
+
Version: 0.4a90
|
|
4
4
|
Summary: siibra - Software interfaces for interacting with brain atlases
|
|
5
5
|
Home-page: https://github.com/FZJ-INM1-BDA/siibra-python
|
|
6
6
|
Author: Big Data Analytics Group, Forschungszentrum Juelich, Institute of Neuroscience and Medicine (INM-1)
|
|
@@ -0,0 +1 @@
|
|
|
1
|
+
0.4a90
|
|
@@ -219,7 +219,10 @@ class Feature:
|
|
|
219
219
|
from ..configuration.configuration import Configuration
|
|
220
220
|
conf = Configuration()
|
|
221
221
|
Configuration.register_cleanup(cls.clean_instances)
|
|
222
|
-
|
|
222
|
+
if cls._configuration_folder not in conf.folders:
|
|
223
|
+
logger.debug(f"{cls._configuration_folder} is not in current configuration")
|
|
224
|
+
return []
|
|
225
|
+
|
|
223
226
|
cls._preconfigured_instances = [
|
|
224
227
|
o for o in conf.build_objects(cls._configuration_folder)
|
|
225
228
|
if isinstance(o, cls)
|
|
@@ -26,7 +26,8 @@ class Location(ABC):
|
|
|
26
26
|
"""
|
|
27
27
|
|
|
28
28
|
# backend for transforming coordinates between spaces
|
|
29
|
-
|
|
29
|
+
# for detail, see https://github.com/HumanBrainProject/hbp-spatial-backend
|
|
30
|
+
SPACEWARP_SERVER = "https://siibra-spatial-backend.apps.ebrains.eu/v1"
|
|
30
31
|
|
|
31
32
|
# lookup of space identifiers to be used by SPACEWARP_SERVER
|
|
32
33
|
SPACEWARP_IDS = {
|
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
Metadata-Version: 2.4
|
|
2
2
|
Name: siibra
|
|
3
|
-
Version: 0.
|
|
3
|
+
Version: 0.4a90
|
|
4
4
|
Summary: siibra - Software interfaces for interacting with brain atlases
|
|
5
5
|
Home-page: https://github.com/FZJ-INM1-BDA/siibra-python
|
|
6
6
|
Author: Big Data Analytics Group, Forschungszentrum Juelich, Institute of Neuroscience and Medicine (INM-1)
|
siibra-0.4a88/siibra/VERSION
DELETED
|
@@ -1 +0,0 @@
|
|
|
1
|
-
0.4a88
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|