signaloid 2.0.0__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- signaloid-2.0.0/LICENSE +19 -0
- signaloid-2.0.0/PKG-INFO +130 -0
- signaloid-2.0.0/README.md +101 -0
- signaloid-2.0.0/pyproject.toml +79 -0
- signaloid-2.0.0/src/signaloid/circuitpython/README.md +3 -0
- signaloid-2.0.0/src/signaloid/circuitpython/__init__.py +0 -0
- signaloid-2.0.0/src/signaloid/circuitpython/extended_ulab_numpy.py +397 -0
- signaloid-2.0.0/src/signaloid/circuitpython/plot_wrapper.py +562 -0
- signaloid-2.0.0/src/signaloid/circuitpython/py.typed +0 -0
- signaloid-2.0.0/src/signaloid/distributional/README.md +2 -0
- signaloid-2.0.0/src/signaloid/distributional/__init__.py +4 -0
- signaloid-2.0.0/src/signaloid/distributional/dirac_delta.py +238 -0
- signaloid-2.0.0/src/signaloid/distributional/dirac_delta_test.py +116 -0
- signaloid-2.0.0/src/signaloid/distributional/distributional.py +1325 -0
- signaloid-2.0.0/src/signaloid/distributional/distributional_test.py +1376 -0
- signaloid-2.0.0/src/signaloid/distributional/py.typed +0 -0
- signaloid-2.0.0/src/signaloid/distributional/test_ux_value_pairs.csv +786 -0
- signaloid-2.0.0/src/signaloid/distributional_distance/README.md +145 -0
- signaloid-2.0.0/src/signaloid/distributional_distance/__init__.py +68 -0
- signaloid-2.0.0/src/signaloid/distributional_distance/_validators.py +93 -0
- signaloid-2.0.0/src/signaloid/distributional_distance/_validators_test.py +195 -0
- signaloid-2.0.0/src/signaloid/distributional_distance/binned_wasserstein.py +531 -0
- signaloid-2.0.0/src/signaloid/distributional_distance/binned_wasserstein_test.py +588 -0
- signaloid-2.0.0/src/signaloid/distributional_distance/ks_distance.py +108 -0
- signaloid-2.0.0/src/signaloid/distributional_distance/ks_distance_test.py +286 -0
- signaloid-2.0.0/src/signaloid/distributional_distance/py.typed +0 -0
- signaloid-2.0.0/src/signaloid/distributional_distance/scalar.py +219 -0
- signaloid-2.0.0/src/signaloid/distributional_distance/scalar_test.py +294 -0
- signaloid-2.0.0/src/signaloid/distributional_distance/wasserstein.py +484 -0
- signaloid-2.0.0/src/signaloid/distributional_distance/wasserstein_test.py +667 -0
- signaloid-2.0.0/src/signaloid/distributional_information_plotting/README.md +99 -0
- signaloid-2.0.0/src/signaloid/distributional_information_plotting/__init__.py +0 -0
- signaloid-2.0.0/src/signaloid/distributional_information_plotting/invalid_ttr_ux_string.dat +1 -0
- signaloid-2.0.0/src/signaloid/distributional_information_plotting/plot_histogram_dirac_deltas.py +1015 -0
- signaloid-2.0.0/src/signaloid/distributional_information_plotting/plot_histogram_dirac_deltas_test.py +962 -0
- signaloid-2.0.0/src/signaloid/distributional_information_plotting/plot_wrapper.py +272 -0
- signaloid-2.0.0/src/signaloid/distributional_information_plotting/plot_wrapper_test.py +164 -0
- signaloid-2.0.0/src/signaloid/distributional_information_plotting/py.typed +0 -0
- signaloid-2.0.0/src/signaloid/distributional_information_plotting/sample_generator.py +232 -0
- signaloid-2.0.0/src/signaloid/distributional_information_plotting/sample_generator_test.py +163 -0
- signaloid-2.0.0/src/signaloid/statistical_tests/README.md +85 -0
- signaloid-2.0.0/src/signaloid/statistical_tests/__init__.py +31 -0
- signaloid-2.0.0/src/signaloid/statistical_tests/ks_hypothesis.py +257 -0
- signaloid-2.0.0/src/signaloid/statistical_tests/ks_hypothesis_test.py +257 -0
- signaloid-2.0.0/src/signaloid/statistical_tests/py.typed +0 -0
- signaloid-2.0.0/src/signaloid/uxdata_toolkit/__init__.py +285 -0
- signaloid-2.0.0/src/signaloid/uxdata_toolkit/__main__.py +30 -0
- signaloid-2.0.0/src/signaloid/uxdata_toolkit/py.typed +0 -0
- signaloid-2.0.0/src/signaloid/uxdata_toolkit/uxdata_toolkit_test.py +383 -0
signaloid-2.0.0/LICENSE
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Copyright (c) 2024, Signaloid.
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Permission is hereby granted, free of charge, to any person obtaining a copy
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of this software and associated documentation files (the "Software"), to deal
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in the Software without restriction, including without limitation the rights
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to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
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copies of the Software, and to permit persons to whom the Software is
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furnished to do so, subject to the following conditions:
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The above copyright notice and this permission notice shall be included in all
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copies or substantial portions of the Software.
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THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
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IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
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FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
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AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
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LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
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OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
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SOFTWARE.
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signaloid-2.0.0/PKG-INFO
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Metadata-Version: 2.4
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Name: signaloid
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Version: 2.0.0
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Summary: Signaloid Data Toolkit for interacting with Signaloid's UxHw®.
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License: MIT
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License-File: LICENSE
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Author: Signaloid
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Author-email: info@signaloid.com
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Requires-Python: >=3.11,<4
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Classifier: License :: OSI Approved :: MIT License
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Classifier: Programming Language :: Python :: 3
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Classifier: Programming Language :: Python :: 3.11
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Classifier: Programming Language :: Python :: 3.12
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Classifier: Programming Language :: Python :: 3.13
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Classifier: Programming Language :: Python :: 3.14
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Classifier: Programming Language :: Python :: 3.15
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Requires-Dist: matplotlib (>=3.10.0) ; python_version >= "3.11" and python_version < "3.14"
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Requires-Dist: matplotlib (>=3.10.5) ; python_version >= "3.11" and python_version < "3.15"
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Requires-Dist: matplotlib (>=3.9.0) ; python_version >= "3.11" and python_version < "3.13"
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Requires-Dist: numpy (>=2.0.0) ; python_version >= "3.11" and python_version < "3.13"
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Requires-Dist: numpy (>=2.1.0) ; python_version >= "3.11" and python_version < "3.14"
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Requires-Dist: numpy (>=2.4.1) ; python_version >= "3.11" and python_version < "3.15"
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Requires-Dist: pillow (>=13.0.0)
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Requires-Dist: scipy (>=1.14.0)
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Project-URL: Homepage, https://signaloid.com
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Project-URL: Repository, https://github.com/signaloid/signaloid-data-toolkit
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Description-Content-Type: text/markdown
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# Signaloid Data Toolkit
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The Signaloid Data Toolkit provides tools for interacting with
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applications that utilize Signaloid's UxHw® technology for distributional
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arithmetic. Use the library to analyze Ux Data values from the application.
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The tools for benchmarking applications against equivalent Monte Carlo
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methods build on this library and live in the separate
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[signaloid-benchmarking](https://github.com/signaloid/signaloid-benchmarking)
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repository.
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<picture>
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<source media="(prefers-color-scheme: dark)" srcset="https://raw.githubusercontent.com/signaloid/signaloid-data-toolkit/main/images/signaloid-external-illustration-signaloid-data-toolkit-diagram-flat-dark-withCR.png">
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<img alt="signaloid-data-toolkit diagram" src="https://raw.githubusercontent.com/signaloid/signaloid-data-toolkit/main/images/signaloid-external-illustration-signaloid-data-toolkit-diagram-flat-light-withCR.png">
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</picture>
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## Requirements
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The Signaloid Data Toolkit requires Python 3.11 or later. See
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`pyproject.toml` for the full list of dependencies.
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## Installation
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Install the `signaloid` package via pip (recommended):
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```bash
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python -m pip install signaloid
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```
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Install the latest version from the GitHub repository:
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```bash
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python -m pip install git+https://github.com/signaloid/signaloid-data-toolkit
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```
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Alternatively, clone this repository and install from source with:
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```bash
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python -m pip install .
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```
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## Usage
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### Parsing Ux Data
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Construct `DistributionalValue` Python objects by parsing
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[Ux Data](https://docs.signaloid.io/docs/uxhw-api/ux-data-format/) in
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Ux-string or Ux Binary format.
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```python
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from signaloid.distributional.distributional import DistributionalValue
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# Intermediate code which writes to ux_string and ux_binary_buffer
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# ...
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# Parse a Ux-string
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dist_value = DistributionalValue.parse(ux_string)
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# Parse a Ux Binary buffer
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dist_value = DistributionalValue.parse(ux_binary_buffer)
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```
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### Create Distribution Plots
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Create plots to visualize distributional information by using the
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[`plot` function](https://github.com/signaloid/signaloid-data-toolkit/blob/main/src/signaloid/distributional_information_plotting/plot_wrapper.py)
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with a `PlotData` object built from a `DistributionalValue` containing Ux Data.
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The `plot` function is a wrapper function for the `PlotHistogramDiracDeltas`
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class for plotting a distributional value as a histogram with variable bin
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widths.
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```python
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from signaloid.distributional.distributional import DistributionalValue
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from signaloid.distributional_information_plotting.plot_histogram_dirac_deltas import PlotData
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from signaloid.distributional_information_plotting.plot_wrapper import plot
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# Intermediate code which writes to ux_string
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# ...
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# Create distributional value object from Ux-string
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dist_value = DistributionalValue.parse(ux_string)
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plot(PlotData(dist_value))
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```
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For plotting from raw samples, saving to a file, and the other `plot` options,
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see the package [README.md](https://github.com/signaloid/signaloid-data-toolkit/blob/main/src/signaloid/distributional_information_plotting/README.md).
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### Sample from Ux Data
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Draw random samples from a distributional value with the
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[`sample_generator` function](https://github.com/signaloid/signaloid-data-toolkit/blob/main/src/signaloid/distributional_information_plotting/sample_generator.py).
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Samples of the finite part of the distribution are drawn by inverse transform
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sampling of the binned distribution. Distributions that also carry non-finite
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mass (`NaN`, `-Inf`, `+Inf`) are sampled as a mixture, with each sample drawn
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from the finite or the non-finite part in proportion to their masses.
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```python
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from signaloid.distributional_information_plotting.sample_generator import sample_generator
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# Intermediate code which writes to ux_string
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# ...
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samples = sample_generator(ux_string, n_samples=1000)
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```
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To sample from a `DistributionalValue` that is already parsed, use
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`sample_from_distributional_value` from the same module.
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# Signaloid Data Toolkit
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The Signaloid Data Toolkit provides tools for interacting with
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applications that utilize Signaloid's UxHw® technology for distributional
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arithmetic. Use the library to analyze Ux Data values from the application.
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The tools for benchmarking applications against equivalent Monte Carlo
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methods build on this library and live in the separate
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[signaloid-benchmarking](https://github.com/signaloid/signaloid-benchmarking)
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repository.
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<picture>
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<source media="(prefers-color-scheme: dark)" srcset="https://raw.githubusercontent.com/signaloid/signaloid-data-toolkit/main/images/signaloid-external-illustration-signaloid-data-toolkit-diagram-flat-dark-withCR.png">
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<img alt="signaloid-data-toolkit diagram" src="https://raw.githubusercontent.com/signaloid/signaloid-data-toolkit/main/images/signaloid-external-illustration-signaloid-data-toolkit-diagram-flat-light-withCR.png">
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</picture>
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## Requirements
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The Signaloid Data Toolkit requires Python 3.11 or later. See
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`pyproject.toml` for the full list of dependencies.
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## Installation
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Install the `signaloid` package via pip (recommended):
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```bash
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python -m pip install signaloid
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```
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Install the latest version from the GitHub repository:
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```bash
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python -m pip install git+https://github.com/signaloid/signaloid-data-toolkit
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```
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Alternatively, clone this repository and install from source with:
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```bash
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python -m pip install .
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```
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## Usage
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### Parsing Ux Data
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Construct `DistributionalValue` Python objects by parsing
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[Ux Data](https://docs.signaloid.io/docs/uxhw-api/ux-data-format/) in
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Ux-string or Ux Binary format.
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```python
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from signaloid.distributional.distributional import DistributionalValue
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# Intermediate code which writes to ux_string and ux_binary_buffer
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# ...
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# Parse a Ux-string
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dist_value = DistributionalValue.parse(ux_string)
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# Parse a Ux Binary buffer
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dist_value = DistributionalValue.parse(ux_binary_buffer)
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```
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### Create Distribution Plots
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Create plots to visualize distributional information by using the
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[`plot` function](https://github.com/signaloid/signaloid-data-toolkit/blob/main/src/signaloid/distributional_information_plotting/plot_wrapper.py)
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with a `PlotData` object built from a `DistributionalValue` containing Ux Data.
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The `plot` function is a wrapper function for the `PlotHistogramDiracDeltas`
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class for plotting a distributional value as a histogram with variable bin
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widths.
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```python
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from signaloid.distributional.distributional import DistributionalValue
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from signaloid.distributional_information_plotting.plot_histogram_dirac_deltas import PlotData
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from signaloid.distributional_information_plotting.plot_wrapper import plot
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# Intermediate code which writes to ux_string
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# ...
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# Create distributional value object from Ux-string
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dist_value = DistributionalValue.parse(ux_string)
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plot(PlotData(dist_value))
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```
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For plotting from raw samples, saving to a file, and the other `plot` options,
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see the package [README.md](https://github.com/signaloid/signaloid-data-toolkit/blob/main/src/signaloid/distributional_information_plotting/README.md).
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### Sample from Ux Data
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Draw random samples from a distributional value with the
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[`sample_generator` function](https://github.com/signaloid/signaloid-data-toolkit/blob/main/src/signaloid/distributional_information_plotting/sample_generator.py).
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Samples of the finite part of the distribution are drawn by inverse transform
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sampling of the binned distribution. Distributions that also carry non-finite
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mass (`NaN`, `-Inf`, `+Inf`) are sampled as a mixture, with each sample drawn
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from the finite or the non-finite part in proportion to their masses.
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90
|
+
|
|
91
|
+
```python
|
|
92
|
+
from signaloid.distributional_information_plotting.sample_generator import sample_generator
|
|
93
|
+
|
|
94
|
+
# Intermediate code which writes to ux_string
|
|
95
|
+
# ...
|
|
96
|
+
|
|
97
|
+
samples = sample_generator(ux_string, n_samples=1000)
|
|
98
|
+
```
|
|
99
|
+
|
|
100
|
+
To sample from a `DistributionalValue` that is already parsed, use
|
|
101
|
+
`sample_from_distributional_value` from the same module.
|
|
@@ -0,0 +1,79 @@
|
|
|
1
|
+
[tool.poetry]
|
|
2
|
+
name = "signaloid"
|
|
3
|
+
version = "2.0.0"
|
|
4
|
+
description = "Signaloid Data Toolkit for interacting with Signaloid's UxHw®."
|
|
5
|
+
readme = "README.md"
|
|
6
|
+
license = "MIT"
|
|
7
|
+
homepage = "https://signaloid.com"
|
|
8
|
+
repository = "https://github.com/signaloid/signaloid-data-toolkit"
|
|
9
|
+
authors = [
|
|
10
|
+
"Signaloid <info@signaloid.com>"
|
|
11
|
+
]
|
|
12
|
+
|
|
13
|
+
packages = [
|
|
14
|
+
{ include = "signaloid", from = "src" }
|
|
15
|
+
]
|
|
16
|
+
|
|
17
|
+
[tool.poetry-dynamic-versioning]
|
|
18
|
+
enable = false
|
|
19
|
+
vcs = "git"
|
|
20
|
+
style = "pep440"
|
|
21
|
+
|
|
22
|
+
|
|
23
|
+
[tool.poetry.group.dev.dependencies]
|
|
24
|
+
wheel = "^0.46.3"
|
|
25
|
+
types-toml = "^0.10.8.20240310"
|
|
26
|
+
pytest = "^9.0.3"
|
|
27
|
+
mypy = "^1.19.1"
|
|
28
|
+
flake8 = "^7.3.0"
|
|
29
|
+
toml = "^0.10.2"
|
|
30
|
+
black = "^26.3.1"
|
|
31
|
+
|
|
32
|
+
[build-system]
|
|
33
|
+
requires = ["poetry-core>=1.9.1", "poetry-dynamic-versioning>=1.0.0,<2.0.0"]
|
|
34
|
+
build-backend = "poetry_dynamic_versioning.backend"
|
|
35
|
+
|
|
36
|
+
[tool.poetry.dependencies]
|
|
37
|
+
python = ">=3.11,<4"
|
|
38
|
+
numpy = [
|
|
39
|
+
{ version = ">=2.0.0", python = ">=3.11,<3.13" },
|
|
40
|
+
{ version = ">=2.1.0", python = ">=3.11,<3.14" },
|
|
41
|
+
{ version = ">=2.4.1", python = ">=3.11,<3.15" },
|
|
42
|
+
]
|
|
43
|
+
matplotlib = [
|
|
44
|
+
{ version = ">=3.9.0", python = ">=3.11,<3.13" },
|
|
45
|
+
{ version = ">=3.10.0", python = ">=3.11,<3.14" },
|
|
46
|
+
{ version = ">=3.10.5", python = ">=3.11,<3.15" },
|
|
47
|
+
]
|
|
48
|
+
pillow = ">=13.0.0"
|
|
49
|
+
scipy = ">=1.14.0"
|
|
50
|
+
|
|
51
|
+
[tool.poetry.scripts]
|
|
52
|
+
signaloid-uxdata-toolkit = "signaloid.uxdata_toolkit:main"
|
|
53
|
+
|
|
54
|
+
[tool.mypy]
|
|
55
|
+
warn_unused_configs = true
|
|
56
|
+
strict = true
|
|
57
|
+
disallow_any_generics = false
|
|
58
|
+
python_version = "3.11"
|
|
59
|
+
exclude = '(^|/)\.venv/'
|
|
60
|
+
# `signaloid` is a PEP 420 namespace package, so it has no top-level `py.typed`
|
|
61
|
+
# marker. Resolve it from the source tree (via `mypy_path`) rather than as an
|
|
62
|
+
# installed distribution, so `mypy -p signaloid` type-checks the sources
|
|
63
|
+
# directly instead of failing on the absent namespace-level marker.
|
|
64
|
+
mypy_path = "src"
|
|
65
|
+
namespace_packages = true
|
|
66
|
+
explicit_package_bases = true
|
|
67
|
+
|
|
68
|
+
[[tool.mypy.overrides]]
|
|
69
|
+
module = [
|
|
70
|
+
"signaloid.distributional_information_plotting.*",
|
|
71
|
+
"signaloid.distributional.*",
|
|
72
|
+
"signaloid.circuitpython.*",
|
|
73
|
+
]
|
|
74
|
+
disallow_untyped_calls = false
|
|
75
|
+
disallow_untyped_defs = false
|
|
76
|
+
disallow_incomplete_defs = false
|
|
77
|
+
warn_unused_ignores = false
|
|
78
|
+
check_untyped_defs = false
|
|
79
|
+
strict_equality = false
|
|
@@ -0,0 +1,3 @@
|
|
|
1
|
+
### Helpers for CircuitPython
|
|
2
|
+
- `extended_ulab_numpy.py`: Extends the [ulab numpy implementation](https://docs.circuitpython.org/en/latest/shared-bindings/ulab/numpy/index.html) with extra methods needed for the `distributional` and `distributional_information_plotting` modules.
|
|
3
|
+
- `plot_wrapper.py`: Implements a plot renderer specifically for Signaloid Ux histograms.
|
|
File without changes
|