sigima 0.0.1.dev0__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
@@ -0,0 +1,29 @@
1
+ BSD 3-Clause License
2
+
3
+ Copyright (c) 2023, DataLab Platform Developers.
4
+ All rights reserved.
5
+
6
+ Redistribution and use in source and binary forms, with or without
7
+ modification, are permitted provided that the following conditions are met:
8
+
9
+ 1. Redistributions of source code must retain the above copyright notice, this
10
+ list of conditions and the following disclaimer.
11
+
12
+ 2. Redistributions in binary form must reproduce the above copyright notice,
13
+ this list of conditions and the following disclaimer in the documentation
14
+ and/or other materials provided with the distribution.
15
+
16
+ 3. Neither the name of the copyright holder nor the names of its
17
+ contributors may be used to endorse or promote products derived from
18
+ this software without specific prior written permission.
19
+
20
+ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
21
+ AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
22
+ IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
23
+ DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
24
+ FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
25
+ DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
26
+ SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
27
+ CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
28
+ OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
29
+ OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
@@ -0,0 +1,4 @@
1
+ graft doc
2
+ include CHANGELOG.md
3
+ include CONTRIBUTING.md
4
+ include requirements.txt
@@ -0,0 +1,60 @@
1
+ Metadata-Version: 2.4
2
+ Name: sigima
3
+ Version: 0.0.1.dev0
4
+ Summary: Scientific computing engine for 1D signals and 2D images, part of the DataLab open-source platform.
5
+ Author-email: Pierre Raybaut <p.raybaut@codra.fr>
6
+ Maintainer-email: DataLab Platform Developers <p.raybaut@codra.fr>
7
+ License-Expression: BSD-3-Clause
8
+ Project-URL: Homepage, https://datalab-platform.com/
9
+ Project-URL: Documentation, https://datalab-platform.com/
10
+ Classifier: Development Status :: 5 - Production/Stable
11
+ Classifier: Intended Audience :: Developers
12
+ Classifier: Intended Audience :: Education
13
+ Classifier: Intended Audience :: Science/Research
14
+ Classifier: Intended Audience :: End Users/Desktop
15
+ Classifier: Operating System :: MacOS :: MacOS X
16
+ Classifier: Operating System :: Microsoft :: Windows :: Windows 7
17
+ Classifier: Operating System :: Microsoft :: Windows :: Windows 8
18
+ Classifier: Operating System :: Microsoft :: Windows :: Windows 10
19
+ Classifier: Operating System :: Microsoft :: Windows :: Windows 11
20
+ Classifier: Operating System :: POSIX :: Linux
21
+ Classifier: Programming Language :: Python :: 3.9
22
+ Classifier: Programming Language :: Python :: 3.10
23
+ Classifier: Programming Language :: Python :: 3.11
24
+ Classifier: Programming Language :: Python :: 3.12
25
+ Classifier: Programming Language :: Python :: 3.13
26
+ Classifier: Topic :: Scientific/Engineering
27
+ Classifier: Topic :: Scientific/Engineering :: Image Processing
28
+ Classifier: Topic :: Software Development :: Libraries :: Python Modules
29
+ Requires-Python: <4,>=3.9
30
+ Description-Content-Type: text/markdown
31
+ License-File: LICENSE
32
+ Requires-Dist: guidata>=3.9
33
+ Requires-Dist: SciPy<1.15.0,>=1.5
34
+ Requires-Dist: scikit-image>=0.18
35
+ Requires-Dist: pandas>=1.2
36
+ Requires-Dist: PyWavelets>=1.1
37
+ Provides-Extra: opencv
38
+ Requires-Dist: opencv-python-headless>=4.5; extra == "opencv"
39
+ Provides-Extra: dev
40
+ Requires-Dist: ruff; extra == "dev"
41
+ Requires-Dist: pylint; extra == "dev"
42
+ Requires-Dist: Coverage; extra == "dev"
43
+ Provides-Extra: doc
44
+ Requires-Dist: sphinx; extra == "doc"
45
+ Requires-Dist: sphinx_intl; extra == "doc"
46
+ Requires-Dist: sphinx-sitemap; extra == "doc"
47
+ Requires-Dist: myst_parser; extra == "doc"
48
+ Requires-Dist: sphinx_design; extra == "doc"
49
+ Requires-Dist: sphinx-copybutton; extra == "doc"
50
+ Requires-Dist: pydata-sphinx-theme; extra == "doc"
51
+ Provides-Extra: test
52
+ Requires-Dist: pytest; extra == "test"
53
+ Requires-Dist: pytest-xvfb; extra == "test"
54
+ Dynamic: license-file
55
+
56
+ # sigima
57
+
58
+ Placeholder for the future 'sigima' package, which will contain the computation and processing core of DataLab.
59
+
60
+ This package name is reserved for future use.
@@ -0,0 +1,5 @@
1
+ # sigima
2
+
3
+ Placeholder for the future 'sigima' package, which will contain the computation and processing core of DataLab.
4
+
5
+ This package name is reserved for future use.
@@ -0,0 +1,119 @@
1
+ # sigima setup configuration file
2
+
3
+ [project]
4
+ name = "sigima"
5
+ authors = [{ name = "Pierre Raybaut", email = "p.raybaut@codra.fr" }]
6
+ maintainers = [
7
+ { name = "DataLab Platform Developers", email = "p.raybaut@codra.fr" },
8
+ ]
9
+ description = "Scientific computing engine for 1D signals and 2D images, part of the DataLab open-source platform."
10
+ readme = "README.md"
11
+ license = "BSD-3-Clause"
12
+ license-files = ["LICENSE"]
13
+ classifiers = [
14
+ "Development Status :: 5 - Production/Stable",
15
+ "Intended Audience :: Developers",
16
+ "Intended Audience :: Education",
17
+ "Intended Audience :: Science/Research",
18
+ "Intended Audience :: End Users/Desktop",
19
+ "Operating System :: MacOS :: MacOS X",
20
+ "Operating System :: Microsoft :: Windows :: Windows 7",
21
+ "Operating System :: Microsoft :: Windows :: Windows 8",
22
+ "Operating System :: Microsoft :: Windows :: Windows 10",
23
+ "Operating System :: Microsoft :: Windows :: Windows 11",
24
+ "Operating System :: POSIX :: Linux",
25
+ "Programming Language :: Python :: 3.9",
26
+ "Programming Language :: Python :: 3.10",
27
+ "Programming Language :: Python :: 3.11",
28
+ "Programming Language :: Python :: 3.12",
29
+ "Programming Language :: Python :: 3.13",
30
+ "Topic :: Scientific/Engineering",
31
+ "Topic :: Scientific/Engineering :: Image Processing",
32
+ "Topic :: Software Development :: Libraries :: Python Modules",
33
+ ]
34
+ requires-python = ">=3.9, <4"
35
+ dependencies = [
36
+ "guidata >= 3.9",
37
+ "SciPy >= 1.5, < 1.15.0",
38
+ "scikit-image >= 0.18",
39
+ "pandas >= 1.2",
40
+ "PyWavelets >= 1.1",
41
+ ]
42
+ dynamic = ["version"]
43
+
44
+ [build-system]
45
+ requires = ["setuptools"]
46
+ build-backend = "setuptools.build_meta"
47
+
48
+ [project.urls]
49
+ Homepage = "https://datalab-platform.com/"
50
+ Documentation = "https://datalab-platform.com/"
51
+
52
+ [project.optional-dependencies]
53
+ opencv = ["opencv-python-headless >= 4.5"]
54
+ dev = ["ruff", "pylint", "Coverage"]
55
+ doc = [
56
+ "sphinx",
57
+ "sphinx_intl",
58
+ "sphinx-sitemap",
59
+ "myst_parser",
60
+ "sphinx_design",
61
+ "sphinx-copybutton",
62
+ "pydata-sphinx-theme",
63
+ ]
64
+ test = ["pytest", "pytest-xvfb"]
65
+
66
+ [tool.setuptools.packages.find]
67
+ include = ["sigima*"]
68
+
69
+ [tool.setuptools.package-data]
70
+ "*" = [
71
+ "*.pdf",
72
+ "*.png",
73
+ "*.svg",
74
+ "*.mo",
75
+ "*.txt",
76
+ "*.json",
77
+ "*_test.h5",
78
+ "*.npy",
79
+ "*.dcm",
80
+ "*.scor-data",
81
+ "*.tiff",
82
+ "*.jpg",
83
+ "*.sif",
84
+ "*.csv",
85
+ "*.mat",
86
+ "*.js",
87
+ "*.css",
88
+ "*.html",
89
+ "*.buildinfo",
90
+ "*.inv",
91
+ ]
92
+
93
+ [tool.setuptools.dynamic]
94
+ version = { attr = "sigima.__version__" }
95
+
96
+ [tool.pytest.ini_options]
97
+ addopts = "sigima"
98
+
99
+ [tool.ruff]
100
+ exclude = [".git", ".vscode", "build", "dist", "*.ipynb"]
101
+ line-length = 88 # Same as Black.
102
+ indent-width = 4 # Same as Black.
103
+ target-version = "py39" # Assume Python 3.9.
104
+
105
+ [tool.ruff.lint]
106
+ # all rules can be found here: https://beta.ruff.rs/docs/rules/
107
+ select = ["E", "F", "W", "I", "NPY201"]
108
+ ignore = [
109
+ "E203", # space before : (needed for how black formats slicing)
110
+ ]
111
+
112
+ [tool.ruff.format]
113
+ quote-style = "double" # Like Black, use double quotes for strings.
114
+ indent-style = "space" # Like Black, indent with spaces, rather than tabs.
115
+ skip-magic-trailing-comma = false # Like Black, respect magic trailing commas.
116
+ line-ending = "auto" # Like Black, automatically detect the appropriate line ending.
117
+
118
+ [tool.ruff.lint.per-file-ignores]
119
+ "doc/*" = ["E402"]
@@ -0,0 +1,25 @@
1
+ guidata
2
+ scikit-image
3
+ opencv-python-headless
4
+ pandas
5
+ PyWavelets
6
+ psutil
7
+ pylint
8
+ ruff
9
+ coverage
10
+ pytest
11
+ pytest-xvfb
12
+ pycodestyle
13
+ pyinstaller>=6.2
14
+ sphinx
15
+ sphinx-intl
16
+ sphinx-sitemap
17
+ myst_parser
18
+ sphinx_design
19
+ sphinx-copybutton
20
+ pydata-sphinx-theme
21
+ esbonio
22
+ rstcheck
23
+ doc8
24
+ build
25
+ twine
@@ -0,0 +1,4 @@
1
+ [egg_info]
2
+ tag_build =
3
+ tag_date = 0
4
+
@@ -0,0 +1,2 @@
1
+ """Placeholder for future sigima package."""
2
+ __version__ = "0.0.1.dev0"
@@ -0,0 +1,60 @@
1
+ Metadata-Version: 2.4
2
+ Name: sigima
3
+ Version: 0.0.1.dev0
4
+ Summary: Scientific computing engine for 1D signals and 2D images, part of the DataLab open-source platform.
5
+ Author-email: Pierre Raybaut <p.raybaut@codra.fr>
6
+ Maintainer-email: DataLab Platform Developers <p.raybaut@codra.fr>
7
+ License-Expression: BSD-3-Clause
8
+ Project-URL: Homepage, https://datalab-platform.com/
9
+ Project-URL: Documentation, https://datalab-platform.com/
10
+ Classifier: Development Status :: 5 - Production/Stable
11
+ Classifier: Intended Audience :: Developers
12
+ Classifier: Intended Audience :: Education
13
+ Classifier: Intended Audience :: Science/Research
14
+ Classifier: Intended Audience :: End Users/Desktop
15
+ Classifier: Operating System :: MacOS :: MacOS X
16
+ Classifier: Operating System :: Microsoft :: Windows :: Windows 7
17
+ Classifier: Operating System :: Microsoft :: Windows :: Windows 8
18
+ Classifier: Operating System :: Microsoft :: Windows :: Windows 10
19
+ Classifier: Operating System :: Microsoft :: Windows :: Windows 11
20
+ Classifier: Operating System :: POSIX :: Linux
21
+ Classifier: Programming Language :: Python :: 3.9
22
+ Classifier: Programming Language :: Python :: 3.10
23
+ Classifier: Programming Language :: Python :: 3.11
24
+ Classifier: Programming Language :: Python :: 3.12
25
+ Classifier: Programming Language :: Python :: 3.13
26
+ Classifier: Topic :: Scientific/Engineering
27
+ Classifier: Topic :: Scientific/Engineering :: Image Processing
28
+ Classifier: Topic :: Software Development :: Libraries :: Python Modules
29
+ Requires-Python: <4,>=3.9
30
+ Description-Content-Type: text/markdown
31
+ License-File: LICENSE
32
+ Requires-Dist: guidata>=3.9
33
+ Requires-Dist: SciPy<1.15.0,>=1.5
34
+ Requires-Dist: scikit-image>=0.18
35
+ Requires-Dist: pandas>=1.2
36
+ Requires-Dist: PyWavelets>=1.1
37
+ Provides-Extra: opencv
38
+ Requires-Dist: opencv-python-headless>=4.5; extra == "opencv"
39
+ Provides-Extra: dev
40
+ Requires-Dist: ruff; extra == "dev"
41
+ Requires-Dist: pylint; extra == "dev"
42
+ Requires-Dist: Coverage; extra == "dev"
43
+ Provides-Extra: doc
44
+ Requires-Dist: sphinx; extra == "doc"
45
+ Requires-Dist: sphinx_intl; extra == "doc"
46
+ Requires-Dist: sphinx-sitemap; extra == "doc"
47
+ Requires-Dist: myst_parser; extra == "doc"
48
+ Requires-Dist: sphinx_design; extra == "doc"
49
+ Requires-Dist: sphinx-copybutton; extra == "doc"
50
+ Requires-Dist: pydata-sphinx-theme; extra == "doc"
51
+ Provides-Extra: test
52
+ Requires-Dist: pytest; extra == "test"
53
+ Requires-Dist: pytest-xvfb; extra == "test"
54
+ Dynamic: license-file
55
+
56
+ # sigima
57
+
58
+ Placeholder for the future 'sigima' package, which will contain the computation and processing core of DataLab.
59
+
60
+ This package name is reserved for future use.
@@ -0,0 +1,11 @@
1
+ LICENSE
2
+ MANIFEST.in
3
+ README.md
4
+ pyproject.toml
5
+ requirements.txt
6
+ sigima/__init__.py
7
+ sigima.egg-info/PKG-INFO
8
+ sigima.egg-info/SOURCES.txt
9
+ sigima.egg-info/dependency_links.txt
10
+ sigima.egg-info/requires.txt
11
+ sigima.egg-info/top_level.txt
@@ -0,0 +1,26 @@
1
+ guidata>=3.9
2
+ SciPy<1.15.0,>=1.5
3
+ scikit-image>=0.18
4
+ pandas>=1.2
5
+ PyWavelets>=1.1
6
+
7
+ [dev]
8
+ ruff
9
+ pylint
10
+ Coverage
11
+
12
+ [doc]
13
+ sphinx
14
+ sphinx_intl
15
+ sphinx-sitemap
16
+ myst_parser
17
+ sphinx_design
18
+ sphinx-copybutton
19
+ pydata-sphinx-theme
20
+
21
+ [opencv]
22
+ opencv-python-headless>=4.5
23
+
24
+ [test]
25
+ pytest
26
+ pytest-xvfb
@@ -0,0 +1 @@
1
+ sigima