shrinkers 0.1.1__tar.gz

shrinkers-0.1.1/.cargo/config.toml

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+# Enable native CPU instructions (AVX2, FMA, NEON, etc.)
+# Without this, Rust only uses baseline features for the target arch.
+# On Apple M-series this enables the full NEON ISA + FMA.
+# Also enables auto-vectorization and use of advanced SIMD instructions.
+#
+# Note: We do NOT set FTZ/DAZ globally via build script because it has
+# weird interactions with some libraries. Instead, we handle it at runtime
+# in the entry points (Python bindings and public API).
+[target.'cfg(all())']
+rustflags = ["-C", "target-cpu=native"]

shrinkers-0.1.1/.github/workflows/ci.yml

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+name: CI
+
+on:
+  push:
+    branches: [main]
+  pull_request:
+  workflow_dispatch:
+
+env:
+  CARGO_TERM_COLOR: always
+
+jobs:
+  rust:
+    name: Rust — fmt / clippy / test
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: Install Rust toolchain
+        uses: dtolnay/rust-toolchain@stable
+        with:
+          components: rustfmt, clippy
+
+      - name: Cache cargo build
+        uses: Swatinem/rust-cache@v2
+
+      - name: Format check
+        run: cargo fmt --check
+
+      - name: Clippy (all targets, deny warnings)
+        run: cargo clippy --all-targets -- -D warnings
+
+      - name: Tests
+        run: cargo test
+
+  python:
+    name: Python ${{ matrix.python-version }} — wheel + pytest
+    runs-on: ubuntu-latest
+    strategy:
+      fail-fast: false
+      matrix:
+        python-version: ["3.10", "3.13"]
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: Set up Python ${{ matrix.python-version }}
+        uses: actions/setup-python@v5
+        with:
+          python-version: ${{ matrix.python-version }}
+
+      - name: Cache cargo build
+        uses: Swatinem/rust-cache@v2
+
+      - name: Build wheel (maturin)
+        uses: PyO3/maturin-action@v1
+        with:
+          command: build
+          args: --release --out dist --find-interpreter
+          manylinux: auto
+
+      - name: Install wheel + test deps
+        run: |
+          pip install --force-reinstall --find-links dist shrinkers
+          pip install numpy pytest
+
+      - name: Import smoke test
+        run: |
+          python -c "import shrinkers; print('shrinkers', shrinkers.__version__)"
+          python -c "
+          import numpy as np, shrinkers
+          res = shrinkers.deconvolve_spiked(np.arange(1, 11, dtype=np.float64), c=0.25)
+          assert 'spikes' in res and 'bulk' in res
+          print('deconvolve_spiked OK:', res['k'], 'spikes detected')
+          "
+
+      - name: Python API tests
+        run: pytest tests -q

shrinkers-0.1.1/.github/workflows/release.yml

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+name: Release
+
+on:
+  push:
+    tags: ["v*"]
+
+permissions:
+  contents: read
+
+jobs:
+  build-wheels:
+    name: Wheel — ${{ matrix.os }} ${{ matrix.target }}
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - { os: ubuntu-latest, target: x86_64 }
+          - { os: ubuntu-latest, target: aarch64 }
+          # GitHub retired the Intel macos-13 runner label; build the
+          # x86_64 wheel by cross-compiling on the arm64 runner instead
+          # (maturin-action installs the rustup target automatically).
+          - { os: macos-14, target: aarch64 }
+          - { os: macos-14, target: x86_64 }
+          - { os: windows-latest, target: x86_64 }
+    runs-on: ${{ matrix.os }}
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: Build wheel (maturin)
+        uses: PyO3/maturin-action@v1
+        with:
+          target: ${{ matrix.target }}
+          command: build
+          args: --release --out dist
+          manylinux: auto
+
+      - uses: actions/upload-artifact@v4
+        with:
+          name: wheel-${{ matrix.os }}-${{ matrix.target }}
+          path: dist
+
+  sdist:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: Build sdist (maturin)
+        uses: PyO3/maturin-action@v1
+        with:
+          command: sdist
+          args: --out dist
+
+      - uses: actions/upload-artifact@v4
+        with:
+          name: sdist
+          path: dist
+
+  publish-pypi:
+    needs: [build-wheels, sdist]
+    runs-on: ubuntu-latest
+    environment: pypi
+    permissions:
+      # OIDC token for PyPI trusted publishing — no API secret needed
+      id-token: write
+    steps:
+      - uses: actions/download-artifact@v4
+        with:
+          path: dist
+          merge-multiple: true
+
+      - name: List artifacts to publish
+        run: ls -la dist/
+
+      - uses: pypa/gh-action-pypi-publish@release/v1

shrinkers-0.1.1/.github/workflows/testpypi.yml

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+name: TestPyPI dry run
+
+on:
+  workflow_dispatch:
+
+permissions:
+  contents: read
+
+jobs:
+  publish-testpypi:
+    runs-on: ubuntu-latest
+    environment: testpypi
+    permissions:
+      id-token: write
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: Build abi3 wheel + sdist (maturin)
+        uses: PyO3/maturin-action@v1
+        with:
+          command: build
+          args: --release --out dist
+          manylinux: auto
+
+      - name: Build sdist
+        uses: PyO3/maturin-action@v1
+        with:
+          command: sdist
+          args: --out dist
+
+      - uses: pypa/gh-action-pypi-publish@release/v1
+        with:
+          repository-url: https://test.pypi.org/legacy/

shrinkers-0.1.1/.gitignore

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+# Rust build artifacts
+/target
+
+# Python build artifacts
+*.so
+*.dylib
+*.dll
+*.pyd
+__pycache__/
+*.py[cod]
+*.egg-info/
+dist/
+build/
+*.whl
+
+# pixi environment (managed by pixi, not committed)
+.pixi/
+
+# Virtual environments
+.venv/
+venv/
+
+# Editor / OS
+.DS_Store
+*.swp
+.vscode/
+
+# Python tooling caches
+.ruff_cache/
+.mypy_cache/
+.pytest_cache/
+.cache/
+