seer-pas-sdk 1.2.1__tar.gz → 1.2.2__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (40) hide show
  1. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/PKG-INFO +3 -2
  2. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/pyproject.toml +2 -1
  3. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/seer_pas_sdk/common/__init__.py +2 -2
  4. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/seer_pas_sdk.egg-info/PKG-INFO +3 -2
  5. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/seer_pas_sdk.egg-info/requires.txt +2 -1
  6. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/.github/workflows/lint.yml +0 -0
  7. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/.github/workflows/publish.yml +0 -0
  8. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/.github/workflows/test.yml +0 -0
  9. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/.gitignore +0 -0
  10. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/.pre-commit-config.yaml +0 -0
  11. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/LICENSE.txt +0 -0
  12. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/README.md +0 -0
  13. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/docs/_quarto.yml +0 -0
  14. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/docs/index.qmd +0 -0
  15. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/seer_pas_sdk/__init__.py +0 -0
  16. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/seer_pas_sdk/auth/__init__.py +0 -0
  17. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/seer_pas_sdk/auth/auth.py +0 -0
  18. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/seer_pas_sdk/common/errors.py +0 -0
  19. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/seer_pas_sdk/common/groupanalysis.py +0 -0
  20. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/seer_pas_sdk/core/__init__.py +0 -0
  21. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/seer_pas_sdk/core/sdk.py +0 -0
  22. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/seer_pas_sdk/core/unsupported.py +0 -0
  23. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/seer_pas_sdk/objects/__init__.py +0 -0
  24. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/seer_pas_sdk/objects/groupanalysis.py +0 -0
  25. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/seer_pas_sdk/objects/headers.py +0 -0
  26. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/seer_pas_sdk/objects/platemap.py +0 -0
  27. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/seer_pas_sdk/objects/volcanoplot.py +0 -0
  28. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/seer_pas_sdk.egg-info/SOURCES.txt +0 -0
  29. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/seer_pas_sdk.egg-info/dependency_links.txt +0 -0
  30. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/seer_pas_sdk.egg-info/top_level.txt +0 -0
  31. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/setup.cfg +0 -0
  32. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/tests/__init__.py +0 -0
  33. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/tests/conftest.py +0 -0
  34. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/tests/objects/__init__.py +0 -0
  35. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/tests/objects/test_platemap.py +0 -0
  36. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/tests/test_auth.py +0 -0
  37. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/tests/test_common.py +0 -0
  38. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/tests/test_objects.py +0 -0
  39. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/tests/test_sdk.py +0 -0
  40. {seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/tests/unsupported_platemap.py +0 -0
{seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: seer-pas-sdk
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- Version: 1.2.1
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+ Version: 1.2.2
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  Summary: SDK for Seer Proteograph Analysis Suite (PAS)
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  Author-email: Ryan Sun <rsun@seer.bio>
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  License:
@@ -194,9 +194,10 @@ License-File: LICENSE.txt
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  Requires-Dist: boto3>=1.26.152
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  Requires-Dist: botocore>=1.29.152
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  Requires-Dist: pandas>=2.0.1
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+ Requires-Dist: pyarrow>=17.0.0
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  Requires-Dist: PyJWT>=2.8.0
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  Requires-Dist: python-dotenv>=1.0.0
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- Requires-Dist: Requests>=2.31.0
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+ Requires-Dist: requests>=2.31.0
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  Requires-Dist: tqdm>=4.65.0
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  Requires-Dist: deprecation
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  Dynamic: license-file
{seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/pyproject.toml RENAMED
@@ -18,9 +18,10 @@ dependencies = [
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  "boto3>=1.26.152",
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  "botocore>=1.29.152",
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  "pandas>=2.0.1",
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+ "pyarrow>=17.0.0",
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  "PyJWT>=2.8.0",
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  "python-dotenv>=1.0.0",
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- "Requests>=2.31.0",
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+ "requests>=2.31.0",
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  "tqdm>=4.65.0",
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  "deprecation"
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  ]
{seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/seer_pas_sdk/common/__init__.py RENAMED
@@ -143,9 +143,9 @@ def download_df(url, is_tsv=True, dtype={}, usecols=None):
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  if not url:
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  return pd.DataFrame()
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  csv = pd.read_csv(
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- url, dtype=dtype, sep="\t" if is_tsv else ",", usecols=usecols
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+ url, sep="\t" if is_tsv else ",", usecols=usecols, engine="pyarrow"
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  )
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- return csv
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+ return csv.astype(dtype=dtype) if dtype else csv
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  def get_sample_info(
{seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/seer_pas_sdk.egg-info/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: seer-pas-sdk
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- Version: 1.2.1
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+ Version: 1.2.2
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  Summary: SDK for Seer Proteograph Analysis Suite (PAS)
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  Author-email: Ryan Sun <rsun@seer.bio>
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  License:
@@ -194,9 +194,10 @@ License-File: LICENSE.txt
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  Requires-Dist: boto3>=1.26.152
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  Requires-Dist: botocore>=1.29.152
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  Requires-Dist: pandas>=2.0.1
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+ Requires-Dist: pyarrow>=17.0.0
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  Requires-Dist: PyJWT>=2.8.0
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  Requires-Dist: python-dotenv>=1.0.0
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- Requires-Dist: Requests>=2.31.0
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+ Requires-Dist: requests>=2.31.0
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  Requires-Dist: tqdm>=4.65.0
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  Requires-Dist: deprecation
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  Dynamic: license-file
{seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/seer_pas_sdk.egg-info/requires.txt RENAMED
@@ -1,8 +1,9 @@
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  boto3>=1.26.152
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  botocore>=1.29.152
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  pandas>=2.0.1
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+ pyarrow>=17.0.0
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  PyJWT>=2.8.0
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  python-dotenv>=1.0.0
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- Requests>=2.31.0
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+ requests>=2.31.0
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  tqdm>=4.65.0
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  deprecation
{seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/.gitignore RENAMED
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{seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/LICENSE.txt RENAMED
File without changes
{seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/README.md RENAMED
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{seer_pas_sdk-1.2.1 → seer_pas_sdk-1.2.2}/setup.cfg RENAMED
File without changes