sechelix 0.1.0__tar.gz

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  1. sechelix-0.1.0/.gitignore +27 -0
  2. sechelix-0.1.0/CHANGELOG.md +128 -0
  3. sechelix-0.1.0/LICENSE +198 -0
  4. sechelix-0.1.0/PKG-INFO +73 -0
  5. sechelix-0.1.0/catalog/checks.json +18203 -0
  6. sechelix-0.1.0/catalog/hypothesis-ids.txt +546 -0
  7. sechelix-0.1.0/docs/packaging/PYPI_PUBLISHING.md +50 -0
  8. sechelix-0.1.0/docs/packaging/PYPI_README.md +50 -0
  9. sechelix-0.1.0/docs/packaging/RELEASE.md +69 -0
  10. sechelix-0.1.0/docs/v4-quickstart.md +156 -0
  11. sechelix-0.1.0/examples/demo-app/README.md +37 -0
  12. sechelix-0.1.0/examples/demo-app/clean/fetch_avatar.py +22 -0
  13. sechelix-0.1.0/examples/demo-app/clean/orders.py +12 -0
  14. sechelix-0.1.0/examples/demo-app/clean/redeem.py +17 -0
  15. sechelix-0.1.0/examples/demo-app/clean/refund.py +13 -0
  16. sechelix-0.1.0/examples/demo-app/clean/render_profile.py +9 -0
  17. sechelix-0.1.0/examples/demo-app/vulnerable/fetch_avatar.py +10 -0
  18. sechelix-0.1.0/examples/demo-app/vulnerable/orders.py +10 -0
  19. sechelix-0.1.0/examples/demo-app/vulnerable/redeem.py +13 -0
  20. sechelix-0.1.0/examples/demo-app/vulnerable/refund.py +12 -0
  21. sechelix-0.1.0/examples/demo-app/vulnerable/render_profile.py +6 -0
  22. sechelix-0.1.0/pyproject.toml +80 -0
  23. sechelix-0.1.0/schemas/ai-bom-v1.schema.json +128 -0
  24. sechelix-0.1.0/schemas/applicability-input-v1.schema.json +53 -0
  25. sechelix-0.1.0/schemas/applicability-output-v1.schema.json +49 -0
  26. sechelix-0.1.0/schemas/attack-surface-v1.schema.json +76 -0
  27. sechelix-0.1.0/schemas/calibration-v1.schema.json +131 -0
  28. sechelix-0.1.0/schemas/catalog-v2.schema.json +81 -0
  29. sechelix-0.1.0/schemas/dependency-exploitability-v1.schema.json +197 -0
  30. sechelix-0.1.0/schemas/evidence-v1.schema.json +199 -0
  31. sechelix-0.1.0/schemas/extension-manifest-v1.schema.json +71 -0
  32. sechelix-0.1.0/schemas/extension-registry-v1.schema.json +39 -0
  33. sechelix-0.1.0/schemas/finding-v1.schema.json +81 -0
  34. sechelix-0.1.0/schemas/gold-check-pack-v1.schema.json +159 -0
  35. sechelix-0.1.0/schemas/knowledge-graph-v1.schema.json +58 -0
  36. sechelix-0.1.0/schemas/lesson-card-v1.schema.json +50 -0
  37. sechelix-0.1.0/schemas/mcp-graph-v1.schema.json +158 -0
  38. sechelix-0.1.0/schemas/policy-pack-v1.schema.json +135 -0
  39. sechelix-0.1.0/schemas/report-v1.schema.json +272 -0
  40. sechelix-0.1.0/schemas/research-packet-v1.schema.json +76 -0
  41. sechelix-0.1.0/schemas/runtime-trace-v1.schema.json +322 -0
  42. sechelix-0.1.0/schemas/scope-v1.schema.json +429 -0
  43. sechelix-0.1.0/schemas/secret-lifecycle-v1.schema.json +178 -0
  44. sechelix-0.1.0/schemas/source-registry-v1.schema.json +102 -0
  45. sechelix-0.1.0/sechelix_core/__init__.py +20 -0
  46. sechelix-0.1.0/sechelix_core/ai_inventory.py +372 -0
  47. sechelix-0.1.0/sechelix_core/applicability.py +90 -0
  48. sechelix-0.1.0/sechelix_core/attack_chains.py +339 -0
  49. sechelix-0.1.0/sechelix_core/attack_surface.py +54 -0
  50. sechelix-0.1.0/sechelix_core/authz_graph.py +1109 -0
  51. sechelix-0.1.0/sechelix_core/calibration.py +266 -0
  52. sechelix-0.1.0/sechelix_core/campaigns.py +271 -0
  53. sechelix-0.1.0/sechelix_core/catalog.py +258 -0
  54. sechelix-0.1.0/sechelix_core/contracts.py +441 -0
  55. sechelix-0.1.0/sechelix_core/dependency_graph.py +584 -0
  56. sechelix-0.1.0/sechelix_core/diff_review.py +447 -0
  57. sechelix-0.1.0/sechelix_core/evidence_cache.py +602 -0
  58. sechelix-0.1.0/sechelix_core/knowledge.py +100 -0
  59. sechelix-0.1.0/sechelix_core/mcp_graph.py +991 -0
  60. sechelix-0.1.0/sechelix_core/mistake_memory.py +77 -0
  61. sechelix-0.1.0/sechelix_core/patch_mode.py +345 -0
  62. sechelix-0.1.0/sechelix_core/policy_packs.py +326 -0
  63. sechelix-0.1.0/sechelix_core/pr_review.py +663 -0
  64. sechelix-0.1.0/sechelix_core/proof_bundle.py +322 -0
  65. sechelix-0.1.0/sechelix_core/quorum.py +242 -0
  66. sechelix-0.1.0/sechelix_core/remediation.py +271 -0
  67. sechelix-0.1.0/sechelix_core/revision.py +208 -0
  68. sechelix-0.1.0/sechelix_core/runtime_trace.py +974 -0
  69. sechelix-0.1.0/sechelix_core/schema_validation.py +197 -0
  70. sechelix-0.1.0/sechelix_core/secret_lifecycle.py +630 -0
  71. sechelix-0.1.0/sechelix_core/untrusted_repo.py +323 -0
  72. sechelix-0.1.0/sechelix_core/variant_hunter.py +99 -0
  73. sechelix-0.1.0/sechelix_core/variant_rules.py +248 -0
  74. sechelix-0.1.0/sechelix_runner/__init__.py +23 -0
  75. sechelix-0.1.0/sechelix_runner/adaptive.py +282 -0
  76. sechelix-0.1.0/sechelix_runner/api.py +204 -0
  77. sechelix-0.1.0/sechelix_runner/budget.py +225 -0
  78. sechelix-0.1.0/sechelix_runner/cli.py +458 -0
  79. sechelix-0.1.0/sechelix_runner/compliance.py +257 -0
  80. sechelix-0.1.0/sechelix_runner/context.py +194 -0
  81. sechelix-0.1.0/sechelix_runner/coverage.py +324 -0
  82. sechelix-0.1.0/sechelix_runner/digests.py +67 -0
  83. sechelix-0.1.0/sechelix_runner/executor.py +136 -0
  84. sechelix-0.1.0/sechelix_runner/graph.py +189 -0
  85. sechelix-0.1.0/sechelix_runner/guidance.py +153 -0
  86. sechelix-0.1.0/sechelix_runner/mcp_server.py +283 -0
  87. sechelix-0.1.0/sechelix_runner/native.py +217 -0
  88. sechelix-0.1.0/sechelix_runner/proof.py +270 -0
  89. sechelix-0.1.0/sechelix_runner/proof_exec.py +462 -0
  90. sechelix-0.1.0/sechelix_runner/protocols.py +228 -0
  91. sechelix-0.1.0/sechelix_runner/providers/__init__.py +31 -0
  92. sechelix-0.1.0/sechelix_runner/providers/base.py +155 -0
  93. sechelix-0.1.0/sechelix_runner/providers/claude_code.py +229 -0
  94. sechelix-0.1.0/sechelix_runner/providers/reasoning.py +233 -0
  95. sechelix-0.1.0/sechelix_runner/replay.py +177 -0
  96. sechelix-0.1.0/sechelix_runner/report.py +244 -0
  97. sechelix-0.1.0/sechelix_runner/roles.py +83 -0
  98. sechelix-0.1.0/sechelix_runner/runner.py +348 -0
  99. sechelix-0.1.0/sechelix_runner/sandbox.py +309 -0
  100. sechelix-0.1.0/sechelix_runner/sandbox_exec.py +160 -0
  101. sechelix-0.1.0/sechelix_runner/storage.py +305 -0
  102. sechelix-0.1.0/sechelix_runner/telemetry.py +96 -0
  103. sechelix-0.1.0/sechelix_runner/threat_model.py +182 -0
  104. sechelix-0.1.0/sechelix_runner/world.py +180 -0
  105. sechelix-0.1.0/tests/runner/__init__.py +0 -0
  106. sechelix-0.1.0/tests/runner/test_api.py +112 -0
  107. sechelix-0.1.0/tests/runner/test_budget.py +82 -0
  108. sechelix-0.1.0/tests/runner/test_compliance.py +150 -0
  109. sechelix-0.1.0/tests/runner/test_coverage_and_adaptive.py +262 -0
  110. sechelix-0.1.0/tests/runner/test_digests.py +44 -0
  111. sechelix-0.1.0/tests/runner/test_graph.py +102 -0
  112. sechelix-0.1.0/tests/runner/test_mcp.py +181 -0
  113. sechelix-0.1.0/tests/runner/test_optionality.py +73 -0
  114. sechelix-0.1.0/tests/runner/test_packaging.py +88 -0
  115. sechelix-0.1.0/tests/runner/test_proof_exec.py +254 -0
  116. sechelix-0.1.0/tests/runner/test_protocols_and_native.py +109 -0
  117. sechelix-0.1.0/tests/runner/test_providers.py +244 -0
  118. sechelix-0.1.0/tests/runner/test_replay_and_cli.py +246 -0
  119. sechelix-0.1.0/tests/runner/test_report_formats.py +125 -0
  120. sechelix-0.1.0/tests/runner/test_runner.py +179 -0
  121. sechelix-0.1.0/tests/runner/test_sandbox_and_proof.py +207 -0
  122. sechelix-0.1.0/tests/runner/test_sandbox_exec.py +138 -0
  123. sechelix-0.1.0/tests/runner/test_self_audit.py +115 -0
  124. sechelix-0.1.0/tests/runner/test_storage.py +142 -0
  125. sechelix-0.1.0/tests/runner/test_threat_model_and_guidance.py +188 -0
@@ -0,0 +1,27 @@
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+ __pycache__/
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+ *.py[cod]
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+
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+ # Intentionally NOT ignored: .agents/skills/ and .claude/skills/
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+ #
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+ # `gh skill publish --dry-run` warns that these directories "contain installed
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+ # skills" and suggests gitignoring them. That heuristic is correct for a
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+ # consumer repository, where those paths hold third-party skills pulled in by a
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+ # package manager and re-committing them would vendor someone else's code.
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+ #
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+ # SecHelix is the opposite case: it *is* the skill. `skills/sechelix/` is the
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+ # canonical source, and `.claude/skills/sechelix/` and `.agents/skills/sechelix/`
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+ # are first-party adapter mirrors of it, published deliberately so the skill
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+ # resolves in each harness without an install step. Nothing under them is
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+ # third-party. `scripts/validate_skill.py` and the "Ensure adapter mirrors
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+ # exist" step in .github/workflows/validate.yml both fail if they are missing,
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+ # so ignoring them would break CI as well as distribution.
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+ #
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+ # The warning is therefore acknowledged and rejected on purpose, not overlooked.
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+
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+ # V4 runner: local run workspaces are working data, never repository content.
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+ .sechelix/
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+
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+ # Python packaging artifacts
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+ /dist/
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+ /build/
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+ *.egg-info/
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+ # Changelog
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+
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+ All notable SecHelix release changes are summarized here. Detailed release notes live in [`docs/releases/`](docs/releases/), and the Git history remains the authoritative development record.
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+
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+ ## [4.0.0-alpha.1] - 2026-09-03
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+
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+ ### V4 evidence runtime
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+
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+ - Added the optional standard-library-only runner with deterministic DAG orchestration, least-context routing, budget/coverage state, replayable evidence, loopback API/MCP integration and fail-closed provider execution.
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+ - Added bounded LOCAL proof execution for authorization/IDOR, traversal, race/idempotency, webhook and SSRF; hardened HTTP proofs to literal loopback with no DNS names, ambient proxies or automatic redirects. Proof behavior never auto-promotes a finding.
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+ - Added graph-grounded threat modeling, conservative false-positive guidance, deep protocol packs and a candidate-only C/C++/Rust native source lane.
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+ - Added Opengrep as deterministic candidate evidence.
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+
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+ ### Measurement and product surfaces
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+
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+ - Added the fail-closed Arena protocol for end-to-end applicability, verification, false-positive refutation, root-cause, regression-proof and release-gate measurement. The full workflow remains `NOT_MEASURED`; no competitor score is published in this release.
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+ - Shipped Workbench V4 on `sechelix.com` for local recorded-run inspection without uploading artifacts.
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+ - Preserved the existing uncontaminated 76-case blind-label result and its explicit boundary: precision 0.950, recall 1.000 and FP rate 0.053 describe the label task, not the complete V4 workflow.
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+
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+ ### Distribution
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+
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+ - Bumped the Agent Skill/plugin release to `4.0.0-alpha.1` while keeping the optional Python runner at its independent `0.1.0` version.
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+ - Added release notes and automated release/SBOM publication safeguards. PyPI publication remains blocked on an external publishing credential or trusted-publisher setup.
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+
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+ See [`docs/releases/4.0.0-alpha.1.md`](docs/releases/4.0.0-alpha.1.md) for the full notes.
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+
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+ ## [3.4.0-alpha.2] - 2026-09-02
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+
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+ ### Evaluation
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+
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+ - Published the first uncontaminated blind-label evaluation: precision 0.950, detection recall 1.000, false-positive rate 0.053, false-positive rejection rate 0.947, counts TP 38 / FP 2 / TN 36 / FN 0.
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+ - Kept the two measurement layers separate everywhere: the **blind label suite is `MEASURED`**, the **full SecHelix workflow remains `NOT_MEASURED`**. `verified_precision` is 0.0 only because `verification_status` was `NOT_RUN` for every case.
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+ - Corrected the blind packet's published digest, which had been computed on a CRLF working copy and therefore failed verification for anyone following the documented download.
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+
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+ ### Public record
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+
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+ - Synced the evidence boundary across README, ROADMAP, SUPPORT, evaluation and enterprise documents, the website, and the AI-readable `llms.txt` / `llms-full.txt` surfaces.
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+ - Fixed two 404 links in `llms.txt` (`SKILL.md`, `TROPHY_CASE.md`).
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+
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+ ### Discovery
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+
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+ - Added an `/appsec-agent` product-category pillar and a second research piece on reviewing AI-generated code; declined a third page that would have duplicated the pillar.
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+ - Recorded a search-intent baseline together with the Search Console state it was not derived from (zero impressions).
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+ - Named `Google-Extended` explicitly in `robots.txt` with the same public-allow / admin-deny shape, covered by automated assertions. This governs Gemini training and grounding use, not Search ranking.
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+ - Strengthened entity structured data with stable `@id` values. No rating schema was added.
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+
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+ ## [3.4.0-alpha.1] - 2026-09-02
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+
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+ ### Evidence platform
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+
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+ - Added versioned policy packs with fail-closed applicability and expiring accepted-risk records.
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+ - Added blind verifier quorum outcomes for consensus, disagreement, and insufficient evidence.
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+ - Added root-cause security campaigns and a controlled remediation loop that never applies a patch directly to the caller's primary working tree.
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+ - Added LOCAL/STAGING runtime evidence correlation, dependency exploitability graphs, secret lifecycle tracking, MCP permission/data-flow graphs, and AI security inventory artifacts.
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+ - Added an ablation-benchmark design for comparing the same evaluator with and without SecHelix. The scored public benchmark remains **`NOT_MEASURED`** until an uncontaminated evaluator runs the blind packet.
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+
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+ ### Integrity and safety
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+
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+ - Closed an integrity gap where an extra file injected after proof-bundle export could be absent from the manifest yet pass bundle verification.
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+ - Kept runtime observations, dependency advisories, MCP declarations, and AI inventory declarations as evidence inputs rather than automatically promoting them to verified vulnerabilities.
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+ - Preserved the open-core boundary: the local security engine remains open-source and unpaywalled.
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+
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+ ### Repository and distribution
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+
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+ - Enforced PR-only, squash-only public history with concise PR-title commits and CI checks against assistant trailers, session URLs, and diary-style commit bodies.
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+ - Kept existing public history and immutable release references intact rather than rewriting provenance for cosmetic reasons.
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+ - Aligned compatibility documentation around `VERIFIED`, `DOCUMENTED`, `MODEL_COMPATIBLE`, `UNVERIFIED`, and `NOT_SHIPPED` states.
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+
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+ ### Website and discovery
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+
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+ - Added automated XML sitemap validation, canonical discovery surfaces, RSS/Atom support, trust/early-access pages, and continued `llms.txt` / `llms-full.txt` support.
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+ - Search and directory visibility remain measured separately from implementation; no ranking or recommendation claim is made by this release.
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+
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+ See [`docs/releases/3.4.0-alpha.1.md`](docs/releases/3.4.0-alpha.1.md) for the full notes.
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+
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+ ## V3.3 development milestone - 2026-09-01
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+
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+ - Added confidence calibration with withheld metrics until a sufficient uncontaminated sample exists.
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+ - Added incremental evidence caching, proof bundles, authorization graph analysis, and PR security review.
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+ - Added mutation/property tests that found and closed fail-open behavior in the release gate and revision freshness logic.
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+ - Added a one-command blind-evaluation runbook; the public benchmark remained `NOT_MEASURED`.
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+
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+ ## [3.2.0-alpha.1] - 2026-09-01
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+
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+ - Fixed Agent Skills packaging so installs use the portable skill bundle rather than copying the whole development repository.
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+ - Moved non-agent documentation out of the executable agent directory and split the Claude marketplace into its own repository.
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+ - Added untrusted-repository mode, differential review, attack-chain correlation, revision binding, patch mode, and variant-rule generation.
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+ - Expanded framework-aware and AI/MCP security guidance while preserving independent verification and fail-closed release semantics.
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+ - Published the first authorized worked case study, including both a verified/fixed finding and a plausible candidate that was independently refuted.
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+
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+ See [`docs/releases/3.2.0-alpha.1.md`](docs/releases/3.2.0-alpha.1.md).
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+
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+ ## [3.0.0-alpha.5] - 2026-09-01
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+
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+ - Reconciled the canonical report contract with renderers and release gates.
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+ - Made missing required evidence fail closed as `INCOMPLETE` rather than silently passing.
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+ - Reworked blind evaluation export/scoring and recorded the contaminated-evaluator blocker instead of publishing a contaminated score.
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+ - Expanded the first Gold Check Packs, knowledge graph, and case-study/evidence program.
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+
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+ ## [3.0.0-alpha.4] - 2026-09-01
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+
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+ - Finished the V2 Pro private product surfaces for the verification console, Workbench, Attack Surface, Authorization Matrix, Variant Analysis, Benchmark Lab, and Command Center.
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+ - Preserved the separation between severity and verification state and kept benchmark UI honest when no measured result exists.
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+
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+ ## [3.0.0-alpha.3] - 2026-09-01
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+
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+ - Added rights-aware source trust, knowledge graph, lesson-card, and live-research contracts.
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+ - Added explicit human-only boundaries for restricted training curricula and provenance-backed security research states.
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+
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+ ## [3.0.0-alpha.2] - 2026-09-01
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+
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+ - Added the curated extension registry and extension safety/validation lifecycle.
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+ - Prevented community extensions from self-promoting to official status without maintainer review and fixture evidence.
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+
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+ ## [3.0.0-alpha.1] - 2026-08-31
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+
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+ - Materialized the stable hypothesis catalog, versioned contracts, specialist roles, normalized evidence adapters, report formats, and fail-closed release-gate foundation.
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+ - Established self-contained Agent Skills distribution and the public/private website-source boundary.
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+
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+ ## [2.2.0] - 2026-08-31
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+
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+ - Rebuilt the public README and repository contribution/security surfaces for open-source launch.
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+ - Standardized Agent Skills installation and added evidence-only Trophy Case and benchmark methodology documentation.
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+
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+ ## [2.1.0] - 2026-08-31
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+
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+ - Introduced the portable Agent Skills architecture, composable security-family/verification-lens model, independent verifier methodology, company rollout documentation, and first public site/CI foundation.
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+ - Renamed the early prototype to **SecHelix** and established evidence-based model/tool claims as a project rule.
sechelix-0.1.0/LICENSE ADDED
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+ Apache License
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@@ -0,0 +1,73 @@
1
+ Metadata-Version: 2.5
2
+ Name: sechelix
3
+ Version: 0.1.0
4
+ Summary: Optional execution runtime for the SecHelix AppSec Agent Skill: deterministic reasoner DAG, budget governor, coverage ledger and replayable evidence.
5
+ Project-URL: Homepage, https://sechelix.com
6
+ Project-URL: Repository, https://github.com/omarmohelal/SecHelix
7
+ Project-URL: Documentation, https://github.com/omarmohelal/SecHelix/blob/main/docs/v4-quickstart.md
8
+ Project-URL: Changelog, https://github.com/omarmohelal/SecHelix/blob/main/CHANGELOG.md
9
+ Author: Omar Mohamed Helal
10
+ License-Expression: Apache-2.0
11
+ License-File: LICENSE
12
+ Keywords: agent-skills,ai-security,application-security,appsec,mcp-security,security-audit,security-review,static-analysis
13
+ Classifier: Development Status :: 3 - Alpha
14
+ Classifier: Environment :: Console
15
+ Classifier: Intended Audience :: Developers
16
+ Classifier: License :: OSI Approved :: Apache Software License
17
+ Classifier: Programming Language :: Python :: 3
18
+ Classifier: Programming Language :: Python :: 3 :: Only
19
+ Classifier: Topic :: Security
20
+ Classifier: Topic :: Software Development :: Quality Assurance
21
+ Requires-Python: >=3.10
22
+ Description-Content-Type: text/markdown
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+
24
+ # sechelix
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+
26
+ Optional execution runtime for the **SecHelix AppSec Agent Skill**.
27
+
28
+ The Agent Skill is the product and works without this package. Install `sechelix`
29
+ when you want the workflow orchestrated by code instead of by an agent reading
30
+ `SKILL.md`.
31
+
32
+ ```bash
33
+ pipx install sechelix # or: uv tool install sechelix
34
+ sechelix doctor
35
+ sechelix audit .
36
+ ```
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+
38
+ ## What it does
39
+
40
+ - a deterministic reasoner DAG over 18 node roles, with cycle rejection
41
+ - per-node telemetry: model, provider, tokens, cost, duration, context digest
42
+ - a budget governor that **fails closed** — running out before a required
43
+ verification produces `INCOMPLETE`, never a clean gate
44
+ - least-context specialist views, so a dependency reasoner never sees the whole
45
+ repository narrative
46
+ - a coverage ledger that records what previous runs did **not** examine
47
+ - replayable run workspaces with tamper detection
48
+
49
+ ## The first run will say INCOMPLETE
50
+
51
+ That is correct. The runner orchestrates; it does not reason about code. With no
52
+ reasoning executor configured every specialist lane is `BLOCKED` and the run
53
+ reports `No security claim can be made from this run.`
54
+
55
+ A stub returning "no findings" would be indistinguishable from a genuine clean
56
+ audit, and a fail-closed gate would hand out a PASS for a run that examined
57
+ nothing. To actually analyse code, pass `--executor claude-code` with an
58
+ authenticated Claude Code CLI on `PATH`.
59
+
60
+ ## No dependencies
61
+
62
+ The runner uses the standard library only, and a test asserts it. A security tool
63
+ that drags in a dependency tree has widened the attack surface of the thing it
64
+ was installed to protect.
65
+
66
+ ## Status
67
+
68
+ Alpha. Nothing here has been measured against another tool, and no comparative
69
+ claim is made. See the repository for what is measured and what is not.
70
+
71
+ - Repository: https://github.com/omarmohelal/SecHelix
72
+ - Quickstart: https://github.com/omarmohelal/SecHelix/blob/main/docs/v4-quickstart.md
73
+ - Licence: Apache-2.0