sclab 0.3.1__tar.gz → 0.3.2__tar.gz

{sclab-0.3.1 → sclab-0.3.2}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: sclab
-Version: 0.3.1
+Version: 0.3.2
 Summary: sclab
 Author-email: Argenis Arriojas <ArriojasMaldonado001@umb.edu>
 Requires-Python: >=3.10,<3.13

{sclab-0.3.1 → sclab-0.3.2}/pyproject.toml

@@ -1,6 +1,6 @@
 [project]
 name = "sclab"
-version = "0.3.1"
+version = "0.3.2"
 description = "sclab"
 readme = "README.md"
 authors = [

{sclab-0.3.1 → sclab-0.3.2}/src/sclab/__init__.py

@@ -6,4 +6,4 @@ __all__ = [
     "SCLabDashboard",
 ]
 
-__version__ = "0.3.1"
+__version__ = "0.3.2"

{sclab-0.3.1 → sclab-0.3.2}/src/sclab/_sclab.py

@@ -1,7 +1,6 @@
 import inspect
 from io import BytesIO
 from pathlib import Path
-import tempfile
 
 from anndata import AnnData
 from IPython.display import display
@@ -238,6 +237,8 @@ class DataLoader(VBox):
         self.adata = adata
 
     def on_upload(self, *args, **kwargs):
+        import tempfile
+
         from .scanpy.readwrite import read_10x_h5, read_h5ad
 
         files = self.upload.value

{sclab-0.3.1 → sclab-0.3.2}/src/sclab/dataset/processor/_results_panel.py

@@ -1,14 +1,24 @@
-from ipywidgets import GridBox, Layout, Stack, ToggleButtons, link
+from ipywidgets import Box, Dropdown, Layout, Stack, VBox, link
 
 from sclab.event import EventBroker, EventClient
 
+# Create a layout with a bottom border to act as the horizontal line
+hr_layout = Layout(
+    border="1px solid black",  # 1px width, solid style, black color
+    margin="10px 0",  # Add margin for spacing above and below
+    width="100%",  # Extend the line across the full width
+)
+
+# Create a Box widget with the styled layout
+hr = Box(layout=hr_layout)
+
 
 class _Results:
     namespace: str
 
 
-class ResultsPanel(GridBox, EventClient):
-    available_results: ToggleButtons
+class ResultsPanel(VBox, EventClient):
+    available_results: Dropdown
     results_stack: Stack
 
     events: list[str] = [
@@ -22,7 +32,7 @@ class ResultsPanel(GridBox, EventClient):
     ):
         EventClient.__init__(self, broker)
 
-        self.available_results = ToggleButtons(options={})
+        self.available_results = Dropdown(options={}, description="Category")
         self.results_stack = Stack([])
 
         link(
@@ -30,15 +40,19 @@ class ResultsPanel(GridBox, EventClient):
             (self.results_stack, "selected_index"),
         )
 
-        GridBox.__init__(
+        VBox.__init__(
             self,
-            [self.available_results, self.results_stack],
-            layout=Layout(
-                width="100%",
-                grid_template_columns="150px auto",
-                grid_template_areas=""" "available-results selected-results_stack" """,
-                border="0px solid black",
-            ),
+            [
+                self.available_results,
+                hr,
+                self.results_stack,
+            ],
+            # layout=Layout(
+            #     width="100%",
+            #     grid_template_columns="150px auto",
+            #     grid_template_areas=""" "available-results selected-results_stack" """,
+            #     border="0px solid black",
+            # ),
         )
 
     def add_result(self, results: _Results):

{sclab-0.3.1 → sclab-0.3.2}/src/sclab/examples/processor_steps/_differential_expression.py

@@ -25,7 +25,7 @@ class DifferentialExpressionResults(VBox):
 
     def __init__(self, dataset: SCLabDataset):
         self.dataset = dataset
-        self.result_selector = Dropdown()
+        self.result_selector = Dropdown(description="Analysis Name")
         self.group_selector = ToggleButtons()
         self.table_output = Output()
 
@@ -198,6 +198,7 @@ class DifferentialExpression(ProcessorStepBase):
             reference=reference,
             layer=layer,
             key_added=key_added,
+            pts=True,
         )
 
         self.results.sync_results_list(focus_result=key_added)