scikit-surgeryvtk 2.2.1__tar.gz → 2.2.2__tar.gz

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Files changed (72) hide show
  1. {scikit-surgeryvtk-2.2.1/scikit_surgeryvtk.egg-info → scikit-surgeryvtk-2.2.2}/PKG-INFO +1 -1
  2. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2/scikit_surgeryvtk.egg-info}/PKG-INFO +1 -1
  3. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/_version.py +3 -3
  4. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/widgets/vtk_rendering_generator.py +29 -4
  5. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/LICENSE +0 -0
  6. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/MANIFEST.in +0 -0
  7. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/README.rst +0 -0
  8. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/scikit_surgeryvtk.egg-info/SOURCES.txt +0 -0
  9. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/scikit_surgeryvtk.egg-info/dependency_links.txt +0 -0
  10. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/scikit_surgeryvtk.egg-info/requires.txt +0 -0
  11. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/scikit_surgeryvtk.egg-info/top_level.txt +0 -0
  12. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/setup.cfg +0 -0
  13. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/setup.py +0 -0
  14. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/__init__.py +0 -0
  15. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/camera/__init__.py +0 -0
  16. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/camera/vtk_camera_model.py +0 -0
  17. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/models/__init__.py +0 -0
  18. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/models/outline_render.py +0 -0
  19. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/models/surface_model_loader.py +0 -0
  20. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/models/voxelise.py +0 -0
  21. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/models/vtk_base_actor.py +0 -0
  22. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/models/vtk_base_model.py +0 -0
  23. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/models/vtk_cylinder_model.py +0 -0
  24. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/models/vtk_grid_model.py +0 -0
  25. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/models/vtk_image_model.py +0 -0
  26. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/models/vtk_point_model.py +0 -0
  27. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/models/vtk_sphere_model.py +0 -0
  28. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/models/vtk_surface_model.py +0 -0
  29. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/models/vtk_surface_model_directory_loader.py +0 -0
  30. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/models/vtk_tube_model.py +0 -0
  31. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/text/__init__.py +0 -0
  32. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/text/text_overlay.py +0 -0
  33. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/utils/__init__.py +0 -0
  34. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/utils/matrix_utils.py +0 -0
  35. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/utils/platform_utils.py +0 -0
  36. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/utils/polydata_utils.py +0 -0
  37. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/utils/projection_utils.py +0 -0
  38. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/widgets/__init__.py +0 -0
  39. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/widgets/vtk_base_calibrated_window.py +0 -0
  40. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/widgets/vtk_interlaced_stereo_window.py +0 -0
  41. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/widgets/vtk_lus_simulator.py +0 -0
  42. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/widgets/vtk_overlay_window.py +0 -0
  43. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/widgets/vtk_reslice_widget.py +0 -0
  44. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/widgets/vtk_zbuffer_window.py +0 -0
  45. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/tests/camera/__init__.py +0 -0
  46. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/tests/camera/test_liver_overlay.py +0 -0
  47. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/tests/camera/test_vtk_camera_model.py +0 -0
  48. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/tests/models/__init__.py +0 -0
  49. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/tests/models/test_surface_model_loader.py +0 -0
  50. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/tests/models/test_voxelise.py +0 -0
  51. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/tests/models/test_vtk_cylinder_model.py +0 -0
  52. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/tests/models/test_vtk_image_model.py +0 -0
  53. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/tests/models/test_vtk_point_model.py +0 -0
  54. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/tests/models/test_vtk_sphere_model.py +0 -0
  55. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/tests/models/test_vtk_surface_model.py +0 -0
  56. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/tests/models/test_vtk_surface_model_directory_loader.py +0 -0
  57. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/tests/models/test_vtk_tube_model.py +0 -0
  58. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/tests/models/test_vtk_unstructured_grid.py +0 -0
  59. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/tests/utils/__init__.py +0 -0
  60. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/tests/utils/test_matrix_utills.py +0 -0
  61. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/tests/utils/test_polydata_utils.py +0 -0
  62. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/tests/utils/test_projection_utils.py +0 -0
  63. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/tests/widgets/__init__.py +0 -0
  64. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/tests/widgets/test_interlaced_stereo_window.py +0 -0
  65. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/tests/widgets/test_lus_simulator.py +0 -0
  66. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/tests/widgets/test_rendering_generator.py +0 -0
  67. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/tests/widgets/test_vtk_overlay_window.py +0 -0
  68. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/tests/widgets/test_vtk_overlay_window_5_layers.py +0 -0
  69. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/tests/widgets/test_vtk_overlay_window_with_outlines.py +0 -0
  70. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/tests/widgets/test_vtk_reslice.py +0 -0
  71. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/tests/widgets/test_vtkzbuffer_window.py +0 -0
  72. {scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/versioneer.py +0 -0
{scikit-surgeryvtk-2.2.1/scikit_surgeryvtk.egg-info → scikit-surgeryvtk-2.2.2}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
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  Name: scikit-surgeryvtk
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- Version: 2.2.1
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+ Version: 2.2.2
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  Summary: scikit-surgeryvtk uses VTK for Image Guided Surgery applications
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  Home-page: https://github.com/SciKit-Surgery/scikit-surgeryvtk
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  Author: Thomas Dowrick
{scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2/scikit_surgeryvtk.egg-info}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
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  Name: scikit-surgeryvtk
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- Version: 2.2.1
3
+ Version: 2.2.2
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  Summary: scikit-surgeryvtk uses VTK for Image Guided Surgery applications
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  Home-page: https://github.com/SciKit-Surgery/scikit-surgeryvtk
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  Author: Thomas Dowrick
{scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/_version.py RENAMED
@@ -8,11 +8,11 @@ import json
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8
 
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  version_json = '''
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  {
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- "date": "2025-02-01T18:50:17+0000",
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+ "date": "2025-02-06T19:49:32+0000",
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  "dirty": false,
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  "error": null,
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- "full-revisionid": "119e31c45b56987df528bd7ce96be2e39b0491bc",
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- "version": "2.2.1"
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+ "full-revisionid": "eb6b79982896218afd6553bbfa1f339dd5a34594",
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+ "version": "2.2.2"
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  }
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  ''' # END VERSION_JSON
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{scikit-surgeryvtk-2.2.1 → scikit-surgeryvtk-2.2.2}/sksurgeryvtk/widgets/vtk_rendering_generator.py RENAMED
@@ -76,9 +76,11 @@ class VTKRenderingGenerator(QtWidgets.QWidget):
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  )
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  self.overlay.set_video_image(self.img)
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  self.overlay.add_vtk_models(self.model_loader.get_surface_models())
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+ self.clip_near = clipping_range[0]
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+ self.clip_far = clipping_range[1]
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  self.intrinsics = np.loadtxt(intrinsic_file, dtype=float)
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- self.overlay.set_camera_matrix(self.intrinsics)
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+ self.setup_intrinsics()
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84
 
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  self.left_camera_to_world = np.eye(4)
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  self.camera_to_world = np.eye(4)
@@ -86,9 +88,7 @@ class VTKRenderingGenerator(QtWidgets.QWidget):
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  self.setup_camera_extrinsics(camera_to_world, left_to_right)
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  self.layout.addWidget(self.overlay)
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- # self.overlay.show()
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  self.overlay.Initialize()
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- # self.overlay.Start()
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  def closeEvent(self, QCloseEvent):
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  super().closeEvent(QCloseEvent)
@@ -101,7 +101,9 @@ class VTKRenderingGenerator(QtWidgets.QWidget):
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  :param minimum: minimum in millimetres
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  :param maximum: maximum in millimetres
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  """
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- self.overlay.set_clipping_range(minimum, maximum)
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+ self.clip_near = minimum
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+ self.clip_far = maximum
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+ self.overlay.set_clipping_range(self.clip_near, self.clip_far)
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106
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  def set_smoothing(self, sigma, window_size):
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  """
@@ -113,6 +115,29 @@ class VTKRenderingGenerator(QtWidgets.QWidget):
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  self.gaussian_sigma = sigma
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  self.gaussian_window_size = window_size
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118
+ def setup_intrinsics(self):
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+ """
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+ Set the intrinsics of the foreground vtkCamera.
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+ """
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+ f_x = self.intrinsics[0, 0]
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+ c_x = self.intrinsics[0, 2]
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+ f_y = self.intrinsics[1, 1]
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+ c_y = self.intrinsics[1, 2]
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+ width, height = self.img.shape[1], self.img.shape[0]
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+
128
+ ren = self.overlay.get_renderer(layer=1)
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+ cam = ren.GetActiveCamera()
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+ cm.set_camera_intrinsics(ren,
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+ cam,
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+ width,
133
+ height,
134
+ f_x,
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+ f_y,
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+ c_x,
137
+ c_y,
138
+ self.clip_near,
139
+ self.clip_far)
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+
116
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  def setup_camera_extrinsics(self,
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142
  camera_to_world,
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143
  left_to_right=None