scMultiChat 0.1.0__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (46) hide show
  1. scmultichat-0.1.0/MANIFEST.in +1 -0
  2. scmultichat-0.1.0/MultiChat/Analysis/Intra_strength.py +1758 -0
  3. scmultichat-0.1.0/MultiChat/Analysis/Processing.py +152 -0
  4. scmultichat-0.1.0/MultiChat/Analysis/__init__.py +2 -0
  5. scmultichat-0.1.0/MultiChat/Heterogeneous_g_emb/__init__.py +13 -0
  6. scmultichat-0.1.0/MultiChat/Heterogeneous_g_emb/_settings.py +156 -0
  7. scmultichat-0.1.0/MultiChat/Heterogeneous_g_emb/_utils.py +143 -0
  8. scmultichat-0.1.0/MultiChat/Heterogeneous_g_emb/_version.py +3 -0
  9. scmultichat-0.1.0/MultiChat/Heterogeneous_g_emb/plotting/__init__.py +19 -0
  10. scmultichat-0.1.0/MultiChat/Heterogeneous_g_emb/plotting/_palettes.py +180 -0
  11. scmultichat-0.1.0/MultiChat/Heterogeneous_g_emb/plotting/_plot.py +1498 -0
  12. scmultichat-0.1.0/MultiChat/Heterogeneous_g_emb/plotting/_post_training.py +742 -0
  13. scmultichat-0.1.0/MultiChat/Heterogeneous_g_emb/plotting/_utils.py +103 -0
  14. scmultichat-0.1.0/MultiChat/Heterogeneous_g_emb/preprocessing/__init__.py +26 -0
  15. scmultichat-0.1.0/MultiChat/Heterogeneous_g_emb/preprocessing/_general.py +91 -0
  16. scmultichat-0.1.0/MultiChat/Heterogeneous_g_emb/preprocessing/_pca.py +182 -0
  17. scmultichat-0.1.0/MultiChat/Heterogeneous_g_emb/preprocessing/_qc.py +727 -0
  18. scmultichat-0.1.0/MultiChat/Heterogeneous_g_emb/preprocessing/_utils.py +60 -0
  19. scmultichat-0.1.0/MultiChat/Heterogeneous_g_emb/preprocessing/_variable_genes.py +82 -0
  20. scmultichat-0.1.0/MultiChat/Heterogeneous_g_emb/readwrite.py +250 -0
  21. scmultichat-0.1.0/MultiChat/Heterogeneous_g_emb/tools/__init__.py +23 -0
  22. scmultichat-0.1.0/MultiChat/Heterogeneous_g_emb/tools/_gene_scores.py +346 -0
  23. scmultichat-0.1.0/MultiChat/Heterogeneous_g_emb/tools/_general.py +71 -0
  24. scmultichat-0.1.0/MultiChat/Heterogeneous_g_emb/tools/_integration.py +197 -0
  25. scmultichat-0.1.0/MultiChat/Heterogeneous_g_emb/tools/_pbg.py +1184 -0
  26. scmultichat-0.1.0/MultiChat/Heterogeneous_g_emb/tools/_post_training.py +919 -0
  27. scmultichat-0.1.0/MultiChat/Heterogeneous_g_emb/tools/_umap.py +58 -0
  28. scmultichat-0.1.0/MultiChat/Heterogeneous_g_emb/tools/_utils.py +253 -0
  29. scmultichat-0.1.0/MultiChat/Model/Layers.py +116 -0
  30. scmultichat-0.1.0/MultiChat/Model/__init__.py +3 -0
  31. scmultichat-0.1.0/MultiChat/Model/model_training.py +166 -0
  32. scmultichat-0.1.0/MultiChat/Model/modules.py +93 -0
  33. scmultichat-0.1.0/MultiChat/Model/utilities.py +234 -0
  34. scmultichat-0.1.0/MultiChat/Plot/Visualization.py +470 -0
  35. scmultichat-0.1.0/MultiChat/Plot/__init__.py +1 -0
  36. scmultichat-0.1.0/MultiChat/__init__.py +12 -0
  37. scmultichat-0.1.0/PKG-INFO +156 -0
  38. scmultichat-0.1.0/pyproject.toml +3 -0
  39. scmultichat-0.1.0/requirements.txt +144 -0
  40. scmultichat-0.1.0/scMultiChat.egg-info/PKG-INFO +156 -0
  41. scmultichat-0.1.0/scMultiChat.egg-info/SOURCES.txt +44 -0
  42. scmultichat-0.1.0/scMultiChat.egg-info/dependency_links.txt +1 -0
  43. scmultichat-0.1.0/scMultiChat.egg-info/requires.txt +144 -0
  44. scmultichat-0.1.0/scMultiChat.egg-info/top_level.txt +1 -0
  45. scmultichat-0.1.0/setup.cfg +4 -0
  46. scmultichat-0.1.0/setup.py +16 -0
scmultichat-0.1.0/MANIFEST.in ADDED
@@ -0,0 +1 @@
1
+ include requirements.txt