sapiopycommons 2024.8.27a310__tar.gz → 2024.8.28a313__tar.gz

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  1. {sapiopycommons-2024.8.27a310 → sapiopycommons-2024.8.28a313}/.gitignore +0 -2
  2. {sapiopycommons-2024.8.27a310 → sapiopycommons-2024.8.28a313}/PKG-INFO +2 -4
  3. {sapiopycommons-2024.8.27a310 → sapiopycommons-2024.8.28a313}/README.md +0 -1
  4. {sapiopycommons-2024.8.27a310 → sapiopycommons-2024.8.28a313}/pyproject.toml +2 -2
  5. {sapiopycommons-2024.8.27a310 → sapiopycommons-2024.8.28a313}/src/sapiopycommons/callbacks/callback_util.py +69 -407
  6. {sapiopycommons-2024.8.27a310 → sapiopycommons-2024.8.28a313}/src/sapiopycommons/chem/IndigoMolecules.py +0 -1
  7. {sapiopycommons-2024.8.27a310 → sapiopycommons-2024.8.28a313}/src/sapiopycommons/chem/Molecules.py +0 -1
  8. {sapiopycommons-2024.8.27a310 → sapiopycommons-2024.8.28a313}/src/sapiopycommons/datatype/attachment_util.py +10 -11
  9. {sapiopycommons-2024.8.27a310 → sapiopycommons-2024.8.28a313}/src/sapiopycommons/eln/experiment_handler.py +48 -209
  10. {sapiopycommons-2024.8.27a310 → sapiopycommons-2024.8.28a313}/src/sapiopycommons/files/complex_data_loader.py +4 -5
  11. {sapiopycommons-2024.8.27a310 → sapiopycommons-2024.8.28a313}/src/sapiopycommons/files/file_bridge.py +24 -31
  12. {sapiopycommons-2024.8.27a310 → sapiopycommons-2024.8.28a313}/src/sapiopycommons/files/file_data_handler.py +5 -2
  13. {sapiopycommons-2024.8.27a310 → sapiopycommons-2024.8.28a313}/src/sapiopycommons/files/file_util.py +10 -50
  14. {sapiopycommons-2024.8.27a310 → sapiopycommons-2024.8.28a313}/src/sapiopycommons/files/file_validator.py +6 -92
  15. {sapiopycommons-2024.8.27a310 → sapiopycommons-2024.8.28a313}/src/sapiopycommons/files/file_writer.py +15 -44
  16. sapiopycommons-2024.8.28a313/src/sapiopycommons/general/aliases.py +82 -0
  17. sapiopycommons-2024.8.28a313/src/sapiopycommons/general/custom_report_util.py +90 -0
  18. {sapiopycommons-2024.8.27a310 → sapiopycommons-2024.8.28a313}/src/sapiopycommons/general/popup_util.py +0 -17
  19. {sapiopycommons-2024.8.27a310 → sapiopycommons-2024.8.28a313}/src/sapiopycommons/general/time_util.py +0 -40
  20. {sapiopycommons-2024.8.27a310 → sapiopycommons-2024.8.28a313}/src/sapiopycommons/processtracking/endpoints.py +22 -22
  21. {sapiopycommons-2024.8.27a310 → sapiopycommons-2024.8.28a313}/src/sapiopycommons/recordmodel/record_handler.py +97 -481
  22. {sapiopycommons-2024.8.27a310 → sapiopycommons-2024.8.28a313}/src/sapiopycommons/rules/eln_rule_handler.py +25 -34
  23. {sapiopycommons-2024.8.27a310 → sapiopycommons-2024.8.28a313}/src/sapiopycommons/rules/on_save_rule_handler.py +31 -34
  24. {sapiopycommons-2024.8.27a310 → sapiopycommons-2024.8.28a313}/src/sapiopycommons/webhook/webhook_handlers.py +26 -147
  25. sapiopycommons-2024.8.27a310/src/sapiopycommons/customreport/column_builder.py +0 -60
  26. sapiopycommons-2024.8.27a310/src/sapiopycommons/customreport/custom_report_builder.py +0 -125
  27. sapiopycommons-2024.8.27a310/src/sapiopycommons/customreport/term_builder.py +0 -299
  28. sapiopycommons-2024.8.27a310/src/sapiopycommons/eln/experiment_report_util.py +0 -118
  29. sapiopycommons-2024.8.27a310/src/sapiopycommons/files/file_bridge_handler.py +0 -340
  30. sapiopycommons-2024.8.27a310/src/sapiopycommons/general/accession_service.py +0 -375
  31. sapiopycommons-2024.8.27a310/src/sapiopycommons/general/aliases.py +0 -226
  32. sapiopycommons-2024.8.27a310/src/sapiopycommons/general/audit_log.py +0 -196
  33. sapiopycommons-2024.8.27a310/src/sapiopycommons/general/custom_report_util.py +0 -264
  34. sapiopycommons-2024.8.27a310/src/sapiopycommons/general/sapio_links.py +0 -50
  35. sapiopycommons-2024.8.27a310/src/sapiopycommons/multimodal/multimodal.py +0 -146
  36. sapiopycommons-2024.8.27a310/src/sapiopycommons/multimodal/multimodal_data.py +0 -486
  37. sapiopycommons-2024.8.27a310/src/sapiopycommons/webhook/__init__.py +0 -0
  38. sapiopycommons-2024.8.27a310/src/sapiopycommons/webhook/webservice_handlers.py +0 -67
  39. sapiopycommons-2024.8.27a310/tests/_do_not_add_init_py_here +0 -0
  40. sapiopycommons-2024.8.27a310/tests/accession_test.py +0 -41
  41. sapiopycommons-2024.8.27a310/tests/bio_reg_test.py +0 -26
  42. sapiopycommons-2024.8.27a310/tests/chem_test.py +0 -229
  43. sapiopycommons-2024.8.27a310/tests/data_type_models.py +0 -37332
  44. sapiopycommons-2024.8.27a310/tests/kappa.chains.fasta +0 -45
  45. sapiopycommons-2024.8.27a310/tests/mafft_test.py +0 -66
  46. sapiopycommons-2024.8.27a310/tests/test.gb +0 -124
  47. {sapiopycommons-2024.8.27a310 → sapiopycommons-2024.8.28a313}/LICENSE +0 -0
  48. {sapiopycommons-2024.8.27a310 → sapiopycommons-2024.8.28a313}/src/sapiopycommons/__init__.py +0 -0
  49. {sapiopycommons-2024.8.27a310 → sapiopycommons-2024.8.28a313}/src/sapiopycommons/callbacks/__init__.py +0 -0
  50. {sapiopycommons-2024.8.27a310 → sapiopycommons-2024.8.28a313}/src/sapiopycommons/chem/__init__.py +0 -0
  51. {sapiopycommons-2024.8.27a310/src/sapiopycommons/customreport → sapiopycommons-2024.8.28a313/src/sapiopycommons/datatype}/__init__.py +0 -0
  52. {sapiopycommons-2024.8.27a310/src/sapiopycommons/datatype → sapiopycommons-2024.8.28a313/src/sapiopycommons/eln}/__init__.py +0 -0
  53. {sapiopycommons-2024.8.27a310 → sapiopycommons-2024.8.28a313}/src/sapiopycommons/eln/plate_designer.py +0 -0
  54. {sapiopycommons-2024.8.27a310/src/sapiopycommons/eln → sapiopycommons-2024.8.28a313/src/sapiopycommons/files}/__init__.py +0 -0
  55. {sapiopycommons-2024.8.27a310/src/sapiopycommons/files → sapiopycommons-2024.8.28a313/src/sapiopycommons/general}/__init__.py +0 -0
  56. {sapiopycommons-2024.8.27a310 → sapiopycommons-2024.8.28a313}/src/sapiopycommons/general/exceptions.py +0 -0
  57. {sapiopycommons-2024.8.27a310 → sapiopycommons-2024.8.28a313}/src/sapiopycommons/general/storage_util.py +0 -0
  58. {sapiopycommons-2024.8.27a310/src/sapiopycommons/general → sapiopycommons-2024.8.28a313/src/sapiopycommons/processtracking}/__init__.py +0 -0
  59. {sapiopycommons-2024.8.27a310/src/sapiopycommons/processtracking → sapiopycommons-2024.8.28a313/src/sapiopycommons/recordmodel}/__init__.py +0 -0
  60. {sapiopycommons-2024.8.27a310/src/sapiopycommons/recordmodel → sapiopycommons-2024.8.28a313/src/sapiopycommons/rules}/__init__.py +0 -0
  61. {sapiopycommons-2024.8.27a310/src/sapiopycommons/rules → sapiopycommons-2024.8.28a313/src/sapiopycommons/webhook}/__init__.py +0 -0
@@ -6,5 +6,3 @@
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  **/*.versionsBackup
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  **/target
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  /sapiopycommons/sapiopycommons.egg-info/
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- /sapiopycommons/dist**
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- /.pydevproject
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.3
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  Name: sapiopycommons
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- Version: 2024.8.27a310
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+ Version: 2024.8.28a313
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  Summary: Official Sapio Python API Utilities Package
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  Project-URL: Homepage, https://github.com/sapiosciences
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  Author-email: Jonathan Steck <jsteck@sapiosciences.com>, Yechen Qiao <yqiao@sapiosciences.com>
@@ -17,8 +17,7 @@ Classifier: Programming Language :: Python :: 3.10
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  Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
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  Classifier: Topic :: Software Development :: Libraries :: Python Modules
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  Requires-Python: >=3.10
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- Requires-Dist: databind>=4.5
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- Requires-Dist: sapiopylib>=2024.5.24.210
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+ Requires-Dist: sapiopylib>=2023.12.13.174
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  Description-Content-Type: text/markdown
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@@ -51,7 +50,6 @@ This license does not provide any rights to use any other copyrighted artifacts
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  ## Dependencies
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  The following dependencies are required for this package:
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  - [sapiopylib - The official Sapio Informatics Platform Python API package.](https://pypi.org/project/sapiopylib/)
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- - [databind - Databind is a library inspired by jackson-databind to de-/serialize Python dataclasses.](https://pypi.org/project/databind/)
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  ## Getting Help
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  If you have a support contract with Sapio Sciences, please use our [technical support channels](https://sapio-sciences.atlassian.net/servicedesk/customer/portals).
@@ -28,7 +28,6 @@ This license does not provide any rights to use any other copyrighted artifacts
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  ## Dependencies
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  The following dependencies are required for this package:
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  - [sapiopylib - The official Sapio Informatics Platform Python API package.](https://pypi.org/project/sapiopylib/)
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- - [databind - Databind is a library inspired by jackson-databind to de-/serialize Python dataclasses.](https://pypi.org/project/databind/)
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  ## Getting Help
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  If you have a support contract with Sapio Sciences, please use our [technical support channels](https://sapio-sciences.atlassian.net/servicedesk/customer/portals).
@@ -4,7 +4,7 @@ build-backend = "hatchling.build"
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  [project]
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  name = "sapiopycommons"
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- version='2024.08.27a310'
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+ version='2024.08.28a313'
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  authors = [
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  { name="Jonathan Steck", email="jsteck@sapiosciences.com" },
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  { name="Yechen Qiao", email="yqiao@sapiosciences.com" },
@@ -14,7 +14,7 @@ license = "MPL-2.0"
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  readme = "README.md"
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  requires-python = ">=3.10"
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  dependencies = [
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- 'sapiopylib>=2024.5.24.210', 'databind>=4.5'
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+ 'sapiopylib>=2023.12.13.174'
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  ]
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  classifiers = [
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  "Intended Audience :: Developers",