samplesheet-parser 0.3.1__tar.gz → 0.3.2__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (65) hide show
  1. samplesheet_parser-0.3.2/.zenodo.json +30 -0
  2. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/CHANGELOG.md +8 -0
  3. samplesheet_parser-0.3.2/CITATION.cff +25 -0
  4. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/PKG-INFO +2 -2
  5. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/README.md +1 -1
  6. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/pyproject.toml +1 -1
  7. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/.github/workflows/ci.yml +0 -0
  8. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/.github/workflows/copilot-instructions.md +0 -0
  9. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/.gitignore +0 -0
  10. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/CONTRIBUTING.md +0 -0
  11. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/LICENSE +0 -0
  12. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/examples/demo_merger.py +0 -0
  13. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/examples/parse_examples.py +0 -0
  14. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/examples/sample_sheets/ProjectAlpha_SampleSheet.csv +0 -0
  15. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/examples/sample_sheets/ProjectBeta_SampleSheet.csv +0 -0
  16. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/examples/sample_sheets/ProjectDelta_SampleSheet_collision.csv +0 -0
  17. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/examples/sample_sheets/ProjectGamma_SampleSheet.csv +0 -0
  18. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/examples/sample_sheets/README.md +0 -0
  19. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/examples/sample_sheets/combined_clean.csv +0 -0
  20. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/examples/sample_sheets/combined_collision_forced.csv +0 -0
  21. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/examples/sample_sheets/combined_mixed_formats.csv +0 -0
  22. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/examples/sample_sheets/v1_dual_index.csv +0 -0
  23. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/examples/sample_sheets/v1_multi_lane.csv +0 -0
  24. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/examples/sample_sheets/v1_single_index.csv +0 -0
  25. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/examples/sample_sheets/v1_with_lab_qc_settings.csv +0 -0
  26. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/examples/sample_sheets/v1_with_manifests.csv +0 -0
  27. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/examples/sample_sheets/v2_nextseq_single_index.csv +0 -0
  28. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/examples/sample_sheets/v2_novaseq_x_dual_index.csv +0 -0
  29. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/examples/sample_sheets/v2_with_cloud_settings.csv +0 -0
  30. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/examples/sample_sheets/v2_with_index_umi.csv +0 -0
  31. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/examples/sample_sheets/v2_with_pipeline_settings.csv +0 -0
  32. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/examples/sample_sheets/v2_with_read_umi.csv +0 -0
  33. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/images/samplesheet_parser_overview.png +0 -0
  34. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/samplesheet_parser/__init__.py +0 -0
  35. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/samplesheet_parser/cli.py +0 -0
  36. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/samplesheet_parser/converter.py +0 -0
  37. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/samplesheet_parser/diff.py +0 -0
  38. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/samplesheet_parser/enums.py +0 -0
  39. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/samplesheet_parser/factory.py +0 -0
  40. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/samplesheet_parser/merger.py +0 -0
  41. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/samplesheet_parser/parsers/__init__.py +0 -0
  42. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/samplesheet_parser/parsers/v1.py +0 -0
  43. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/samplesheet_parser/parsers/v2.py +0 -0
  44. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/samplesheet_parser/validators.py +0 -0
  45. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/samplesheet_parser/writer.py +0 -0
  46. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/scripts/demo_converter.py +0 -0
  47. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/scripts/demo_diff.py +0 -0
  48. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/scripts/demo_writer.py +0 -0
  49. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/tests/__init__.py +0 -0
  50. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/tests/conftest.py +0 -0
  51. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/tests/fixtures/SampleSheet_v1_dual_index.csv +0 -0
  52. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/tests/fixtures/SampleSheet_v2_dual_index.csv +0 -0
  53. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/tests/fixtures/SampleSheet_v2_modified.csv +0 -0
  54. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/tests/test_cli.py +0 -0
  55. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/tests/test_converter.py +0 -0
  56. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/tests/test_diff.py +0 -0
  57. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/tests/test_factory.py +0 -0
  58. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/tests/test_merger.py +0 -0
  59. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/tests/test_parsers/__init__.py +0 -0
  60. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/tests/test_parsers/test_v1.py +0 -0
  61. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/tests/test_parsers/test_v2.py +0 -0
  62. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/tests/test_validators/__init__.py +0 -0
  63. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/tests/test_validators/test_hamming.py +0 -0
  64. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/tests/test_validators/test_validators.py +0 -0
  65. {samplesheet_parser-0.3.1 → samplesheet_parser-0.3.2}/tests/test_writer.py +0 -0
@@ -0,0 +1,30 @@
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+ {
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+ "title": "samplesheet-parser: A Python library for parsing, validating, converting, and merging Illumina SampleSheet V1 and V2 files",
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+ "description": "Open-source Python library providing format auto-detection, bidirectional V1/V2 conversion, structural and index validation, sheet diffing, and cross-project merging for Illumina SampleSheet files.",
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+ "upload_type": "software",
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+ "access_right": "open",
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+ "license": "Apache-2.0",
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+ "version": "0.3.1",
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+ "keywords": [
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+ "bioinformatics", "Illumina", "SampleSheet", "BCLConvert",
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+ "demultiplexing", "genomics", "sequencing", "Python"
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+ ],
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+ "creators": [
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+ {
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+ "name": "Kasaraneni, Chaitanya Krishna",
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+ "orcid": "0000-0001-5792-1095"
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+ }
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+ ],
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+ "related_identifiers": [
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+ {
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+ "identifier": "https://github.com/chaitanyakasaraneni/samplesheet-parser",
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+ "relation": "isSupplementTo",
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+ "scheme": "url"
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+ },
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+ {
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+ "identifier": "https://pypi.org/project/samplesheet-parser/",
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+ "relation": "isIdenticalTo",
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+ "scheme": "url"
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+ }
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+ ]
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+ }
@@ -6,6 +6,14 @@ The format follows [Keep a Changelog](https://keepachangelog.com/en/1.0.0/).
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  ---
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+ ## [0.3.2] - 2026-03-12
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+
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+ ### Added
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+ - `.zenodo.json` metadata file for automatic Zenodo archival and DOI
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+ minting on GitHub releases
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+ - `CITATION.cff` file enabling GitHub's "Cite this repository" button
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+ and standardized software citation for downstream users
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+
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  ## [0.3.1] - 2026-03-11
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  ### Fixed
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+ cff-version: 1.2.0
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+ message: "If you use this software, please cite it as below."
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+ type: software
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+ title: "samplesheet-parser"
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+ version: 0.3.2
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+ date-released: 2026-03-12
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+ license: Apache-2.0
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+ url: "https://github.com/chaitanyakasaraneni/samplesheet-parser"
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+ repository-code: "https://github.com/chaitanyakasaraneni/samplesheet-parser"
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+ abstract: >
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+ A Python library for parsing, validating, converting, and merging
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+ Illumina SampleSheet V1 and V2 files for BCLConvert and bcl2fastq.
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+ keywords:
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+ - bioinformatics
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+ - Illumina
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+ - SampleSheet
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+ - BCLConvert
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+ - demultiplexing
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+ - genomics
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+ - Python
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+ authors:
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+ - family-names: Kasaraneni
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+ given-names: Chaitanya Krishna
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+ email: kc.kasaraneni@gmail.com
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+ orcid: "https://orcid.org/0000-0001-5792-1095"
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: samplesheet-parser
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- Version: 0.3.1
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+ Version: 0.3.2
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  Summary: Format-agnostic parser for Illumina SampleSheet.csv files — supports IEM V1 and BCLConvert V2
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  Project-URL: Homepage, https://github.com/chaitanyakasaraneni/samplesheet-parser
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  Project-URL: Documentation, https://illumina-samplesheet.readthedocs.io
@@ -584,7 +584,7 @@ See [CONTRIBUTING.md](CONTRIBUTING.md) for the full local testing guide and PR c
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  title = {samplesheet-parser: Format-agnostic parser for Illumina SampleSheet.csv},
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  year = {2026},
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  url = {https://github.com/chaitanyakasaraneni/samplesheet-parser},
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- version = {0.3.1}
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+ version = {0.3.2}
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  }
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  ```
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  title = {samplesheet-parser: Format-agnostic parser for Illumina SampleSheet.csv},
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  year = {2026},
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  url = {https://github.com/chaitanyakasaraneni/samplesheet-parser},
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- version = {0.3.1}
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+ version = {0.3.2}
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  }
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  ```
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@@ -4,7 +4,7 @@ build-backend = "hatchling.build"
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  [project]
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  name = "samplesheet-parser"
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- version = "0.3.1"
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+ version = "0.3.2"
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  description = "Format-agnostic parser for Illumina SampleSheet.csv files — supports IEM V1 and BCLConvert V2"
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  readme = "README.md"
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  license = { file = "LICENSE" }