rxiv-maker 1.18.3__tar.gz → 1.18.4__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
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  1. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/CHANGELOG.md +27 -2
  2. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/PKG-INFO +11 -5
  3. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/README.md +10 -4
  4. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/__version__.py +1 -1
  5. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/.gitignore +0 -0
  6. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/LICENSE +0 -0
  7. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/pyproject.toml +0 -0
  8. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/docs/api/README.md +0 -0
  9. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/docs/api/index.md +0 -0
  10. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/logo/logo-rxiv-maker.afdesign +0 -0
  11. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/logo/logo-rxiv-maker.png +0 -0
  12. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/logo/logo-rxiv-maker.svg +0 -0
  13. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/__init__.py +0 -0
  14. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/__init__.py +0 -0
  15. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/__main__.py +0 -0
  16. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/commands/__init__.py +0 -0
  17. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/commands/arxiv.py +0 -0
  18. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/commands/bibliography.py +0 -0
  19. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/commands/build.py +0 -0
  20. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/commands/cache_management.py +0 -0
  21. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/commands/changelog.py +0 -0
  22. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/commands/check_installation.py +0 -0
  23. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/commands/clean.py +0 -0
  24. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/commands/completion.py +0 -0
  25. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/commands/config.py +0 -0
  26. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/commands/create_repo.py +0 -0
  27. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/commands/docx.py +0 -0
  28. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/commands/figures.py +0 -0
  29. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/commands/get_rxiv_preprint.py +0 -0
  30. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/commands/init.py +0 -0
  31. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/commands/install_deps.py +0 -0
  32. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/commands/repo_init.py +0 -0
  33. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/commands/repos.py +0 -0
  34. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/commands/repos_search.py +0 -0
  35. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/commands/setup.py +0 -0
  36. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/commands/track_changes.py +0 -0
  37. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/commands/upgrade.py +0 -0
  38. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/commands/validate.py +0 -0
  39. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/commands/version.py +0 -0
  40. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/framework/__init__.py +0 -0
  41. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/framework/base.py +0 -0
  42. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/framework/cache_commands.py +0 -0
  43. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/framework/config_commands.py +0 -0
  44. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/framework/content_commands.py +0 -0
  45. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/framework/decorators.py +0 -0
  46. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/framework/utility_commands.py +0 -0
  47. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/framework/workflow_commands.py +0 -0
  48. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/framework.py +0 -0
  49. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/interactive.py +0 -0
  50. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/interactive_prompts.py +0 -0
  51. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/cli/main.py +0 -0
  52. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/config/defaults.py +0 -0
  53. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/config/validator.py +0 -0
  54. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/converters/__init__.py +0 -0
  55. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/converters/citation_processor.py +0 -0
  56. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/converters/code_processor.py +0 -0
  57. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/converters/comment_processor.py +0 -0
  58. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/converters/custom_command_processor.py +0 -0
  59. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/converters/figure_processor.py +0 -0
  60. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/converters/html_processor.py +0 -0
  61. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/converters/list_processor.py +0 -0
  62. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/converters/math_processor.py +0 -0
  63. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/converters/md2tex.py +0 -0
  64. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/converters/python_executor.py +0 -0
  65. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/converters/section_processor.py +0 -0
  66. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/converters/supplementary_note_processor.py +0 -0
  67. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/converters/table_processor.py +0 -0
  68. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/converters/text_formatters.py +0 -0
  69. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/converters/types.py +0 -0
  70. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/converters/url_processor.py +0 -0
  71. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/core/cache/__init__.py +0 -0
  72. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/core/cache/advanced_cache.py +0 -0
  73. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/core/cache/bibliography_cache.py +0 -0
  74. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/core/cache/cache_utils.py +0 -0
  75. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/core/cache/doi_cache.py +0 -0
  76. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/core/cache/secure_cache_utils.py +0 -0
  77. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/core/content_processor.py +0 -0
  78. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/core/environment_bootstrap.py +0 -0
  79. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/core/environment_manager.py +0 -0
  80. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/core/error_codes.py +0 -0
  81. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/core/error_recovery.py +0 -0
  82. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/core/logging_config.py +0 -0
  83. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/core/managers/__init__.py +0 -0
  84. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/core/managers/cache_manager.py +0 -0
  85. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/core/managers/config_manager.py +0 -0
  86. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/core/managers/dependency_manager.py +0 -0
  87. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/core/managers/execution_manager.py +0 -0
  88. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/core/managers/file_manager.py +0 -0
  89. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/core/managers/install_manager.py +0 -0
  90. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/core/managers/state_manager.py +0 -0
  91. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/core/managers/unified_config_manager.py +0 -0
  92. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/core/managers/validation_manager.py +0 -0
  93. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/core/managers/workflow_manager.py +0 -0
  94. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/core/path_manager.py +0 -0
  95. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/core/progress_framework.py +0 -0
  96. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/core/repo_config.py +0 -0
  97. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/core/repository.py +0 -0
  98. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/core/session_optimizer.py +0 -0
  99. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/core/validation_framework.py +0 -0
  100. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/data/tips.yaml +0 -0
  101. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/engines/__init__.py +0 -0
  102. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/engines/operations/__init__.py +0 -0
  103. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/engines/operations/add_bibliography.py +0 -0
  104. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/engines/operations/build_manager.py +0 -0
  105. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/engines/operations/cleanup.py +0 -0
  106. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/engines/operations/fix_bibliography.py +0 -0
  107. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/engines/operations/generate_docs.py +0 -0
  108. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/engines/operations/generate_figures.py +0 -0
  109. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/engines/operations/generate_preprint.py +0 -0
  110. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/engines/operations/prepare_arxiv.py +0 -0
  111. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/engines/operations/setup_environment.py +0 -0
  112. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/engines/operations/track_changes.py +0 -0
  113. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/engines/operations/validate.py +0 -0
  114. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/engines/operations/validate_pdf.py +0 -0
  115. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/exporters/__init__.py +0 -0
  116. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/exporters/docx_citation_mapper.py +0 -0
  117. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/exporters/docx_content_processor.py +0 -0
  118. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/exporters/docx_exporter.py +0 -0
  119. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/exporters/docx_writer.py +0 -0
  120. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/install/__init__.py +0 -0
  121. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/install/dependency_handlers/__init__.py +0 -0
  122. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/install/dependency_handlers/latex.py +0 -0
  123. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/install/dependency_handlers/r_lang.py +0 -0
  124. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/install/dependency_handlers/system_libs.py +0 -0
  125. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/install/platform_installers/__init__.py +0 -0
  126. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/install/platform_installers/base.py +0 -0
  127. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/install/platform_installers/linux.py +0 -0
  128. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/install/platform_installers/macos.py +0 -0
  129. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/install/platform_installers/windows.py +0 -0
  130. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/install/utils/__init__.py +0 -0
  131. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/install/utils/logging.py +0 -0
  132. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/install/utils/progress.py +0 -0
  133. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/install/utils/verification.py +0 -0
  134. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/manuscript_utils/__init__.py +0 -0
  135. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/manuscript_utils/figure_utils.py +0 -0
  136. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/processors/__init__.py +0 -0
  137. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/processors/author_processor.py +0 -0
  138. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/processors/markdown_preprocessor.py +0 -0
  139. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/processors/template_processor.py +0 -0
  140. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/processors/yaml_processor.py +0 -0
  141. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/rxiv_maker_cli.py +0 -0
  142. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/scripts/__init__.py +0 -0
  143. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/scripts/custom_doc_generator.py +0 -0
  144. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/scripts/validate_manuscript.py +0 -0
  145. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/services/__init__.py +0 -0
  146. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/services/base.py +0 -0
  147. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/services/build_service.py +0 -0
  148. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/services/configuration_service.py +0 -0
  149. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/services/manuscript_service.py +0 -0
  150. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/services/publication_service.py +0 -0
  151. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/services/validation_service.py +0 -0
  152. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/templates/__init__.py +0 -0
  153. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/templates/manager.py +0 -0
  154. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/templates/registry.py +0 -0
  155. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/tex/python_execution_section.tex +0 -0
  156. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/utils/__init__.py +0 -0
  157. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/utils/accent_character_map.py +0 -0
  158. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/utils/author_affiliation_processor.py +0 -0
  159. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/utils/author_name_formatter.py +0 -0
  160. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/utils/bibliography_checksum.py +0 -0
  161. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/utils/bibliography_parser.py +0 -0
  162. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/utils/bst_generator.py +0 -0
  163. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/utils/changelog_parser.py +0 -0
  164. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/utils/citation_range_formatter.py +0 -0
  165. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/utils/citation_utils.py +0 -0
  166. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/utils/comment_filter.py +0 -0
  167. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/utils/dependency_checker.py +0 -0
  168. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/utils/docx_helpers.py +0 -0
  169. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/utils/doi_resolver.py +0 -0
  170. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/utils/email_encoder.py +0 -0
  171. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/utils/figure_checksum.py +0 -0
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  353. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/tests/unit/test_text_formatters.py +0 -0
  354. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/tests/unit/test_text_utils.py +0 -0
  355. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/tests/unit/test_tips.py +0 -0
  356. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/tests/unit/test_title_sync.py +0 -0
  357. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/tests/unit/test_title_sync_validation.py +0 -0
  358. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/tests/unit/test_track_changes.py +0 -0
  359. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/tests/unit/test_trailing_slash_regression.py +0 -0
  360. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/tests/unit/test_upgrade_command.py +0 -0
  361. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/tests/unit/test_url_to_doi.py +0 -0
  362. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/tests/unit/test_utils.py +0 -0
  363. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/tests/unit/test_validate_backticks.py +0 -0
  364. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/tests/unit/test_validate_command_fixed.py +0 -0
  365. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/tests/unit/test_validate_manuscript.py +0 -0
  366. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/tests/unit/test_validation_suite.py +0 -0
  367. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/tests/unit/test_validators.py +0 -0
  368. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/tests/unit/test_yaml_processor.py +0 -0
  369. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/tests/visual/README.md +0 -0
  370. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/tests/visual/figure-positioning/00_CONFIG.yml +0 -0
  371. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/tests/visual/figure-positioning/01_MAIN.md +0 -0
  372. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/tests/visual/figure-positioning/03_REFERENCES.bib +0 -0
  373. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/tests/visual/figure-positioning/FIGURES/Figure__positioning_test.png +0 -0
  374. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/tests/visual/figure-positioning/FIGURES/Figure__positioning_test.py +0 -0
  375. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/tests/visual/figure-positioning/FIGURES/ReadyFig.png +0 -0
  376. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/tests/visual/figure-positioning/FIGURES/ReadyFig.py +0 -0
  377. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/tests/visual/figure-positioning/README.md +0 -0
  378. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/tests/visual/methods-placement/00_CONFIG.yml +0 -0
  379. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/tests/visual/methods-placement/01_MAIN.md +0 -0
  380. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/tests/visual/methods-placement/02_SUPPLEMENTARY_INFO.md +0 -0
  381. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/tests/visual/methods-placement/03_REFERENCES.bib +0 -0
  382. {rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/tests/visual/methods-placement/README.md +0 -0
{rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/CHANGELOG.md RENAMED
@@ -7,6 +7,31 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
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  ## [Unreleased]
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+ ## [1.18.4] - 2026-02-02
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+
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+ ### Documentation
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+
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+ - **Homebrew Formula Workflow Alignment**: Aligned CONTRIBUTING.md with CLAUDE.md automation strategy (#280)
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+ - Prioritized automated `just release rxiv-maker` workflow as recommended method
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+ - Fixed hardcoded version placeholder (`VERSION=1.18.4` → `VERSION=X.Y.Z`)
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+ - Updated path references to use relative paths (`../homebrew-formulas`)
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+ - Added automation context with `just` utility commands reference
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+ - Restored optional `rxiv check-installation` verification command in README
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+
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+ - **Standardized Homebrew Documentation Templates**: Added reusable templates for ecosystem consistency (#281)
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+ - Created `docs/HOMEBREW_FORMULA_TEMPLATE.md` with complete workflow templates
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+ - Created `docs/HOMEBREW_DOCS_CHECKLIST.md` for review and verification
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+ - Includes customization guide and examples for all HenriquesLab packages
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+ - Enables consistent documentation across rxiv-maker, folder2md4llms, and TaskRepo
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+
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+ ### Security
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+
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+ - **Private Repository Reference Removal**: Removed references to private `website-rxiv-maker` repository (#282)
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+ - Updated CHANGELOG.md to reference deployed website (https://rxiv-maker.henriqueslab.org)
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+ - Updated docs/ECOSYSTEM.md architecture diagrams and tables
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+ - Complies with CLAUDE.md security guidelines (line 338)
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+ - Prevents exposure of private repository structure and internal development processes
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+
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  ## [1.18.3] - 2026-01-07
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  ### Added
@@ -1157,10 +1182,10 @@ The new `rxiv upgrade` command provides a seamless upgrade experience by automat
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  - 9 comprehensive unit tests with full coverage
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  ### Changed
1160
- - **📚 Documentation Consolidation**: Migrated installation and first-manuscript guides to [website-rxiv-maker](https://github.com/HenriquesLab/website-rxiv-maker) as single source of truth
1185
+ - **📚 Documentation Consolidation**: Migrated installation and first-manuscript guides to [official documentation website](https://rxiv-maker.henriqueslab.org) as single source of truth
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  - **🔗 Redirect Stubs**: Converted `docs/installation.md` and `docs/first-manuscript.md` to redirect stubs pointing to website
1162
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  - **🎯 Enhanced README**: Improved documentation structure with clearer navigation between user guides and developer resources
1163
- - **🏗️ Ecosystem Clarity**: Added cross-repository links to related projects (docker-rxiv-maker, vscode-rxiv-maker, website-rxiv-maker)
1188
+ - **🏗️ Ecosystem Clarity**: Added cross-repository links to related projects (docker-rxiv-maker, vscode-rxiv-maker)
1164
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  ### Documentation
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  - **📝 Comprehensive Review**: Added detailed `DOCUMENTATION_IMPROVEMENTS.md` summarizing 14 improvements across ecosystem
{rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: rxiv-maker
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- Version: 1.18.3
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+ Version: 1.18.4
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  Summary: Write scientific preprints in Markdown. Generate publication-ready PDFs efficiently.
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  Project-URL: Homepage, https://github.com/HenriquesLab/rxiv-maker
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  Project-URL: Documentation, https://github.com/HenriquesLab/rxiv-maker#readme
@@ -107,16 +107,22 @@ Rxiv-Maker converts enhanced Markdown into professional PDFs with automated figu
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  <summary>🍎 <strong>macOS</strong> (Recommended - includes LaTeX automatically)</summary>
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  ```bash
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- brew tap henriqueslab/formulas
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- brew install rxiv-maker
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- rxiv check-installation
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+ brew install henriqueslab/formulas/rxiv-maker
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  ```
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115
- **Upgrade:**
113
+ **Updating:**
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  ```bash
115
+ brew update
117
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  brew upgrade rxiv-maker
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  ```
119
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119
+ **Verify installation (optional):**
120
+ ```bash
121
+ rxiv check-installation # Verify LaTeX and dependencies
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+ ```
123
+
124
+ **Benefits:** Simple one-command installation, automatic dependency management (Python 3.13, LaTeX, git, gh), easy updates
125
+
120
126
  > **📖 [Homebrew Formula](https://github.com/HenriquesLab/homebrew-formulas)** - Includes Python, LaTeX (MacTeX), and all dependencies
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122
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  </details>
{rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/README.md RENAMED
@@ -29,16 +29,22 @@ Rxiv-Maker converts enhanced Markdown into professional PDFs with automated figu
29
29
  <summary>🍎 <strong>macOS</strong> (Recommended - includes LaTeX automatically)</summary>
30
30
 
31
31
  ```bash
32
- brew tap henriqueslab/formulas
33
- brew install rxiv-maker
34
- rxiv check-installation
32
+ brew install henriqueslab/formulas/rxiv-maker
35
33
  ```
36
34
 
37
- **Upgrade:**
35
+ **Updating:**
38
36
  ```bash
37
+ brew update
39
38
  brew upgrade rxiv-maker
40
39
  ```
41
40
 
41
+ **Verify installation (optional):**
42
+ ```bash
43
+ rxiv check-installation # Verify LaTeX and dependencies
44
+ ```
45
+
46
+ **Benefits:** Simple one-command installation, automatic dependency management (Python 3.13, LaTeX, git, gh), easy updates
47
+
42
48
  > **📖 [Homebrew Formula](https://github.com/HenriquesLab/homebrew-formulas)** - Includes Python, LaTeX (MacTeX), and all dependencies
43
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44
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  </details>
{rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/src/rxiv_maker/__version__.py RENAMED
@@ -1,3 +1,3 @@
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  """Version information."""
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- __version__ = "1.18.3"
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+ __version__ = "1.18.4"
{rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/.gitignore RENAMED
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{rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/LICENSE RENAMED
File without changes
{rxiv_maker-1.18.3 → rxiv_maker-1.18.4}/pyproject.toml RENAMED
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