rustedscithe 0.1.3__tar.gz → 0.1.4__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (1191) hide show
  1. rustedscithe-0.1.4/PKG-INFO +231 -0
  2. rustedscithe-0.1.4/README.md +208 -0
  3. rustedscithe-0.1.4/bindings/python/Cargo.lock +9671 -0
  4. rustedscithe-0.1.4/bindings/python/Cargo.toml +28 -0
  5. rustedscithe-0.1.4/bindings/python/PUBLICATION_GUIDE.md +647 -0
  6. rustedscithe-0.1.4/bindings/python/PYTHON_ARCHITECTURAL_GUIDELINE.md +191 -0
  7. rustedscithe-0.1.4/bindings/python/PYTHON_BOUNDARY_STORY_TESTS.md +190 -0
  8. rustedscithe-0.1.4/bindings/python/README.md +208 -0
  9. rustedscithe-0.1.4/bindings/python/TODO.md +2299 -0
  10. rustedscithe-0.1.4/bindings/python/benchmarks/README.md +193 -0
  11. rustedscithe-0.1.4/bindings/python/benchmarks/_support.py +52 -0
  12. rustedscithe-0.1.4/bindings/python/benchmarks/python_boundary_ivp.py +358 -0
  13. rustedscithe-0.1.4/bindings/python/benchmarks/python_boundary_ivp_scale.py +221 -0
  14. rustedscithe-0.1.4/bindings/python/benchmarks/python_boundary_lsode2.py +231 -0
  15. rustedscithe-0.1.4/bindings/python/benchmarks/python_boundary_matrix.py +339 -0
  16. rustedscithe-0.1.4/bindings/python/benchmarks/python_boundary_nonlinear_aot.py +298 -0
  17. rustedscithe-0.1.4/bindings/python/benchmarks/python_boundary_nonlinear_fitting.py +349 -0
  18. rustedscithe-0.1.4/bindings/python/benchmarks/python_boundary_overhead.py +102 -0
  19. rustedscithe-0.1.4/bindings/python/benchmarks/python_boundary_radau.py +235 -0
  20. rustedscithe-0.1.4/bindings/python/examples/README.md +94 -0
  21. rustedscithe-0.1.4/bindings/python/examples/backward_euler_basic.py +43 -0
  22. rustedscithe-0.1.4/bindings/python/examples/backward_euler_routes.py +44 -0
  23. rustedscithe-0.1.4/bindings/python/examples/bdf_aot_build.py +67 -0
  24. rustedscithe-0.1.4/bindings/python/examples/bdf_continuation.py +54 -0
  25. rustedscithe-0.1.4/bindings/python/examples/bdf_robertson.py +57 -0
  26. rustedscithe-0.1.4/bindings/python/examples/bvp_damp_frozen_policy.py +44 -0
  27. rustedscithe-0.1.4/bindings/python/examples/bvp_damp_layout_matrix.py +65 -0
  28. rustedscithe-0.1.4/bindings/python/examples/bvp_damp_naive_continuation.py +42 -0
  29. rustedscithe-0.1.4/bindings/python/examples/bvp_damp_observations.py +50 -0
  30. rustedscithe-0.1.4/bindings/python/examples/bvp_sci_aot.py +84 -0
  31. rustedscithe-0.1.4/bindings/python/examples/bvp_sci_frontend_layouts.py +60 -0
  32. rustedscithe-0.1.4/bindings/python/examples/bvp_sci_numerical_callbacks.py +54 -0
  33. rustedscithe-0.1.4/bindings/python/examples/bvp_sci_sparse.py +53 -0
  34. rustedscithe-0.1.4/bindings/python/examples/callback_ivp.py +58 -0
  35. rustedscithe-0.1.4/bindings/python/examples/data_processing_bspline_interpolator.py +37 -0
  36. rustedscithe-0.1.4/bindings/python/examples/data_processing_lsq_spline.py +71 -0
  37. rustedscithe-0.1.4/bindings/python/examples/data_processing_signal.py +80 -0
  38. rustedscithe-0.1.4/bindings/python/examples/gavin_exponential_fit.py +51 -0
  39. rustedscithe-0.1.4/bindings/python/examples/lm_observation_fit.py +57 -0
  40. rustedscithe-0.1.4/bindings/python/examples/lsode2_aot_continuation.py +77 -0
  41. rustedscithe-0.1.4/bindings/python/examples/lsode2_controller_matrix.py +63 -0
  42. rustedscithe-0.1.4/bindings/python/examples/lsode2_lorenz.py +41 -0
  43. rustedscithe-0.1.4/bindings/python/examples/lsode2_lorenz_animation.py +81 -0
  44. rustedscithe-0.1.4/bindings/python/examples/lsode2_three_body.py +70 -0
  45. rustedscithe-0.1.4/bindings/python/examples/lsode2_three_body_animation.py +99 -0
  46. rustedscithe-0.1.4/bindings/python/examples/nonlinear_and_fitting.py +31 -0
  47. rustedscithe-0.1.4/bindings/python/examples/nonlinear_aot.py +63 -0
  48. rustedscithe-0.1.4/bindings/python/examples/nonlinear_parameter_sweep.py +42 -0
  49. rustedscithe-0.1.4/bindings/python/examples/ode_api2_nonstiff.py +51 -0
  50. rustedscithe-0.1.4/bindings/python/examples/radau_basic.py +52 -0
  51. rustedscithe-0.1.4/bindings/python/examples/radau_robertson_aot.py +76 -0
  52. rustedscithe-0.1.4/bindings/python/examples/radau_robertson_routes.py +88 -0
  53. rustedscithe-0.1.4/bindings/python/examples/shooting_bvp_harmonic.py +76 -0
  54. rustedscithe-0.1.4/bindings/python/examples/symbolic_arrays.py +59 -0
  55. rustedscithe-0.1.4/bindings/python/examples/symbolic_calculus.py +74 -0
  56. rustedscithe-0.1.4/bindings/python/examples/task_batch.py +36 -0
  57. rustedscithe-0.1.4/bindings/python/examples/universal_fitting_routes.py +62 -0
  58. rustedscithe-0.1.4/bindings/python/examples/varpro_exponential_fit.py +51 -0
  59. rustedscithe-0.1.4/bindings/python/guides/BACKWARD_EULER_GUIDE_EN.md +61 -0
  60. rustedscithe-0.1.4/bindings/python/guides/BACKWARD_EULER_GUIDE_RU.md +59 -0
  61. rustedscithe-0.1.4/bindings/python/guides/BVP_DAMP_GUIDE_EN.md +165 -0
  62. rustedscithe-0.1.4/bindings/python/guides/BVP_DAMP_GUIDE_RU.md +156 -0
  63. rustedscithe-0.1.4/bindings/python/guides/LSODE2_GUIDE_EN.md +96 -0
  64. rustedscithe-0.1.4/bindings/python/guides/LSODE2_GUIDE_RU.md +95 -0
  65. rustedscithe-0.1.4/bindings/python/guides/PYTHON_SOLVERS_GUIDE_EN.md +212 -0
  66. rustedscithe-0.1.4/bindings/python/guides/PYTHON_SOLVERS_GUIDE_RU.md +175 -0
  67. rustedscithe-0.1.4/bindings/python/guides/SHOOTING_BVP_GUIDE_EN.md +86 -0
  68. rustedscithe-0.1.4/bindings/python/guides/SHOOTING_BVP_GUIDE_RU.md +86 -0
  69. rustedscithe-0.1.4/bindings/python/scripts/test_installed_wheel.ps1 +62 -0
  70. rustedscithe-0.1.4/bindings/python/src/bdf.rs +1254 -0
  71. rustedscithe-0.1.4/bindings/python/src/be.rs +701 -0
  72. rustedscithe-0.1.4/bindings/python/src/bvp.rs +1909 -0
  73. rustedscithe-0.1.4/bindings/python/src/bvp_damp.rs +2129 -0
  74. rustedscithe-0.1.4/bindings/python/src/contract.rs +1040 -0
  75. rustedscithe-0.1.4/bindings/python/src/data_processing.rs +713 -0
  76. rustedscithe-0.1.4/bindings/python/src/gavin.rs +430 -0
  77. rustedscithe-0.1.4/bindings/python/src/lib.rs +322 -0
  78. rustedscithe-0.1.4/bindings/python/src/lsode2.rs +1388 -0
  79. rustedscithe-0.1.4/bindings/python/src/ode_api2.rs +349 -0
  80. rustedscithe-0.1.4/bindings/python/src/parity.rs +395 -0
  81. rustedscithe-0.1.4/bindings/python/src/radau.rs +1333 -0
  82. rustedscithe-0.1.4/bindings/python/test_reports/python_boundary_0.1.4/ivp_scale_release_wheel.md +23 -0
  83. rustedscithe-0.1.4/bindings/python/test_reports/python_boundary_0.1.4/nonlinear_aot_release_wheel.md +30 -0
  84. rustedscithe-0.1.4/bindings/python/test_reports/python_bvp_damp_story/bvp_damp_combustion_20261017T114309Z.md +9 -0
  85. rustedscithe-0.1.4/bindings/python/test_reports/python_bvp_damp_story/bvp_damp_combustion_20261017T114503Z.md +9 -0
  86. rustedscithe-0.1.4/bindings/python/test_reports/python_bvp_damp_story/bvp_damp_combustion_20261017T114808Z.md +9 -0
  87. rustedscithe-0.1.4/bindings/python/test_reports/python_bvp_damp_story/bvp_damp_combustion_20261017T115216Z.md +9 -0
  88. rustedscithe-0.1.4/bindings/python/test_reports/python_bvp_damp_story/bvp_damp_combustion_20261017T115250Z.md +9 -0
  89. rustedscithe-0.1.4/bindings/python/test_reports/python_bvp_damp_story/bvp_damp_combustion_20261017T115616Z.md +9 -0
  90. rustedscithe-0.1.4/bindings/python/test_reports/python_bvp_damp_story/bvp_damp_combustion_20261017T120632Z.md +9 -0
  91. rustedscithe-0.1.4/bindings/python/test_reports/python_bvp_damp_story/bvp_damp_combustion_20261017T121022Z.md +9 -0
  92. rustedscithe-0.1.4/bindings/python/test_reports/python_bvp_damp_story/bvp_damp_combustion_20261017T121101Z.md +9 -0
  93. rustedscithe-0.1.4/bindings/python/test_reports/python_bvp_damp_story/bvp_damp_combustion_20261017T121424Z.md +9 -0
  94. rustedscithe-0.1.4/bindings/python/test_reports/python_bvp_damp_story/bvp_damp_combustion_20261017T121555Z.md +9 -0
  95. rustedscithe-0.1.4/bindings/python/test_reports/python_bvp_damp_story/bvp_damp_combustion_20261017T122101Z.md +9 -0
  96. rustedscithe-0.1.4/bindings/python/test_reports/python_bvp_damp_story/bvp_damp_combustion_20261017T122234Z.md +9 -0
  97. rustedscithe-0.1.4/bindings/python/test_reports/python_bvp_damp_story/bvp_damp_combustion_20261017T122512Z.md +9 -0
  98. rustedscithe-0.1.4/bindings/python/test_reports/python_bvp_damp_story/bvp_damp_combustion_20261017T165727Z.md +9 -0
  99. rustedscithe-0.1.4/bindings/python/tests/test_contract.py +5192 -0
  100. rustedscithe-0.1.4/bindings/python/tests/test_facade.py +305 -0
  101. rustedscithe-0.1.4/bindings/python/tests/typing_consumer.py +99 -0
  102. rustedscithe-0.1.4/pyproject.toml +48 -0
  103. rustedscithe-0.1.4/python/rustedscithe/_native.pyi +888 -0
  104. rustedscithe-0.1.4/python/rustedscithe/facade.py +876 -0
  105. rustedscithe-0.1.4/python/rustedscithe/facade.pyi +94 -0
  106. rustedscithe-0.1.4/src/Utils/postprocessing.rs +454 -0
  107. rustedscithe-0.1.4/src/Utils.rs +19 -0
  108. rustedscithe-0.1.4/src/command_interpreter/bvp_dialogue.rs +789 -0
  109. rustedscithe-0.1.4/src/command_interpreter/ivp_dialogue.rs +940 -0
  110. rustedscithe-0.1.4/src/command_interpreter/task_wizard.rs +298 -0
  111. rustedscithe-0.1.4/src/numerical/BDF/tests/scipy_parity.rs +1253 -0
  112. rustedscithe-0.1.4/src/numerical/BE/NR_for_Euler.rs +1659 -0
  113. rustedscithe-0.1.4/src/numerical/BE/mod.rs +1767 -0
  114. rustedscithe-0.1.4/src/numerical/BE/tests/be_tests.rs +1814 -0
  115. rustedscithe-0.1.4/src/numerical/BE/tests/performance_story_tests.rs +727 -0
  116. rustedscithe-0.1.4/src/numerical/BVP_Damp/BVP_utils_damped.rs +316 -0
  117. rustedscithe-0.1.4/src/numerical/BVP_Damp/NR_Damp_solver_damped.rs +118 -0
  118. rustedscithe-0.1.4/src/numerical/BVP_Damp/NR_Damp_solver_frozen.rs +61 -0
  119. rustedscithe-0.1.4/src/numerical/BVP_Damp/generated_solver_handoff.rs +66 -0
  120. rustedscithe-0.1.4/src/numerical/BVP_Damp/tests/factorization_cache.rs +250 -0
  121. rustedscithe-0.1.4/src/numerical/BVP_api.rs +995 -0
  122. rustedscithe-0.1.4/src/numerical/BVP_sci/BVP_sci_faer.rs +3094 -0
  123. rustedscithe-0.1.4/src/numerical/BVP_sci/BVP_sci_symb.rs +2482 -0
  124. rustedscithe-0.1.4/src/numerical/BVP_sci/BVP_sci_symb_tests2.rs +842 -0
  125. rustedscithe-0.1.4/src/numerical/BVP_sci/BVP_sci_symbolic_functions.rs +1251 -0
  126. rustedscithe-0.1.4/src/numerical/BVP_sci/BVP_sci_utils.rs +75 -0
  127. rustedscithe-0.1.4/src/numerical/BVP_sci/legacy.rs +54 -0
  128. rustedscithe-0.1.4/src/numerical/BVP_sci/new/mod.rs +70 -0
  129. rustedscithe-0.1.4/src/numerical/BVP_sci/new/telemetry.rs +3206 -0
  130. rustedscithe-0.1.4/src/numerical/BVP_sci.rs +76 -0
  131. rustedscithe-0.1.4/src/numerical/LSODE2/config.rs +1696 -0
  132. rustedscithe-0.1.4/src/numerical/LSODE2/native_step_engine.rs +2419 -0
  133. rustedscithe-0.1.4/src/numerical/LSODE2/tests.rs +4231 -0
  134. rustedscithe-0.1.4/src/numerical/NR_for_ODE.rs +190 -0
  135. rustedscithe-0.1.4/src/numerical/Nonlinear_systems/least_squares/lm.rs +1059 -0
  136. rustedscithe-0.1.4/src/numerical/Nonlinear_systems/least_squares/symbolic_solver.rs +1472 -0
  137. rustedscithe-0.1.4/src/numerical/Nonlinear_systems/nonlinear_aot_ffi_transpose_story_tests.rs +347 -0
  138. rustedscithe-0.1.4/src/numerical/Nonlinear_systems/nonlinear_aot_large_story_tests.rs +343 -0
  139. rustedscithe-0.1.4/src/numerical/Nonlinear_systems/nonlinear_atom_native_story_tests.rs +348 -0
  140. rustedscithe-0.1.4/src/numerical/Nonlinear_systems/nonlinear_external_aot_story_tests.rs +276 -0
  141. rustedscithe-0.1.4/src/numerical/Nonlinear_systems/nonlinear_parameter_story_tests.rs +453 -0
  142. rustedscithe-0.1.4/src/numerical/Nonlinear_systems/nonlinear_preparation_telemetry_tests.rs +227 -0
  143. rustedscithe-0.1.4/src/numerical/Nonlinear_systems/nonlinear_solver_tests.rs +212 -0
  144. rustedscithe-0.1.4/src/numerical/Nonlinear_systems/nonlinear_stress_tests.rs +470 -0
  145. rustedscithe-0.1.4/src/numerical/Nonlinear_systems/problem.rs +212 -0
  146. rustedscithe-0.1.4/src/numerical/Nonlinear_systems/symbolic.rs +4129 -0
  147. rustedscithe-0.1.4/src/numerical/Nonlinear_systems/symbolic_aot.rs +232 -0
  148. rustedscithe-0.1.4/src/numerical/Nonlinear_systems/symbolic_aot_lifecycle_tests.rs +539 -0
  149. rustedscithe-0.1.4/src/numerical/Nonlinear_systems/symbolic_aot_solver_tests.rs +352 -0
  150. rustedscithe-0.1.4/src/numerical/Nonlinear_systems/symbolic_aot_test_support.rs +110 -0
  151. rustedscithe-0.1.4/src/numerical/Nonlinear_systems/symbolic_atom.rs +485 -0
  152. rustedscithe-0.1.4/src/numerical/Nonlinear_systems/symbolic_atom_aot.rs +306 -0
  153. rustedscithe-0.1.4/src/numerical/Nonlinear_systems/symbolic_generated.rs +1852 -0
  154. rustedscithe-0.1.4/src/numerical/Nonlinear_systems/tp1907_chon_graphite_tests.rs +1982 -0
  155. rustedscithe-0.1.4/src/numerical/Radau/Radau_newton_old.rs +1357 -0
  156. rustedscithe-0.1.4/src/numerical/Radau/Radau_newton_par_old.rs +488 -0
  157. rustedscithe-0.1.4/src/numerical/Radau/Radau_test_old.rs +2395 -0
  158. rustedscithe-0.1.4/src/numerical/Radau/new/callbacks.rs +678 -0
  159. rustedscithe-0.1.4/src/numerical/Radau/new/solver.rs +834 -0
  160. rustedscithe-0.1.4/src/numerical/ShootingBVP/Shooting_sym_test.rs +450 -0
  161. rustedscithe-0.1.4/src/somelinalg/RustedLINPACK/lu_band_nalg.rs +610 -0
  162. rustedscithe-0.1.4/src/somelinalg/banded/block_tridiag_bench_helpers.rs +263 -0
  163. rustedscithe-0.1.4/src/somelinalg/banded/block_tridiagonal_lu.rs +392 -0
  164. rustedscithe-0.1.4/src/somelinalg/banded/general_lu_partial_pivot.rs +433 -0
  165. rustedscithe-0.1.4/src/somelinalg/banded/lapack_backend.rs +357 -0
  166. rustedscithe-0.1.4/src/somelinalg/banded/lapack_style_banded.rs +2541 -0
  167. rustedscithe-0.1.4/src/somelinalg/banded/lu_storage.rs +465 -0
  168. rustedscithe-0.1.4/src/somelinalg/banded/ops.rs +303 -0
  169. rustedscithe-0.1.4/src/somelinalg/banded/solver_factory.rs +326 -0
  170. rustedscithe-0.1.4/src/somelinalg/banded/tests.rs +555 -0
  171. rustedscithe-0.1.4/src/somelinalg/banded.rs +53 -0
  172. rustedscithe-0.1.4/src/somelinalg/iterative_solvers_cpu/GMRES_mult_api.rs +173 -0
  173. rustedscithe-0.1.4/src/somelinalg/iterative_solvers_cpu/Lx_eq_b.rs +84 -0
  174. rustedscithe-0.1.4/src/somelinalg/iterative_solvers_cpu/some_matrix_inv.rs +248 -0
  175. rustedscithe-0.1.4/src/somelinalg/iterative_solvers_gpu/bicgstab/bicgstab_matrix_api.rs +611 -0
  176. rustedscithe-0.1.4/src/somelinalg/iterative_solvers_gpu/bicgstab/bicgstab_with_preconditioneer.rs +1211 -0
  177. rustedscithe-0.1.4/src/somelinalg/iterative_solvers_gpu/bicgstab/cuda_lib_ffi.rs +532 -0
  178. rustedscithe-0.1.4/src/somelinalg/iterative_solvers_gpu/bicgstab/nalgebra_gs.rs +513 -0
  179. rustedscithe-0.1.4/src/somelinalg/linear_sys_diagnostics.rs +377 -0
  180. rustedscithe-0.1.4/src/somelinalg/sparse_lu_superlu_experimental.rs +427 -0
  181. rustedscithe-0.1.4/src/somelinalg.rs +29 -0
  182. rustedscithe-0.1.4/src/symbolic/View/CodegenIR_atom.rs +923 -0
  183. rustedscithe-0.1.4/src/symbolic/View/bvp.rs +1422 -0
  184. rustedscithe-0.1.4/src/symbolic/View/evaluate.rs +1902 -0
  185. rustedscithe-0.1.4/src/symbolic/bvp/aot_adapters.rs +80 -0
  186. rustedscithe-0.1.4/src/symbolic/bvp/atom_lambdify.rs +902 -0
  187. rustedscithe-0.1.4/src/symbolic/bvp/legacy.rs +8356 -0
  188. rustedscithe-0.1.4/src/symbolic/bvp/legacy_lambdify.rs +513 -0
  189. rustedscithe-0.1.4/src/symbolic/codegen/CodegenIR.rs +3156 -0
  190. rustedscithe-0.1.4/src/symbolic/codegen/codegen_aot_runtime_link.rs +2118 -0
  191. rustedscithe-0.1.4/src/symbolic/codegen/testing_fixtures/test_codegen_generated_bvp_fixtures.rs +330 -0
  192. rustedscithe-0.1.4/src/symbolic/codegen/testing_fixtures/test_codegen_generated_bvp_huge_fixtures.rs +2785 -0
  193. rustedscithe-0.1.4/src/symbolic/codegen/testing_fixtures/test_codegen_generated_bvp_large_chunk_variants.rs +2636 -0
  194. rustedscithe-0.1.4/src/symbolic/codegen/testing_fixtures/test_codegen_generated_bvp_large_fixtures.rs +1407 -0
  195. rustedscithe-0.1.4/src/symbolic/codegen/testing_fixtures/test_codegen_generated_bvp_large_superblock_variants.rs +726 -0
  196. rustedscithe-0.1.3/PKG-INFO +0 -215
  197. rustedscithe-0.1.3/README.md +0 -192
  198. rustedscithe-0.1.3/bindings/python/Cargo.lock +0 -9671
  199. rustedscithe-0.1.3/bindings/python/Cargo.toml +0 -28
  200. rustedscithe-0.1.3/bindings/python/PUBLICATION_GUIDE.md +0 -291
  201. rustedscithe-0.1.3/bindings/python/README.md +0 -192
  202. rustedscithe-0.1.3/bindings/python/TODO.md +0 -1606
  203. rustedscithe-0.1.3/bindings/python/examples/README.md +0 -69
  204. rustedscithe-0.1.3/bindings/python/examples/backward_euler_basic.py +0 -28
  205. rustedscithe-0.1.3/bindings/python/examples/backward_euler_routes.py +0 -28
  206. rustedscithe-0.1.3/bindings/python/examples/bdf_aot_build.py +0 -53
  207. rustedscithe-0.1.3/bindings/python/examples/bdf_continuation.py +0 -38
  208. rustedscithe-0.1.3/bindings/python/examples/bdf_robertson.py +0 -46
  209. rustedscithe-0.1.3/bindings/python/examples/bvp_damp_frozen_policy.py +0 -37
  210. rustedscithe-0.1.3/bindings/python/examples/bvp_damp_layout_matrix.py +0 -45
  211. rustedscithe-0.1.3/bindings/python/examples/bvp_damp_naive_continuation.py +0 -34
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  310. rustedscithe-0.1.3/src/numerical/Nonlinear_systems/symbolic_aot.rs +0 -226
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  319. rustedscithe-0.1.3/src/numerical/Radau/Radau_newton_par_old.rs +0 -488
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  321. rustedscithe-0.1.3/src/numerical/Radau/new/callbacks.rs +0 -675
  322. rustedscithe-0.1.3/src/numerical/Radau/new/solver.rs +0 -834
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  325. rustedscithe-0.1.3/src/somelinalg/banded/block_tridiag_bench_helpers.rs +0 -263
  326. rustedscithe-0.1.3/src/somelinalg/banded/block_tridiagonal_lu.rs +0 -393
  327. rustedscithe-0.1.3/src/somelinalg/banded/general_lu_partial_pivot.rs +0 -433
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  329. rustedscithe-0.1.3/src/somelinalg/banded/lapack_style_banded.rs +0 -2541
  330. rustedscithe-0.1.3/src/somelinalg/banded/lu_storage.rs +0 -465
  331. rustedscithe-0.1.3/src/somelinalg/banded/ops.rs +0 -303
  332. rustedscithe-0.1.3/src/somelinalg/banded/solver_factory.rs +0 -328
  333. rustedscithe-0.1.3/src/somelinalg/banded/tests.rs +0 -555
  334. rustedscithe-0.1.3/src/somelinalg/banded.rs +0 -53
  335. rustedscithe-0.1.3/src/somelinalg/iterative_solvers_cpu/GMRES_mult_api.rs +0 -173
  336. rustedscithe-0.1.3/src/somelinalg/iterative_solvers_cpu/Lx_eq_b.rs +0 -84
  337. rustedscithe-0.1.3/src/somelinalg/iterative_solvers_cpu/some_matrix_inv.rs +0 -248
  338. rustedscithe-0.1.3/src/somelinalg/iterative_solvers_gpu/bicgstab/bicgstab_matrix_api.rs +0 -611
  339. rustedscithe-0.1.3/src/somelinalg/iterative_solvers_gpu/bicgstab/bicgstab_with_preconditioneer.rs +0 -1211
  340. rustedscithe-0.1.3/src/somelinalg/iterative_solvers_gpu/bicgstab/cuda_lib_ffi.rs +0 -536
  341. rustedscithe-0.1.3/src/somelinalg/iterative_solvers_gpu/bicgstab/nalgebra_gs.rs +0 -517
  342. rustedscithe-0.1.3/src/somelinalg/linear_sys_diagnostics.rs +0 -377
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  344. rustedscithe-0.1.3/src/somelinalg.rs +0 -29
  345. rustedscithe-0.1.3/src/symbolic/View/CodegenIR_atom.rs +0 -923
  346. rustedscithe-0.1.3/src/symbolic/View/bvp.rs +0 -1419
  347. rustedscithe-0.1.3/src/symbolic/View/evaluate.rs +0 -1902
  348. rustedscithe-0.1.3/src/symbolic/bvp/aot_adapters.rs +0 -80
  349. rustedscithe-0.1.3/src/symbolic/bvp/atom_lambdify.rs +0 -902
  350. rustedscithe-0.1.3/src/symbolic/bvp/legacy.rs +0 -8355
  351. rustedscithe-0.1.3/src/symbolic/bvp/legacy_lambdify.rs +0 -513
  352. rustedscithe-0.1.3/src/symbolic/codegen/CodegenIR.rs +0 -3154
  353. rustedscithe-0.1.3/src/symbolic/codegen/codegen_aot_runtime_link.rs +0 -2114
  354. rustedscithe-0.1.3/src/symbolic/codegen/testing_fixtures/test_codegen_generated_bvp_fixtures.rs +0 -331
  355. rustedscithe-0.1.3/src/symbolic/codegen/testing_fixtures/test_codegen_generated_bvp_huge_fixtures.rs +0 -2787
  356. rustedscithe-0.1.3/src/symbolic/codegen/testing_fixtures/test_codegen_generated_bvp_large_chunk_variants.rs +0 -2638
  357. rustedscithe-0.1.3/src/symbolic/codegen/testing_fixtures/test_codegen_generated_bvp_large_fixtures.rs +0 -1409
  358. rustedscithe-0.1.3/src/symbolic/codegen/testing_fixtures/test_codegen_generated_bvp_large_superblock_variants.rs +0 -728
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  427. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/bindings/python/src/nonlinear.rs +0 -0
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  430. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/bindings/python/src/symbolic_arrays.rs +0 -0
  431. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/bindings/python/src/system.rs +0 -0
  432. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/bindings/python/src/task.rs +0 -0
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  435. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/bindings/python/src/varpro.rs +0 -0
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  476. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/bindings/python/tests/test_dependencies.py +0 -0
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  478. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/8_ode_example_11_lsode2_lorenz_3d_animation.rs +0 -0
  479. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/8_ode_example_12_lsode2_three_body_problem.rs +0 -0
  480. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/8_ode_example_13_lsode2_task_shell_guide.rs +0 -0
  481. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/8_ode_example_14_universal_ode_example.rs +0 -0
  482. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/8_ode_example_15_ivp_task_shell_guide.rs +0 -0
  483. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/8_ode_example_17_bvp_backends_guide.rs +0 -0
  484. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/8_ode_example_18_bvp_damped_numerical_guide.rs +0 -0
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  489. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/8_ode_example_23_bvp_sci_numerical_parameters_guide.rs +0 -0
  490. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/8_ode_example_24_bvp_sci_lambdify_guide.rs +0 -0
  491. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/8_ode_example_25_bvp_sci_aot_guide.rs +0 -0
  492. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/8_ode_example_26_bvp_sci_backends_guide.rs +0 -0
  493. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/8_ode_example_5_lsode2_numerical_guide.rs +0 -0
  494. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/8_ode_example_6_lsode2_lambdify_guide.rs +0 -0
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  497. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/8_ode_example_9_lsode2_manual_adams_guide.rs +0 -0
  498. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/atombasic.rs +0 -0
  499. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/banded_solvers_guide.rs +0 -0
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  502. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/bdf_solver_examples.rs +0 -0
  503. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/bdf_symbolic_continuation_guide.rs +0 -0
  504. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/be_aot_guide.rs +0 -0
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  506. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/be_symbolic_continuation_guide.rs +0 -0
  507. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/bvp_backends_guide.rs +0 -0
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  509. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/bvp_damped_lambdify_guide.rs +0 -0
  510. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/bvp_damped_numerical_guide.rs +0 -0
  511. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/bvp_frozen_aot_guide.rs +0 -0
  512. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/bvp_frozen_lambdify_guide.rs +0 -0
  513. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/bvp_frozen_numerical_route_guide.rs +0 -0
  514. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/bvp_sci_aot_guide.rs +0 -0
  515. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/bvp_sci_backends_guide.rs +0 -0
  516. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/bvp_sci_lambdify_guide.rs +0 -0
  517. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/bvp_sci_numerical_guide.rs +0 -0
  518. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/bvp_sci_numerical_parameters_guide.rs +0 -0
  519. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/bvp_task_shell_guide.rs +0 -0
  520. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/curve_fitting_guide.rs +0 -0
  521. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/ivp_backends_guide.rs +0 -0
  522. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/ivp_kinetics_symbolic_preflight_guide.rs +0 -0
  523. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/ivp_task_shell_backward_euler_guide.rs +0 -0
  524. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/ivp_task_shell_bdf_guide.rs +0 -0
  525. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/ivp_task_shell_guide.rs +0 -0
  526. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/legacy_main_compat.rs +0 -0
  527. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/lm_fitting_guide.rs +0 -0
  528. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/lsode2_aot_guide.rs +0 -0
  529. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/lsode2_lambdify_guide.rs +0 -0
  530. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/lsode2_lorenz_2d_animation.rs +0 -0
  531. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/lsode2_lorenz_3d_animation.rs +0 -0
  532. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/lsode2_manual_adams_guide.rs +0 -0
  533. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/lsode2_manual_bdf_guide.rs +0 -0
  534. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/lsode2_numerical_guide.rs +0 -0
  535. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/lsode2_parameter_continuation_aot.rs +0 -0
  536. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/lsode2_parameter_continuation_lambdify.rs +0 -0
  537. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/lsode2_task_shell_guide.rs +0 -0
  538. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/lsode2_three_body_problem.rs +0 -0
  539. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/misc/cleanup_logs.rs +0 -0
  540. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/misc/test_trig_parsing.rs +0 -0
  541. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/nonlinear_aot_lifecycle_guide.rs +0 -0
  542. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/nonlinear_lambdify_legacy_guide.rs +0 -0
  543. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/nonlinear_lambdify_prepared_guide.rs +0 -0
  544. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/nonlinear_systems_guide.rs +0 -0
  545. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/nonlinear_systems_modern_guide.rs +0 -0
  546. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/plotting/lorenz_2d_animation.rs +0 -0
  547. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/plotting/lorenz_3d_animation.rs +0 -0
  548. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/plotting/plot_mathematical_functions.rs +0 -0
  549. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/plotting/plot_static_functions.rs +0 -0
  550. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/plotting/plot_symbolic_functions.rs +0 -0
  551. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/radau_aot_continuation.rs +0 -0
  552. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/radau_aot_single.rs +0 -0
  553. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/radau_backends_guide.rs +0 -0
  554. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/radau_lambdify_continuation.rs +0 -0
  555. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/radau_lambdify_single.rs +0 -0
  556. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/radau_native_callbacks.rs +0 -0
  557. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/radau_public_api_guide.rs +0 -0
  558. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/rus/bdf_aot_guide.rs +0 -0
  559. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/rus/bdf_native_dense_guide.rs +0 -0
  560. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/rus/bdf_symbolic_continuation_guide.rs +0 -0
  561. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/rus/be_aot_guide.rs +0 -0
  562. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/rus/be_native_callbacks_guide.rs +0 -0
  563. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/rus/be_symbolic_continuation_guide.rs +0 -0
  564. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/rus/bvp_backends_guide.rs +0 -0
  565. {rustedscithe-0.1.3 → rustedscithe-0.1.4}/examples/rus/bvp_damped_aot_guide.rs +0 -0
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@@ -0,0 +1,231 @@
1
+ Metadata-Version: 2.4
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+ Name: rustedscithe
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+ Version: 0.1.4
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+ Classifier: Development Status :: 3 - Alpha
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+ Classifier: Intended Audience :: Science/Research
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+ Classifier: License :: OSI Approved :: MIT License
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+ Classifier: Programming Language :: Python :: 3
8
+ Classifier: Programming Language :: Python :: 3 :: Only
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+ Classifier: Programming Language :: Rust
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+ Classifier: Topic :: Scientific/Engineering :: Mathematics
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+ Requires-Dist: numpy>=2.0
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+ Requires-Dist: mypy==2.4.0 ; extra == 'dev'
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+ Provides-Extra: dev
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+ License-File: LICENSE.txt
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+ Summary: Python bindings for RustedSciThe symbolic and numerical computing
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+ Keywords: numerical,ode,bvp,symbolic,rust
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+ Author: RustedSciThe contributors
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+ Requires-Python: >=3.10
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+ Description-Content-Type: text/markdown; charset=UTF-8; variant=GFM
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+ Project-URL: Homepage, https://github.com/Gleb-Zaslavsky/RustedSciThe
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+ Project-URL: Repository, https://github.com/Gleb-Zaslavsky/RustedSciThe
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+
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+ # RustedSciThe for Python
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+
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+ RustedSciThe brings a symbolic engine and a family of stiff ODE, boundary-value,
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+ nonlinear-system and fitting solvers to Python. The Python package is a thin,
27
+ idiomatic interface over a compiled Rust numerical core: expressions are parsed
28
+ and differentiated in Rust, solver workspaces and algorithms stay in Rust, and
29
+ Python receives ordinary typed objects and detached NumPy results.
30
+
31
+ This project is for problems where a trustworthy derivative, a stiff or
32
+ strongly nonlinear method, and visibility into numerical behavior matter more
33
+ than hiding every solver choice behind one universal interface.
34
+
35
+ ## Why RustedSciThe
36
+
37
+ - **Symbolic derivatives without a Python CAS dependency.** Build expressions,
38
+ simplify and substitute them, and derive exact Jacobians with RustedSciThe's
39
+ own symbolic engine. Prepared residual and Jacobian callbacks are reused
40
+ instead of being rebuilt during every numerical iteration.
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+ - **Native stiff IVP and BVP solvers.** Use Rust implementations inspired by
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+ SciPy's Radau, variable-order BDF and collocation methods, alongside LSODE2,
43
+ Backward Euler and the damped BVP solver. The numerical solve runs in Rust,
44
+ not in a Python loop around a native linear algebra call.
45
+ - **More than ODE integration.** Solve square nonlinear systems, rectangular
46
+ least-squares problems, observation-based fitting and separable models with
47
+ VarPro. These are first-class numerical workflows, not just helper routines
48
+ attached to an IVP API.
49
+ - **Algorithms beyond the SciPy-like IVP/BVP set.** Native nonlinear methods,
50
+ a dedicated rectangular Levenberg-Marquardt solver, Gavin fitting and
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+ variable projection cover workflows that are not merely wrappers around
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+ SciPy's ODE interfaces.
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+ - **Choose the linear algebra layout when the solver supports it.** Dense,
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+ Sparse and Banded routes are available across most solver families. Their
55
+ performance depends on the equation structure and problem size; there is no
56
+ universally fastest layout. BVP_sci additionally offers opt-in SuperLU.
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+ - **Lambdify and AOT execution.** Use prepared in-process callbacks for a fast
58
+ development cycle, or generated compiled callbacks where supported. The
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+ symbolic frontend (`expr_legacy` or `atom_native`) is a separate choice from
60
+ the execution route (`lambdify` or `aot`).
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+ - **Prepared models and parameter series.** Reuse symbolic preparation across
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+ continuation and restart workflows where the solver exposes that lifecycle.
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+ - **Diagnostics designed for numerical work.** Typed exceptions, route
64
+ provenance, optional counters and stage timings help explain what happened
65
+ without parsing console output or error messages.
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+
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+ Performance is workload-dependent. A Rust implementation is not automatically
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+ the fastest choice for every equation, frontend, layout or lifecycle. Compare
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+ the same workload and inspect preparation, callback and full-solve timings
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+ before choosing a route.
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+
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+ ## Architecture
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+
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+ ```text
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+ Python model and NumPy inputs
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+ |
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+ PyO3 boundary
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+ |
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+ Rust symbolic preparation -> exact derivatives -> Lambdify or AOT callbacks
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+ |
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+ Rust solver -> Dense / Sparse / Banded linear algebra where supported
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+ |
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+ typed result, telemetry and owned NumPy arrays
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+ ```
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+
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+ Python is the user-facing layer, not a second implementation of the algorithms.
87
+ NumPy arrays returned by result objects own their data; they do not borrow a
88
+ mutable solver workspace. The package does not require SymPy.
89
+
90
+ ## Quick Start
91
+
92
+ This small stiff IVP uses Radau with its default symbolic and numerical
93
+ configuration:
94
+
95
+ ```python
96
+ from rustedscithe import Expr, RadauSolver
97
+
98
+ y = Expr.variable("y")
99
+ solver = RadauSolver([-y], ["y"], "t", 0.0, 1.0, 0.1)
100
+ solution = solver.solve([1.0])
101
+ print(f"y(1) = {solution.final_state[0]:.8f}")
102
+ ```
103
+
104
+ Install the published package with `python -m pip install rustedscithe`. For a
105
+ checkout-based editable build, install `maturin` and run:
106
+
107
+ ```powershell
108
+ python -m maturin develop --manifest-path bindings/python/Cargo.toml
109
+ ```
110
+
111
+ The extension uses the stable `abi3` Python 3.10+ ABI and NumPy 2.x. Import the
112
+ public API from `rustedscithe`; `_native` is an implementation module.
113
+
114
+ ## Solver Families
115
+
116
+ | Problem | Python entry points | Useful distinction |
117
+ | --- | --- | --- |
118
+ | Initial-value problems | `UniversalNonStiffSolver`, `RadauSolver`, `BdfSolver`, `BackwardEulerSolver`, `Lsode2Solver` | ODE_api2 exposes RK45/DOPRI/AB4 through its narrow native nonstiff route; stiff solvers retain their dedicated APIs. LSODE2 separates family from its Adams/BDF/Auto controller. |
119
+ | Boundary-value problems | `BvpSciSolver`, `BvpDampSolver`, `BvpDampNaiveSolver`, `BvpDampFrozenSolver` | BVP_sci uses symbolic boundary residuals and collocation; BVP_Damp exposes distinct damped, fixed-mesh Naive and Frozen-Jacobian routes. Their boundary contracts intentionally differ. |
120
+ | Nonlinear systems | `NonlinearSolver` | Prepared square systems with Newton, LM and trust-region method families. |
121
+ | Least squares and fitting | `FittingSolver`, `GavinFittingSolver`, `VarProSolver` | Rectangular symbolic least squares, observation-based fitting and separable-model fitting have distinct contracts. |
122
+ | Signal/data utilities | `spline_resample`, `least_squares_bspline`, `savgol_filter`, `lowess_smooth`, `fit_quality` | Native Rust preprocessing helpers with NumPy float64 inputs/outputs; LSQ B-splines expose explicit DenseQR/Banded routes. See `examples/data_processing_signal.py` and `examples/data_processing_lsq_spline.py`. |
123
+ | Text task documents | `TaskDocument`, `task`, `task_dict`, `run_task_batch` | Parse, inspect as a detached dict, and execute reusable IVP/BVP documents through the native task infrastructure. |
124
+
125
+ Use `capabilities("solver_name")` to inspect the Python-supported routes.
126
+ The axis lists describe available values, not every valid Cartesian
127
+ combination. For the method-selecting fitting facade, query
128
+ `universal_fitting_lm`, `universal_fitting_gavin` or
129
+ `universal_fitting_varpro` to see method-specific limits; the aggregate
130
+ `universal_fitting` record is a union. BVP_sci additionally reports selectable
131
+ sparse factorization policies separately from its `Sparse` matrix layout,
132
+ including the explicitly marked experimental reusable-Faer routes. Native
133
+ features that are not exposed by this package are not implied by a shared
134
+ option name; unsupported combinations raise a typed error instead of silently
135
+ selecting a different backend.
136
+
137
+ ## Configuration Choices
138
+
139
+ Several independent axes shape a solve, and a given solver supports only a
140
+ documented subset of their combinations:
141
+
142
+ | Axis | Examples | What it selects |
143
+ | --- | --- | --- |
144
+ | Symbolic frontend | `expr_legacy`, `atom_native` | Representation used for symbolic preparation and differentiation. |
145
+ | Callback execution | `lambdify`, `aot` | In-process prepared closures or generated compiled artifacts. |
146
+ | Matrix layout | `dense`, `sparse`, `banded` | Storage and linear-system route. |
147
+ | Callback policy | `sequential`, `parallel`, `auto` | Scheduling where the native solver supports it. |
148
+ | Telemetry | `off`, `counters`, `timings`, `detailed` | Native collection mode; `ode_api2_nonstiff` supports only `off`. |
149
+ | Lifecycle | fresh solve, `prepare`, continuation, restart | Whether prepared model or previous state is reused. |
150
+
151
+ Check the relevant guide and `capabilities()` before combining options. A
152
+ capability's axis lists show supported values, not every cross-product; the
153
+ shared validator and concrete constructor reject unsupported combinations.
154
+ `supports_logging` reports support for the common `SolverOptions.logging_level`
155
+ mapping; solver-specific logging controls remain separate. Telemetry modes are
156
+ reported per solver family. A structured layout is useful
157
+ only when the problem has exploitable structure;
158
+ parallel callback evaluation and AOT compilation also have workload-dependent
159
+ break-even points. For continuation, distinguish cold preparation from warm
160
+ solve time.
161
+
162
+ ## Guides and Examples
163
+
164
+ The overview guides explain shared Python conventions. Solver-specific guides
165
+ preserve each native solver's option breadth, supported routes, limitations and
166
+ recommended workflows.
167
+
168
+ Binding design and review criteria are defined in the
169
+ [Python architectural guideline](PYTHON_ARCHITECTURAL_GUIDELINE.md).
170
+
171
+ | Family | English | Русский |
172
+ | --- | --- | --- |
173
+ | Python API overview | [Python solvers](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/PYTHON_SOLVERS_GUIDE_EN.md) | [Обзор Python API](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/PYTHON_SOLVERS_GUIDE_RU.md) |
174
+ | Symbolic mathematics | [Guide](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/SYMBOLIC_MATH_GUIDE_EN.md) | [Руководство](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/SYMBOLIC_MATH_GUIDE_RU.md) |
175
+ | Data processing | [Guide](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/DATA_PROCESSING_GUIDE_EN.md) | [Руководство](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/DATA_PROCESSING_GUIDE_RU.md) |
176
+ | Trajectory animation | [Guide](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/TRAJECTORY_ANIMATION_GUIDE_EN.md) | [Руководство](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/TRAJECTORY_ANIMATION_GUIDE_RU.md) |
177
+ | Radau | [Guide](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/RADAU_GUIDE_EN.md) | [Руководство](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/RADAU_GUIDE_RU.md) |
178
+ | BDF | [Guide](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/BDF_GUIDE_EN.md) | [Руководство](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/BDF_GUIDE_RU.md) |
179
+ | Backward Euler | [Guide](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/BACKWARD_EULER_GUIDE_EN.md) | [Руководство](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/BACKWARD_EULER_GUIDE_RU.md) |
180
+ | LSODE2 | [Guide](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/LSODE2_GUIDE_EN.md) | [Руководство](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/LSODE2_GUIDE_RU.md) |
181
+ | BVP_sci | [Guide](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/BVP_SCI_GUIDE_EN.md) | [Руководство](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/BVP_SCI_GUIDE_RU.md) |
182
+ | BVP_Damp | [Guide](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/BVP_DAMP_GUIDE_EN.md) | [Руководство](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/BVP_DAMP_GUIDE_RU.md) |
183
+ | ShootingBVP | [Guide](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/SHOOTING_BVP_GUIDE_EN.md) | [Руководство](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/SHOOTING_BVP_GUIDE_RU.md) |
184
+ | Nonlinear systems and fitting | [Guide](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/NONLINEAR_FITTING_GUIDE_EN.md) | [Руководство](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/NONLINEAR_FITTING_GUIDE_RU.md) |
185
+
186
+ Runnable, commented Python examples include native symbolic calculus and
187
+ arrays, Robertson kinetics, Lorenz and three-body systems, frontend/layout
188
+ comparisons, continuation, AOT and task documents. See the [Python example index](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/examples/README.md);
189
+ the repository's Rust examples are collected separately in the root
190
+ [examples directory](https://github.com/Gleb-Zaslavsky/RustedSciThe/tree/master/examples/).
191
+
192
+ ## Text Tasks and Executable
193
+
194
+ Python users can parse and run text task documents with `TaskDocument` or
195
+ `task(...)`, inspect a detached dictionary with `task_dict(...)`, and batch
196
+ independent documents with `run_task_batch(...)`. Parsing, normalization and
197
+ semantic validation are performed by the existing Rust command-interpreter
198
+ parser; Python does not implement a second task DSL. `task_dict(...)` does not
199
+ execute the document. The batch API preserves typed per-task failures and can
200
+ write a compact table. The Windows console executable is part of the main Rust
201
+ project, not this Python package; see the [task parser documentation](https://github.com/Gleb-Zaslavsky/RustedSciThe/tree/master/src/command_interpreter/).
202
+
203
+ Optional external tools can be checked without console output:
204
+
205
+ ```python
206
+ from rustedscithe import check_dependencies
207
+
208
+ report = check_dependencies()
209
+ print(report["tools"]["gcc"]["status"])
210
+ print(report["superlu"]) # build feature and configured shared-library loadability
211
+ ```
212
+
213
+ The PATH checks cover Gnuplot, TCC, GCC, Zig and Pandoc. SuperLU is checked
214
+ separately through `SUPERLU_LIBRARY`; a successful dynamic load does not by
215
+ itself validate the bridge ABI or prove a numerical solve will succeed.
216
+
217
+ ## Diagnostics and Development
218
+
219
+ Native exceptions preserve their Python class and expose machine-readable
220
+ `stage`, `solver` and `route` attributes. Telemetry is opt-in and solutions
221
+ provide detached counters, timings and report writers where supported. Prefer
222
+ these fields over parsing exception text or redirecting build output into a
223
+ performance report.
224
+
225
+ For development and contribution checks, see the [Python contract tests](https://github.com/Gleb-Zaslavsky/RustedSciThe/tree/master/bindings/python/tests/),
226
+ the [strict typing consumer](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/tests/typing_consumer.py),
227
+ and the [Python binding roadmap](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/TODO.md).
228
+ The core crate's broader algorithm documentation and release evidence remain
229
+ in the [main README](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/README.md)
230
+ and solver guides.
231
+
@@ -0,0 +1,208 @@
1
+ # RustedSciThe for Python
2
+
3
+ RustedSciThe brings a symbolic engine and a family of stiff ODE, boundary-value,
4
+ nonlinear-system and fitting solvers to Python. The Python package is a thin,
5
+ idiomatic interface over a compiled Rust numerical core: expressions are parsed
6
+ and differentiated in Rust, solver workspaces and algorithms stay in Rust, and
7
+ Python receives ordinary typed objects and detached NumPy results.
8
+
9
+ This project is for problems where a trustworthy derivative, a stiff or
10
+ strongly nonlinear method, and visibility into numerical behavior matter more
11
+ than hiding every solver choice behind one universal interface.
12
+
13
+ ## Why RustedSciThe
14
+
15
+ - **Symbolic derivatives without a Python CAS dependency.** Build expressions,
16
+ simplify and substitute them, and derive exact Jacobians with RustedSciThe's
17
+ own symbolic engine. Prepared residual and Jacobian callbacks are reused
18
+ instead of being rebuilt during every numerical iteration.
19
+ - **Native stiff IVP and BVP solvers.** Use Rust implementations inspired by
20
+ SciPy's Radau, variable-order BDF and collocation methods, alongside LSODE2,
21
+ Backward Euler and the damped BVP solver. The numerical solve runs in Rust,
22
+ not in a Python loop around a native linear algebra call.
23
+ - **More than ODE integration.** Solve square nonlinear systems, rectangular
24
+ least-squares problems, observation-based fitting and separable models with
25
+ VarPro. These are first-class numerical workflows, not just helper routines
26
+ attached to an IVP API.
27
+ - **Algorithms beyond the SciPy-like IVP/BVP set.** Native nonlinear methods,
28
+ a dedicated rectangular Levenberg-Marquardt solver, Gavin fitting and
29
+ variable projection cover workflows that are not merely wrappers around
30
+ SciPy's ODE interfaces.
31
+ - **Choose the linear algebra layout when the solver supports it.** Dense,
32
+ Sparse and Banded routes are available across most solver families. Their
33
+ performance depends on the equation structure and problem size; there is no
34
+ universally fastest layout. BVP_sci additionally offers opt-in SuperLU.
35
+ - **Lambdify and AOT execution.** Use prepared in-process callbacks for a fast
36
+ development cycle, or generated compiled callbacks where supported. The
37
+ symbolic frontend (`expr_legacy` or `atom_native`) is a separate choice from
38
+ the execution route (`lambdify` or `aot`).
39
+ - **Prepared models and parameter series.** Reuse symbolic preparation across
40
+ continuation and restart workflows where the solver exposes that lifecycle.
41
+ - **Diagnostics designed for numerical work.** Typed exceptions, route
42
+ provenance, optional counters and stage timings help explain what happened
43
+ without parsing console output or error messages.
44
+
45
+ Performance is workload-dependent. A Rust implementation is not automatically
46
+ the fastest choice for every equation, frontend, layout or lifecycle. Compare
47
+ the same workload and inspect preparation, callback and full-solve timings
48
+ before choosing a route.
49
+
50
+ ## Architecture
51
+
52
+ ```text
53
+ Python model and NumPy inputs
54
+ |
55
+ PyO3 boundary
56
+ |
57
+ Rust symbolic preparation -> exact derivatives -> Lambdify or AOT callbacks
58
+ |
59
+ Rust solver -> Dense / Sparse / Banded linear algebra where supported
60
+ |
61
+ typed result, telemetry and owned NumPy arrays
62
+ ```
63
+
64
+ Python is the user-facing layer, not a second implementation of the algorithms.
65
+ NumPy arrays returned by result objects own their data; they do not borrow a
66
+ mutable solver workspace. The package does not require SymPy.
67
+
68
+ ## Quick Start
69
+
70
+ This small stiff IVP uses Radau with its default symbolic and numerical
71
+ configuration:
72
+
73
+ ```python
74
+ from rustedscithe import Expr, RadauSolver
75
+
76
+ y = Expr.variable("y")
77
+ solver = RadauSolver([-y], ["y"], "t", 0.0, 1.0, 0.1)
78
+ solution = solver.solve([1.0])
79
+ print(f"y(1) = {solution.final_state[0]:.8f}")
80
+ ```
81
+
82
+ Install the published package with `python -m pip install rustedscithe`. For a
83
+ checkout-based editable build, install `maturin` and run:
84
+
85
+ ```powershell
86
+ python -m maturin develop --manifest-path bindings/python/Cargo.toml
87
+ ```
88
+
89
+ The extension uses the stable `abi3` Python 3.10+ ABI and NumPy 2.x. Import the
90
+ public API from `rustedscithe`; `_native` is an implementation module.
91
+
92
+ ## Solver Families
93
+
94
+ | Problem | Python entry points | Useful distinction |
95
+ | --- | --- | --- |
96
+ | Initial-value problems | `UniversalNonStiffSolver`, `RadauSolver`, `BdfSolver`, `BackwardEulerSolver`, `Lsode2Solver` | ODE_api2 exposes RK45/DOPRI/AB4 through its narrow native nonstiff route; stiff solvers retain their dedicated APIs. LSODE2 separates family from its Adams/BDF/Auto controller. |
97
+ | Boundary-value problems | `BvpSciSolver`, `BvpDampSolver`, `BvpDampNaiveSolver`, `BvpDampFrozenSolver` | BVP_sci uses symbolic boundary residuals and collocation; BVP_Damp exposes distinct damped, fixed-mesh Naive and Frozen-Jacobian routes. Their boundary contracts intentionally differ. |
98
+ | Nonlinear systems | `NonlinearSolver` | Prepared square systems with Newton, LM and trust-region method families. |
99
+ | Least squares and fitting | `FittingSolver`, `GavinFittingSolver`, `VarProSolver` | Rectangular symbolic least squares, observation-based fitting and separable-model fitting have distinct contracts. |
100
+ | Signal/data utilities | `spline_resample`, `least_squares_bspline`, `savgol_filter`, `lowess_smooth`, `fit_quality` | Native Rust preprocessing helpers with NumPy float64 inputs/outputs; LSQ B-splines expose explicit DenseQR/Banded routes. See `examples/data_processing_signal.py` and `examples/data_processing_lsq_spline.py`. |
101
+ | Text task documents | `TaskDocument`, `task`, `task_dict`, `run_task_batch` | Parse, inspect as a detached dict, and execute reusable IVP/BVP documents through the native task infrastructure. |
102
+
103
+ Use `capabilities("solver_name")` to inspect the Python-supported routes.
104
+ The axis lists describe available values, not every valid Cartesian
105
+ combination. For the method-selecting fitting facade, query
106
+ `universal_fitting_lm`, `universal_fitting_gavin` or
107
+ `universal_fitting_varpro` to see method-specific limits; the aggregate
108
+ `universal_fitting` record is a union. BVP_sci additionally reports selectable
109
+ sparse factorization policies separately from its `Sparse` matrix layout,
110
+ including the explicitly marked experimental reusable-Faer routes. Native
111
+ features that are not exposed by this package are not implied by a shared
112
+ option name; unsupported combinations raise a typed error instead of silently
113
+ selecting a different backend.
114
+
115
+ ## Configuration Choices
116
+
117
+ Several independent axes shape a solve, and a given solver supports only a
118
+ documented subset of their combinations:
119
+
120
+ | Axis | Examples | What it selects |
121
+ | --- | --- | --- |
122
+ | Symbolic frontend | `expr_legacy`, `atom_native` | Representation used for symbolic preparation and differentiation. |
123
+ | Callback execution | `lambdify`, `aot` | In-process prepared closures or generated compiled artifacts. |
124
+ | Matrix layout | `dense`, `sparse`, `banded` | Storage and linear-system route. |
125
+ | Callback policy | `sequential`, `parallel`, `auto` | Scheduling where the native solver supports it. |
126
+ | Telemetry | `off`, `counters`, `timings`, `detailed` | Native collection mode; `ode_api2_nonstiff` supports only `off`. |
127
+ | Lifecycle | fresh solve, `prepare`, continuation, restart | Whether prepared model or previous state is reused. |
128
+
129
+ Check the relevant guide and `capabilities()` before combining options. A
130
+ capability's axis lists show supported values, not every cross-product; the
131
+ shared validator and concrete constructor reject unsupported combinations.
132
+ `supports_logging` reports support for the common `SolverOptions.logging_level`
133
+ mapping; solver-specific logging controls remain separate. Telemetry modes are
134
+ reported per solver family. A structured layout is useful
135
+ only when the problem has exploitable structure;
136
+ parallel callback evaluation and AOT compilation also have workload-dependent
137
+ break-even points. For continuation, distinguish cold preparation from warm
138
+ solve time.
139
+
140
+ ## Guides and Examples
141
+
142
+ The overview guides explain shared Python conventions. Solver-specific guides
143
+ preserve each native solver's option breadth, supported routes, limitations and
144
+ recommended workflows.
145
+
146
+ Binding design and review criteria are defined in the
147
+ [Python architectural guideline](PYTHON_ARCHITECTURAL_GUIDELINE.md).
148
+
149
+ | Family | English | Русский |
150
+ | --- | --- | --- |
151
+ | Python API overview | [Python solvers](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/PYTHON_SOLVERS_GUIDE_EN.md) | [Обзор Python API](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/PYTHON_SOLVERS_GUIDE_RU.md) |
152
+ | Symbolic mathematics | [Guide](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/SYMBOLIC_MATH_GUIDE_EN.md) | [Руководство](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/SYMBOLIC_MATH_GUIDE_RU.md) |
153
+ | Data processing | [Guide](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/DATA_PROCESSING_GUIDE_EN.md) | [Руководство](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/DATA_PROCESSING_GUIDE_RU.md) |
154
+ | Trajectory animation | [Guide](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/TRAJECTORY_ANIMATION_GUIDE_EN.md) | [Руководство](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/TRAJECTORY_ANIMATION_GUIDE_RU.md) |
155
+ | Radau | [Guide](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/RADAU_GUIDE_EN.md) | [Руководство](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/RADAU_GUIDE_RU.md) |
156
+ | BDF | [Guide](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/BDF_GUIDE_EN.md) | [Руководство](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/BDF_GUIDE_RU.md) |
157
+ | Backward Euler | [Guide](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/BACKWARD_EULER_GUIDE_EN.md) | [Руководство](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/BACKWARD_EULER_GUIDE_RU.md) |
158
+ | LSODE2 | [Guide](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/LSODE2_GUIDE_EN.md) | [Руководство](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/LSODE2_GUIDE_RU.md) |
159
+ | BVP_sci | [Guide](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/BVP_SCI_GUIDE_EN.md) | [Руководство](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/BVP_SCI_GUIDE_RU.md) |
160
+ | BVP_Damp | [Guide](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/BVP_DAMP_GUIDE_EN.md) | [Руководство](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/BVP_DAMP_GUIDE_RU.md) |
161
+ | ShootingBVP | [Guide](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/SHOOTING_BVP_GUIDE_EN.md) | [Руководство](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/SHOOTING_BVP_GUIDE_RU.md) |
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+ | Nonlinear systems and fitting | [Guide](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/NONLINEAR_FITTING_GUIDE_EN.md) | [Руководство](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/guides/NONLINEAR_FITTING_GUIDE_RU.md) |
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+
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+ Runnable, commented Python examples include native symbolic calculus and
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+ arrays, Robertson kinetics, Lorenz and three-body systems, frontend/layout
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+ comparisons, continuation, AOT and task documents. See the [Python example index](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/examples/README.md);
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+ the repository's Rust examples are collected separately in the root
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+ [examples directory](https://github.com/Gleb-Zaslavsky/RustedSciThe/tree/master/examples/).
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+
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+ ## Text Tasks and Executable
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+
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+ Python users can parse and run text task documents with `TaskDocument` or
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+ `task(...)`, inspect a detached dictionary with `task_dict(...)`, and batch
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+ independent documents with `run_task_batch(...)`. Parsing, normalization and
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+ semantic validation are performed by the existing Rust command-interpreter
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+ parser; Python does not implement a second task DSL. `task_dict(...)` does not
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+ execute the document. The batch API preserves typed per-task failures and can
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+ write a compact table. The Windows console executable is part of the main Rust
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+ project, not this Python package; see the [task parser documentation](https://github.com/Gleb-Zaslavsky/RustedSciThe/tree/master/src/command_interpreter/).
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+
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+ Optional external tools can be checked without console output:
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+
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+ ```python
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+ from rustedscithe import check_dependencies
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+
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+ report = check_dependencies()
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+ print(report["tools"]["gcc"]["status"])
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+ print(report["superlu"]) # build feature and configured shared-library loadability
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+ ```
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+
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+ The PATH checks cover Gnuplot, TCC, GCC, Zig and Pandoc. SuperLU is checked
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+ separately through `SUPERLU_LIBRARY`; a successful dynamic load does not by
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+ itself validate the bridge ABI or prove a numerical solve will succeed.
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+
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+ ## Diagnostics and Development
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+
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+ Native exceptions preserve their Python class and expose machine-readable
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+ `stage`, `solver` and `route` attributes. Telemetry is opt-in and solutions
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+ provide detached counters, timings and report writers where supported. Prefer
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+ these fields over parsing exception text or redirecting build output into a
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+ performance report.
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+
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+ For development and contribution checks, see the [Python contract tests](https://github.com/Gleb-Zaslavsky/RustedSciThe/tree/master/bindings/python/tests/),
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+ the [strict typing consumer](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/tests/typing_consumer.py),
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+ and the [Python binding roadmap](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/bindings/python/TODO.md).
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+ The core crate's broader algorithm documentation and release evidence remain
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+ in the [main README](https://github.com/Gleb-Zaslavsky/RustedSciThe/blob/master/README.md)
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+ and solver guides.