rowan-python 2.1.4__tar.gz → 2.1.6__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (53) hide show
  1. {rowan_python-2.1.4 → rowan_python-2.1.6}/PKG-INFO +2 -2
  2. rowan_python-2.1.6/examples/ion_mobility.py +17 -0
  3. rowan_python-2.1.6/examples/nmr.py +17 -0
  4. {rowan_python-2.1.4 → rowan_python-2.1.6}/examples/protein_cofolding.py +2 -0
  5. rowan_python-2.1.6/examples/strain.py +16 -0
  6. {rowan_python-2.1.4 → rowan_python-2.1.6}/pixi.lock +156 -235
  7. {rowan_python-2.1.4 → rowan_python-2.1.6}/pyproject.toml +2 -2
  8. rowan_python-2.1.6/rowan/constants.py +3 -0
  9. {rowan_python-2.1.4 → rowan_python-2.1.6}/rowan/utils.py +1 -0
  10. {rowan_python-2.1.4 → rowan_python-2.1.6}/rowan/workflow.py +156 -3
  11. rowan_python-2.1.4/rowan/constants.py +0 -1
  12. {rowan_python-2.1.4 → rowan_python-2.1.6}/.envrc +0 -0
  13. {rowan_python-2.1.4 → rowan_python-2.1.6}/.github/workflows/python-publish.yml +0 -0
  14. {rowan_python-2.1.4 → rowan_python-2.1.6}/.github/workflows/test.yml +0 -0
  15. {rowan_python-2.1.4 → rowan_python-2.1.6}/.gitignore +0 -0
  16. {rowan_python-2.1.4 → rowan_python-2.1.6}/.pre-commit-config.yaml +0 -0
  17. {rowan_python-2.1.4 → rowan_python-2.1.6}/LICENSE +0 -0
  18. {rowan_python-2.1.4 → rowan_python-2.1.6}/README.md +0 -0
  19. {rowan_python-2.1.4 → rowan_python-2.1.6}/docs/images/deciduous-tree-favicon.png +0 -0
  20. {rowan_python-2.1.4 → rowan_python-2.1.6}/docs/index.md +0 -0
  21. {rowan_python-2.1.4 → rowan_python-2.1.6}/docs/rowan_rdkit.md +0 -0
  22. {rowan_python-2.1.4 → rowan_python-2.1.6}/docs/stylesheets/colors.css +0 -0
  23. {rowan_python-2.1.4 → rowan_python-2.1.6}/examples/PROTAC_solubility.py +0 -0
  24. {rowan_python-2.1.4 → rowan_python-2.1.6}/examples/aqueous_solubility.py +0 -0
  25. {rowan_python-2.1.4 → rowan_python-2.1.6}/examples/basic_calculation.py +0 -0
  26. {rowan_python-2.1.4 → rowan_python-2.1.6}/examples/basic_calculation_from_json.py +0 -0
  27. {rowan_python-2.1.4 → rowan_python-2.1.6}/examples/basic_calculation_with_constraint.py +0 -0
  28. {rowan_python-2.1.4 → rowan_python-2.1.6}/examples/basic_calculation_with_solvent.py +0 -0
  29. {rowan_python-2.1.4 → rowan_python-2.1.6}/examples/bde.py +0 -0
  30. {rowan_python-2.1.4 → rowan_python-2.1.6}/examples/cofolding_screen.py +0 -0
  31. {rowan_python-2.1.4 → rowan_python-2.1.6}/examples/conformer_dependent_redox.py +0 -0
  32. {rowan_python-2.1.4 → rowan_python-2.1.6}/examples/conformers.py +0 -0
  33. {rowan_python-2.1.4 → rowan_python-2.1.6}/examples/data/workflow_example.json +0 -0
  34. {rowan_python-2.1.4 → rowan_python-2.1.6}/examples/docking_screen.py +0 -0
  35. {rowan_python-2.1.4 → rowan_python-2.1.6}/examples/fukui_index.py +0 -0
  36. {rowan_python-2.1.4 → rowan_python-2.1.6}/examples/irc.py +0 -0
  37. {rowan_python-2.1.4 → rowan_python-2.1.6}/examples/macropka.py +0 -0
  38. {rowan_python-2.1.4 → rowan_python-2.1.6}/examples/multistage_opt.py +0 -0
  39. {rowan_python-2.1.4 → rowan_python-2.1.6}/examples/optimization.py +0 -0
  40. {rowan_python-2.1.4 → rowan_python-2.1.6}/examples/phenol_pka.py +0 -0
  41. {rowan_python-2.1.4 → rowan_python-2.1.6}/examples/pka.py +0 -0
  42. {rowan_python-2.1.4 → rowan_python-2.1.6}/examples/redox_potential.py +0 -0
  43. {rowan_python-2.1.4 → rowan_python-2.1.6}/examples/scan.py +0 -0
  44. {rowan_python-2.1.4 → rowan_python-2.1.6}/examples/tautomer.py +0 -0
  45. {rowan_python-2.1.4 → rowan_python-2.1.6}/mkdocs.yml +0 -0
  46. {rowan_python-2.1.4 → rowan_python-2.1.6}/rowan/__init__.py +0 -0
  47. {rowan_python-2.1.4 → rowan_python-2.1.6}/rowan/folder.py +0 -0
  48. {rowan_python-2.1.4 → rowan_python-2.1.6}/rowan/project.py +0 -0
  49. {rowan_python-2.1.4 → rowan_python-2.1.6}/rowan/protein.py +0 -0
  50. {rowan_python-2.1.4 → rowan_python-2.1.6}/rowan/py.typed +0 -0
  51. {rowan_python-2.1.4 → rowan_python-2.1.6}/rowan/rowan_rdkit/__init__.py +0 -0
  52. {rowan_python-2.1.4 → rowan_python-2.1.6}/rowan/rowan_rdkit/chem_utils.py +0 -0
  53. {rowan_python-2.1.4 → rowan_python-2.1.6}/rowan/user.py +0 -0
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: rowan-python
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- Version: 2.1.4
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+ Version: 2.1.6
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  Summary: Rowan Python Library
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  Project-URL: Homepage, https://github.com/rowansci/rowan-client
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  Project-URL: Bug Tracker, https://github.com/rowansci/rowan-client/issues
@@ -11,7 +11,7 @@ Requires-Dist: httpx
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  Requires-Dist: nest-asyncio
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  Requires-Dist: rdkit
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  Requires-Dist: setuptools
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- Requires-Dist: stjames>=0.0.83
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+ Requires-Dist: stjames>=0.0.109
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  Description-Content-Type: text/markdown
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  # Rowan Python Library
@@ -0,0 +1,17 @@
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+ from stjames import Molecule
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+
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+ import rowan
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+
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+ # Set ROWAN_API_KEY environment variable to your API key or set rowan.api_key directly
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+ # rowan.api_key = "rowan-sk..."
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+
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+ result = rowan.submit_ion_mobility_workflow(
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+ Molecule.from_smiles("c1ccccn1"),
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+ name="pyridinium CCS",
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+ protonate=True,
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+ )
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+
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+
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+ result.wait_for_result().fetch_latest(in_place=True)
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+
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+ print(result.data["average_ccs"]) # Å**2
@@ -0,0 +1,17 @@
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+ from stjames import Molecule
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+
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+ import rowan
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+
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+ # Set ROWAN_API_KEY environment variable to your API key or set rowan.api_key directly
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+ # rowan.api_key = "rowan-sk..."
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+
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+ result = rowan.submit_nmr_workflow(
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+ Molecule.from_smiles("O[C@H]1[C@H](C(C)C)CC[C@@H](C)C1"),
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+ name="menthol NMR",
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+ )
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+
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+ result.wait_for_result().fetch_latest(in_place=True)
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+
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+ # print hydrogen peaks
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+ for peak in result.data["predicted_peaks"]["1"]:
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+ print(peak)
@@ -12,6 +12,8 @@ result = rowan.submit_protein_cofolding_workflow(
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  ],
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  ligand_binding_affinity_index=0,
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  name="Torcetrapib Cofolding",
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+ do_pose_refinement=True,
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+ compute_strain=True,
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  )
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  print(result.wait_for_result().fetch_latest(in_place=True))
@@ -0,0 +1,16 @@
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+ from stjames import Molecule
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+
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+ import rowan
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+
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+ # Set ROWAN_API_KEY environment variable to your API key or set rowan.api_key directly
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+ # rowan.api_key = "rowan-sk..."
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+
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+ # ordinarily, we'd try a 3D conformer and see what the strain is.
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+ # here we'll investigate the strain of the autogenerated hexane conformer
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+ result = rowan.submit_strain_workflow(
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+ initial_molecule=Molecule.from_smiles("CCCCCC"),
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+ name="test autogen hexane strain",
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+ )
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+
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+
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+ print(result.wait_for_result().fetch_latest(in_place=True))