rootfig 0.2.0__tar.gz → 0.2.1__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {rootfig-0.2.0 → rootfig-0.2.1}/CONTRIBUTING.md +11 -3
- {rootfig-0.2.0 → rootfig-0.2.1}/PKG-INFO +2 -2
- {rootfig-0.2.0 → rootfig-0.2.1}/README.md +1 -1
- {rootfig-0.2.0 → rootfig-0.2.1}/docs/gallery.md +21 -15
- rootfig-0.2.1/docs/hooks/gallery.py +98 -0
- rootfig-0.2.1/docs/images/gallery/overlay_ratio.png +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/docs/images/gallery/ratio_reference.png +0 -0
- rootfig-0.2.1/docs/images/gallery/variable_bins.png +0 -0
- rootfig-0.2.1/docs/images/gallery/xbreak_ratio.png +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/docs/plotting.md +8 -1
- rootfig-0.2.0/examples/gallery.py → rootfig-0.2.1/examples/gallery/__init__.py +115 -292
- rootfig-0.2.1/examples/gallery/__main__.py +17 -0
- rootfig-0.2.1/examples/gallery/data.py +106 -0
- rootfig-0.2.1/examples/gallery/registry.py +103 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/__init__.py +1 -1
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/api.py +4 -2
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/plotting/figure.py +68 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/plotting/style.py +79 -7
- {rootfig-0.2.0 → rootfig-0.2.1}/tests/test_api.py +62 -7
- {rootfig-0.2.0 → rootfig-0.2.1}/tests/test_gallery.py +71 -9
- {rootfig-0.2.0 → rootfig-0.2.1}/tests/test_plotting.py +178 -0
- rootfig-0.2.0/docs/hooks/gallery.py +0 -63
- rootfig-0.2.0/docs/images/gallery/overlay_ratio.png +0 -0
- rootfig-0.2.0/docs/images/gallery/variable_bins.png +0 -0
- rootfig-0.2.0/docs/images/gallery/xbreak_ratio.png +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/.gitignore +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/LICENSE +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/docs/api.md +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/docs/composable.md +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/docs/ecosystem.md +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/docs/expressions.md +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/docs/images/gallery/arrays.png +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/docs/images/gallery/cms_density.png +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/docs/images/gallery/correlation.png +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/docs/images/gallery/efficiency.png +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/docs/images/gallery/expressions.png +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/docs/images/gallery/fill_stats.png +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/docs/images/gallery/hist2d.png +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/docs/images/gallery/log_axes.png +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/docs/images/gallery/luminosity.png +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/docs/images/gallery/many_plots.png +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/docs/images/gallery/object_vs_event.png +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/docs/images/gallery/profile.png +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/docs/images/gallery/quick.png +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/docs/images/gallery/robust_range.png +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/docs/images/gallery/stack_data.png +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/docs/images/gallery/style_colors.png +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/docs/index.md +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/docs/quickstart.md +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/mkdocs.yml +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/pyproject.toml +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/_typing.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/errors.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/expressions/__init__.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/expressions/functions.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/expressions/parser.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/histograms/__init__.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/histograms/build.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/histograms/cutflow.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/histograms/efficiency.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/histograms/normalize.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/histograms/pipeline.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/histograms/ratio.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/histograms/stats.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/io/__init__.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/io/sources.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/model/__init__.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/model/binning.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/model/cuts.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/model/samples.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/model/style.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/model/units.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/model/variables.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/plotting/__init__.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/plotting/annotations.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/plotting/correlation.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/plotting/hist1d.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/plotting/hist2d.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/plotting/points.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/plotting/ratio.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/plotting/result.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/py.typed +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/selection/__init__.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/src/rootfig/selection/columns.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/tests/conftest.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/tests/data/split_collection.root +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/tests/test_expressions.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/tests/test_histograms.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/tests/test_io.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/tests/test_model.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/tests/test_selection.py +0 -0
- {rootfig-0.2.0 → rootfig-0.2.1}/tests/test_tutorials.py +0 -0
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## Figures and the gallery
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`examples/gallery
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The `examples/gallery` package is both the showcase and the image-regression
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suite: `__init__.py` holds the shared `define()` block and the examples, `data.py`
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writes the toy files and `registry.py` extracts the source shown in the docs. Each
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example is a small function returning a `Plot`; `docs/gallery.md` shows every
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figure next to that function's source (a MkDocs hook, `docs/hooks/gallery.py`),
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and `tests/test_gallery.py` renders all of them and, with `--mpl`, compares
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@@ -97,7 +99,7 @@ them pixel-wise (pytest-mpl, RMS tolerance 2) against `docs/images/gallery/`.
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Those PNGs are therefore the documentation images *and* the baselines.
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```bash
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MPLBACKEND=Agg uv run python examples/gallery
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MPLBACKEND=Agg uv run python examples/gallery # look at examples/out/*.png
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uv run pytest tests/test_gallery.py --mpl # compare against the baselines
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uv run pytest tests/test_gallery.py --mpl-generate-path=docs/images/gallery # accept changes
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```
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differ elsewhere) and, when a comparison fails, uploads an HTML report with
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baseline, result and difference images as the `mpl-results-*` artifact. To add
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an example, register a function with `@example(name, title)` and give it a
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docstring; the test suite fails until its baseline image exists.
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docstring; the test suite fails until its baseline image exists. Its parameters
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are attribute names of `Dataset`, it runs inside the directory holding the toy
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files (so name them `"signal.root"`, never through a variable), and the hook
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prints only the body (blank lines and comments included) — write it as a user
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would. Put an object into `define()` — the *Setup* block of the docs page — only
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when several examples use it; anything a single example needs belongs in that
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example.
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## Pull requests
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Metadata-Version: 2.5
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Name: rootfig
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Version: 0.2.
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Version: 0.2.1
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Summary: Publication-quality figures straight from ROOT trees, without ROOT: uproot + Awkward + hist + mplhep with a TTree::Draw-like API.
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Project-URL: Homepage, https://github.com/jbeirer/rootfig
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Project-URL: Documentation, https://github.com/jbeirer/rootfig#readme
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These and a dozen more figures, each next to the code that made it, are in the
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[gallery](https://jbeirer.github.io/rootfig/gallery/). All of them come from
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[`examples/gallery
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[`examples/gallery`](examples/gallery/__init__.py), which writes toy ROOT files and
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draws every example in a few seconds; the same figures are pixel-compared in CI.
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## Installation
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These and a dozen more figures, each next to the code that made it, are in the
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[gallery](https://jbeirer.github.io/rootfig/gallery/). All of them come from
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## Installation
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The script writes a toy dataset (three simulated processes and one "observed"
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sample with muons, jets and event-level quantities, as `TTree`s)
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examples in a few seconds:
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sample with muons, jets and event-level quantities, as `TTree`s) into a
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the reference picture the test suite compares against, so what you see is what
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the current release draws. File names such as `signal.root` are those toy
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```
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<!-- gallery: quick -->
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Plain strings and `(bins, low, high)` tuples are accepted everywhere, as the
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one-liner shows. Once you draw more than one plot it pays to name the pieces:
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`Sample`, `Variable`, `Cut` and `Style` are small frozen dataclasses (see
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[Samples, variables, cuts and styles](composable.md)). The rest of this page
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shares four samples, three variables and one style, defined once:
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below is complete given the names above (plus `matplotlib.pyplot as plt` and
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`numpy as np` where they appear).
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<!-- gallery -->
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## Beyond figures
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# entries, mean, std, sem, skewness, min, max per sample and variable
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events = rf.load(
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Cuts compose with `&`, `|` and `~`, carry optional labels, and combine with
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"""MkDocs hook that fills ``docs/gallery.md`` from the ``examples/gallery`` package.
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examples;
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``<!-- gallery -->`` / ``<!-- gallery: name ... -->``
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one section per example with its title, description, image
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(``docs/images/gallery/<name>.png``) and the source of the example
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function. A marker naming examples renders exactly those, so a few can be
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shown before the setup section; a bare marker renders everything that no
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earlier marker on the page has shown yet, in registration order.
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The gallery module is imported, never executed, so building the docs needs no
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data and draws nothing. Because the images are also the baselines of
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``tests/test_gallery.py``, picture and code cannot drift apart.
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"""
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from __future__ import annotations
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import re
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from types import ModuleType
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ROOT = Path(__file__).resolve().parents[2]
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GALLERY_DIR = ROOT / "examples" / "gallery"
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SETUP_MARKER = "<!-- gallery-setup -->"
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GALLERY_MARKER = re.compile(r"<!-- gallery(?::\s*(?P<names>[\w\s,]+?))?\s*-->")
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def _load_gallery(name: str = "rootfig_gallery_docs") -> ModuleType:
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"""Import ``examples/gallery`` as a fresh package, without ``examples/`` on ``sys.path``.
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Every call re-executes the package (``mkdocs serve`` renders the page on each
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rebuild), so its submodules are evicted from ``sys.modules`` first: a cached
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``registry`` would keep its ``EXAMPLES`` list and the re-run decorators would
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"""
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for cached in [m for m in sys.modules if m == name or m.startswith(f"{name}.")]:
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del sys.modules[cached]
|
|
45
|
+
spec = importlib.util.spec_from_file_location(
|
|
46
|
+
name, GALLERY_DIR / "__init__.py", submodule_search_locations=[str(GALLERY_DIR)]
|
|
47
|
+
)
|
|
48
|
+
if spec is None or spec.loader is None:
|
|
49
|
+
msg = f"cannot load {GALLERY_DIR}"
|
|
50
|
+
raise RuntimeError(msg)
|
|
51
|
+
module = importlib.util.module_from_spec(spec)
|
|
52
|
+
sys.modules[name] = module
|
|
53
|
+
spec.loader.exec_module(module)
|
|
54
|
+
return module
|
|
55
|
+
|
|
56
|
+
|
|
57
|
+
def render_section(gallery: ModuleType, example: Any) -> str:
|
|
58
|
+
"""Markdown for one example: heading, description, image, code."""
|
|
59
|
+
code = gallery.body_source(example.func)
|
|
60
|
+
return (
|
|
61
|
+
f"## {example.title}\n\n"
|
|
62
|
+
f"{example.description}\n\n"
|
|
63
|
+
f'{{ width="75%" }}\n\n'
|
|
64
|
+
f"```python\n{code}```\n"
|
|
65
|
+
)
|
|
66
|
+
|
|
67
|
+
|
|
68
|
+
def expand_markers(markdown: str, gallery: ModuleType) -> str:
|
|
69
|
+
"""Replace every gallery marker, each example going to the first marker that asks."""
|
|
70
|
+
shown: set[str] = set()
|
|
71
|
+
by_name = {example.name: example for example in gallery.EXAMPLES}
|
|
72
|
+
|
|
73
|
+
def replace(match: re.Match[str]) -> str:
|
|
74
|
+
names = match.group("names")
|
|
75
|
+
if names is None:
|
|
76
|
+
wanted = [ex.name for ex in gallery.EXAMPLES if ex.name not in shown]
|
|
77
|
+
else:
|
|
78
|
+
asked = names.replace(",", " ").split()
|
|
79
|
+
unknown = [name for name in asked if name not in by_name]
|
|
80
|
+
if unknown:
|
|
81
|
+
msg = f"unknown gallery example(s) {unknown} in {match.group(0)!r}"
|
|
82
|
+
raise ValueError(msg)
|
|
83
|
+
# first marker wins: skip what an earlier marker (or this one) already rendered
|
|
84
|
+
wanted = list(dict.fromkeys(name for name in asked if name not in shown))
|
|
85
|
+
shown.update(wanted)
|
|
86
|
+
return "\n".join(render_section(gallery, by_name[name]) for name in wanted)
|
|
87
|
+
|
|
88
|
+
return GALLERY_MARKER.sub(replace, markdown)
|
|
89
|
+
|
|
90
|
+
|
|
91
|
+
def on_page_markdown(markdown: str, **_: Any) -> str:
|
|
92
|
+
"""Expand the gallery markers (MkDocs ``on_page_markdown`` event)."""
|
|
93
|
+
if SETUP_MARKER not in markdown and not GALLERY_MARKER.search(markdown):
|
|
94
|
+
return markdown
|
|
95
|
+
gallery = _load_gallery()
|
|
96
|
+
setup = gallery.body_source(gallery.define, returns="omit")
|
|
97
|
+
markdown = markdown.replace(SETUP_MARKER, f"```python\n{setup}```")
|
|
98
|
+
return expand_markers(markdown, gallery)
|
|
Binary file
|
|
Binary file
|
|
Binary file
|
|
Binary file
|
|
@@ -79,7 +79,10 @@ the signal. The values are returned as a `Ratio` in `Plot.ratios`.
|
|
|
79
79
|
|
|
80
80
|
`ratio_ylim` and
|
|
81
81
|
`ratio_label` override the automatic range (at least 0.5 to 1.5, widened to
|
|
82
|
-
cover the bulk of the points) and label (`Ratio to X` or `Data / MC`).
|
|
82
|
+
cover the bulk of the points) and label (`Ratio to X` or `Data / MC`). A
|
|
83
|
+
rotated y label is bounded by the height of the short ratio panel, so a long
|
|
84
|
+
one is shrunk and, if that is not enough, wrapped onto two lines; pass a
|
|
85
|
+
shorter `ratio_label` such as `"Ratio"` to keep it at full size. The
|
|
83
86
|
computed values are returned in `Plot.ratios` as
|
|
84
87
|
[`Ratio`][rootfig.Ratio] objects (`values`, `errors`, `band`, `edges`).
|
|
85
88
|
|
|
@@ -134,6 +137,10 @@ computed values are returned in `Plot.ratios` as
|
|
|
134
137
|
later renders exactly the layout that was computed, in the style's fonts.
|
|
135
138
|
- `Plot.fig`, `Plot.ax`, `Plot.ratio_ax` are plain matplotlib objects;
|
|
136
139
|
`Plot.histograms` wrap the `hist.Hist` objects with labels and statistics.
|
|
140
|
+
- In a notebook the figure is displayed automatically — it is a pyplot figure,
|
|
141
|
+
flushed by the inline backend at the end of the cell, so `%matplotlib inline`
|
|
142
|
+
is not needed. End the call with `;` to hide the `Plot` repr, and use
|
|
143
|
+
`Plot.close()` in loops that make many figures.
|
|
137
144
|
|
|
138
145
|
## 2D histograms and correlations
|
|
139
146
|
|