roman-snpit-snappl 0.2.3__tar.gz → 0.2.4__tar.gz

{roman_snpit_snappl-0.2.3 → roman_snpit_snappl-0.2.4}/.github/workflows/run_snappl_tests.yml

@@ -42,7 +42,7 @@ jobs:
 
       - name: pull latest SNPIT cpu image
         run: |
-          docker pull rknop/roman-snpit-env:cpu
+          docker pull rknop/roman-snpit-env:cpu-dev
 
       - name: run test
         run: |

{roman_snpit_snappl-0.2.3 → roman_snpit_snappl-0.2.4}/MANIFEST.in

@@ -8,4 +8,5 @@ global-exclude *.pyc *.o
 prune snappl/_version.py
 include LICENSE
 include README.rst
-include pyproject.toml
+include pyproject.toml
+prune snappl/tests

{roman_snpit_snappl-0.2.3/roman_snpit_snappl.egg-info → roman_snpit_snappl-0.2.4}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: roman_snpit_snappl
-Version: 0.2.3
+Version: 0.2.4
 Summary: Photometry utilities for the Roman SNPIT
 Author: Roman Supernove Project Infrastructure Team
 Maintainer-email: Roman SN PIT <raknop@lbl.gov>

roman_snpit_snappl-0.2.4/changes/14.snappl.rst

@@ -0,0 +1 @@
+Remove tests from what gets packaged for distribution

{roman_snpit_snappl-0.2.3 → roman_snpit_snappl-0.2.4/roman_snpit_snappl.egg-info}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: roman_snpit_snappl
-Version: 0.2.3
+Version: 0.2.4
 Summary: Photometry utilities for the Roman SNPIT
 Author: Roman Supernove Project Infrastructure Team
 Maintainer-email: Roman SN PIT <raknop@lbl.gov>

{roman_snpit_snappl-0.2.3 → roman_snpit_snappl-0.2.4}/roman_snpit_snappl.egg-info/SOURCES.txt

@@ -26,6 +26,7 @@ tox.ini
 changes/.gitkeep
 changes/10.snappl.rst
 changes/13.bugfix.rst
+changes/14.snappl.rst
 changes/3.snappl.rst
 changes/5.snappl.rst
 changes/8.snappl.rst
@@ -55,14 +56,4 @@ snappl/psf.py
 snappl/wcs.py
 snappl/_dev/__init__.py
 snappl/_dev/scm_version.py
-snappl/data/README.rst
-snappl/tests/__init__.py
-snappl/tests/conftest.py
-snappl/tests/docker-compose.yaml
-snappl/tests/test_opensim2024fitsimage.py
-snappl/tests/test_oversampled_image_psf.py
-snappl/tests/test_version_string.py
-snappl/tests/test_yaml_serialized_oversampled_image_psf.py
-snappl/tests/image_test_data/Roman_TDS_simple_model_F184_662_11.fits.gz
-snappl/tests/image_test_data/test_cutout.npy
-snappl/tests/psf_test_data/testpsfarray.npz
+snappl/data/README.rst

{roman_snpit_snappl-0.2.3 → roman_snpit_snappl-0.2.4}/snappl/_version.py

@@ -17,5 +17,5 @@ __version__: str
 __version_tuple__: VERSION_TUPLE
 version_tuple: VERSION_TUPLE
 
-__version__ = version = '0.2.3'
-__version_tuple__ = version_tuple = (0, 2, 3)
+__version__ = version = '0.2.4'
+__version_tuple__ = version_tuple = (0, 2, 4)

roman_snpit_snappl-0.2.3/snappl/tests/__init__.py

@@ -1 +0,0 @@
-"""This module contains package tests."""

roman_snpit_snappl-0.2.3/snappl/tests/conftest.py

@@ -1,5 +0,0 @@
-# this is a module level file
-import pytest # noqa: F401
-
-import tox # noqa: F401
-from tox.pytest import init_fixture # noqa: F401

roman_snpit_snappl-0.2.3/snappl/tests/docker-compose.yaml

@@ -1,44 +0,0 @@
-# This is a compose file that creates an environment in which you can
-# run tests.  Either just do
-#
-#   docker compose run runtests
-#
-# or, do
-#
-#   docker compose up -d shell
-#
-# to get a shell session running the SNPIT cpu image.  Connect to it
-# with
-#
-#   docker compose exec -it shell /bin/bash
-#
-# You can now do things in there, including
-#
-#   cd /snappl/snappl/tests
-#   pytest -v
-
-services:
-  shell:
-    image: rknop/roman-snpit-env:cpu-dev
-    entrypoint: [ "tail", "-f", "/etc/issue" ]
-    working_dir: /snappl
-    volumes:
-      - type: bind
-        source: ../..
-        target: /snappl
-
-  runtests:
-    image: rknop/roman-snpit-env:cpu-dev
-    working_dir: /snappl
-    entrypoint:
-      - /bin/sh
-      - -c
-      - |
-        pip install --no-deps -e . &&
-        cd snappl/tests &&
-        pytest -v
-    volumes:
-      - type: bind
-        source: ../..
-        target: /snappl
-

roman_snpit_snappl-0.2.3/snappl/tests/test_opensim2024fitsimage.py

@@ -1,56 +0,0 @@
-# TODO -- remove these next few lines!
-# This needs to be set up in an environment
-# where snappl is available.  This will happen "soon"
-# Get Rob to fix all of this.  For now, this is a hack
-# so you can work short term.
-import sys
-import pathlib
-sys.path.insert(0, str(pathlib.Path(__file__).parent/"extern/snappl"))
-# End of lines that will go away once we do this right. (<-- From Rob.)
-
-import numpy as np
-from snappl.image import OpenUniverse2024FITSImage
-import astropy
-import pytest
-from snpit_utils.logger import SNLogger
-
-
-def test_get_cutout():
-    imagepath = str(pathlib.Path(__file__).parent/'image_test_data/Roman_TDS_simple_model_F184_662_11.fits.gz')
-    image = OpenUniverse2024FITSImage(imagepath, None, 11)
-    ra, dec = 7.5942407686430995, -44.180904726970695
-    cutout = image.get_ra_dec_cutout(ra, dec, 5)
-    comparison_cutout = np.load(str(pathlib.Path(__file__).parent/'image_test_data/test_cutout.npy'),
-                                allow_pickle=True)
-    message = "The cutout does not match the comparison cutout"
-    assert np.array_equal(cutout._data, comparison_cutout), message
-    # I am directly comparing for equality here because these numbers should
-    # never actually change, provided the underlying image is unaltered. -Cole
-
-    # Now we intentionally try to get a no overlap error.
-    with pytest.raises(astropy.nddata.utils.NoOverlapError) as excinfo:
-        ra, dec = 7.6942407686430995, -44.280904726970695
-        cutout = image.get_ra_dec_cutout(ra, dec, 5)
-    message = f"This should have caused a NoOverlapError but was actually {str(excinfo.value)}"
-    assert 'do not overlap' in str(excinfo.value), message
-
-    # Now we intentionally try to get a partial overlap error.
-    with pytest.raises(astropy.nddata.utils.PartialOverlapError) as excinfo:
-        ra, dec = 7.69380043,-44.13231831
-        cutout = image.get_ra_dec_cutout(ra, dec, 55)
-        message = f"This should have caused a PartialOverlapError but was actually {str(excinfo.value)}"
-        assert 'partial' in str(excinfo.value), message
-
-
-def test_set_data():
-    imagepath = str(pathlib.Path(__file__).parent/'image_test_data/Roman_TDS_simple_model_F184_662_11.fits.gz')
-    image = OpenUniverse2024FITSImage(imagepath, None, 11)
-
-    with pytest.raises(ValueError) as excinfo:
-        image.data = 'cheese'
-        SNLogger.debug(image.data)
-    message = f"This should have caused a ValueError but was actually {str(excinfo.value)}"
-    assert 'must be a' in str(excinfo.value), message
-    old_data = image.get_data()[0]
-    image._data = old_data + 1
-    assert np.array_equal(image._data, old_data + 1), "The data was not set correctly"

roman_snpit_snappl-0.2.3/snappl/tests/test_oversampled_image_psf.py

@@ -1,24 +0,0 @@
-import pytest
-
-import numpy as np
-from astropy.io import fits
-
-from snappl.psf import OversampledImagePSF
-
-
-@pytest.fixture
-def testpsf():
-    loaded = np.load('psf_test_data/testpsfarray.npz')
-    arr = loaded['args']
-    mypsf = OversampledImagePSF.create( arr, 3832., 255., oversample_factor=3. )
-    return mypsf
-
-
-def test_create( testpsf ):
-    assert testpsf._data.sum() == pytest.approx( 1., rel=1e-9 )
-
-
-@pytest.mark.skip( reason="Comment out the skip to write some files for visual inspection" )
-def test_interactive_write_stamp_to_fits_for_visual_inspection( testpsf ):
-    fits.writeto( 'test_deleteme_orig.fits', testpsf._data, overwrite=True )
-    fits.writeto( 'test_deleteme_resamp.fits', testpsf.get_stamp(), overwrite=True )

roman_snpit_snappl-0.2.3/snappl/tests/test_version_string.py

@@ -1,3 +0,0 @@
-def test_version_is_string():
-    from snappl import __version__
-    assert isinstance(__version__, str)

roman_snpit_snappl-0.2.3/snappl/tests/test_yaml_serialized_oversampled_image_psf.py

@@ -1,49 +0,0 @@
-import yaml
-import random
-import pathlib
-import pytest
-
-import numpy as np
-
-from snappl.psf import YamlSerialized_OversampledImagePSF
-
-
-@pytest.fixture
-def testpsf():
-    loaded = np.load('psf_test_data/testpsfarray.npz')
-    arr = loaded['args']
-    mypsf = YamlSerialized_OversampledImagePSF.create( arr, 3832., 255., oversample_factor=3. )
-    return mypsf
-
-
-def test_write( testpsf ):
-    barf = pathlib.Path( ''.join( random.choices( 'abcdefghijklmnopqrstuvwxyz', k=10 ) ) )
-    try:
-        testpsf.write( barf )
-
-        y = yaml.safe_load( open(barf) )
-        assert isinstance( y, dict )
-        assert y['x0'] == 3832.
-        assert y['y0'] == 255.
-        assert y['oversamp'] == 3.
-        assert y['shape0'] == 77
-        assert y['shape1'] == 77
-        assert isinstance( y['data'], str )
-    finally:
-        barf.unlink( missing_ok=True )
-
-
-def test_read( testpsf ):
-    barf = pathlib.Path( ''.join( random.choices( 'abcdefghijklmnopqrstuvwxyz', k=10 ) ) )
-    try:
-        testpsf.write( barf )
-
-        bpsf = YamlSerialized_OversampledImagePSF()
-        bpsf.read( barf )
-        assert bpsf._x0 == 3832.
-        assert bpsf._y0 == 255.
-        assert bpsf._oversamp == 3.
-        assert bpsf._data.shape == (77,77)
-        assert bpsf._data.sum() == pytest.approx( 1., rel=1e-9 )
-    finally:
-        barf.unlink( missing_ok=True )