rogtk 0.1.11.dev0__tar.gz → 0.1.13__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {rogtk-0.1.11.dev0 → rogtk-0.1.13}/Cargo.lock +5 -5
- {rogtk-0.1.11.dev0 → rogtk-0.1.13}/Cargo.toml +1 -1
- {rogtk-0.1.11.dev0 → rogtk-0.1.13}/PKG-INFO +1 -1
- {rogtk-0.1.11.dev0 → rogtk-0.1.13}/pyproject.toml +1 -1
- {rogtk-0.1.11.dev0 → rogtk-0.1.13}/rogtk/__init__.py +12 -8
- {rogtk-0.1.11.dev0 → rogtk-0.1.13}/.github/workflows/publish_to_pypi.yml +0 -0
- {rogtk-0.1.11.dev0 → rogtk-0.1.13}/.gitignore +0 -0
- {rogtk-0.1.11.dev0 → rogtk-0.1.13}/.readthedocs.yaml +0 -0
- {rogtk-0.1.11.dev0 → rogtk-0.1.13}/Dockerfile +0 -0
- {rogtk-0.1.11.dev0 → rogtk-0.1.13}/Makefile +0 -0
- {rogtk-0.1.11.dev0 → rogtk-0.1.13}/README.md +0 -0
- {rogtk-0.1.11.dev0 → rogtk-0.1.13}/docs/requirements.txt +0 -0
- {rogtk-0.1.11.dev0 → rogtk-0.1.13}/docs/source/api/modules.rst +0 -0
- {rogtk-0.1.11.dev0 → rogtk-0.1.13}/docs/source/api/rogtk.rst +0 -0
- {rogtk-0.1.11.dev0 → rogtk-0.1.13}/docs/source/conf.py +0 -0
- {rogtk-0.1.11.dev0 → rogtk-0.1.13}/docs/source/index.rst +0 -0
- {rogtk-0.1.11.dev0 → rogtk-0.1.13}/requirements.txt +0 -0
- {rogtk-0.1.11.dev0 → rogtk-0.1.13}/rogtk/utils/utils.py +0 -0
- {rogtk-0.1.11.dev0 → rogtk-0.1.13}/rogtk/utils.py +0 -0
- {rogtk-0.1.11.dev0 → rogtk-0.1.13}/run.py +0 -0
- {rogtk-0.1.11.dev0 → rogtk-0.1.13}/src/bam.rs +0 -0
- {rogtk-0.1.11.dev0 → rogtk-0.1.13}/src/djfind.rs +0 -0
- {rogtk-0.1.11.dev0 → rogtk-0.1.13}/src/expressions.rs +0 -0
- {rogtk-0.1.11.dev0 → rogtk-0.1.13}/src/fracture.rs +0 -0
- {rogtk-0.1.11.dev0 → rogtk-0.1.13}/src/fracture_opt.rs +0 -0
- {rogtk-0.1.11.dev0 → rogtk-0.1.13}/src/graph_viz.rs +0 -0
- {rogtk-0.1.11.dev0 → rogtk-0.1.13}/src/lib.rs +0 -0
- {rogtk-0.1.11.dev0 → rogtk-0.1.13}/src/main.rs +0 -0
- {rogtk-0.1.11.dev0 → rogtk-0.1.13}/src/single_fastq.rs +0 -0
- {rogtk-0.1.11.dev0 → rogtk-0.1.13}/test.py +0 -0
- {rogtk-0.1.11.dev0 → rogtk-0.1.13}/tests/__init__.py +0 -0
- {rogtk-0.1.11.dev0 → rogtk-0.1.13}/tests/test_rogtk.py +0 -0
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@@ -2794,7 +2794,7 @@ checksum = "2b15c43186be67a4fd63bee50d0303afffcef381492ebe2c5d87f324e1b8815c"
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[[package]]
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name = "rogtk"
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version = "0.1.
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version = "0.1.13"
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dependencies = [
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"anyhow",
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"arrow",
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[[package]]
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name = "rustix"
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version = "1.0.
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version = "1.0.8"
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source = "registry+https://github.com/rust-lang/crates.io-index"
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checksum = "
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checksum = "11181fbabf243db407ef8df94a6ce0b2f9a733bd8be4ad02b4eda9602296cac8"
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dependencies = [
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"bitflags 2.9.1",
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"errno",
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"libc",
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"linux-raw-sys 0.9.4",
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"windows-sys 0.60.2",
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]
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[[package]]
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"fastrand",
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"getrandom 0.3.3",
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"once_cell",
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"rustix 1.0.
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]
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@@ -18,14 +18,18 @@ from rogtk.rogtk import (
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)
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@pl.api.register_expr_namespace("dna")
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class DnaNamespace:
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def __init__(self, expr: pl.Expr):
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self._expr = expr
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def reverse_complement(self) -> pl.Expr:
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"""Generate reverse complement of DNA sequences."""
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return register_plugin_function(
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plugin_path=Path(__file__).parent,
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function_name="reverse_complement_series",
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args=self._expr,
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is_elementwise=True,
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)
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#@pl.api.register_expr_namespace("cigar")
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def parse_cigar(expr: IntoExpr, block_dels: bool=False) -> pl.Expr:
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