rle-python 0.2.0__tar.gz

rle_python-0.2.0/.gitignore

@@ -0,0 +1,28 @@
+# Python
+__pycache__/
+*.py[cod]
+*.egg-info/
+.eggs/
+build/
+dist/
+
+# Virtual environments
+.venv
+.venv-*/
+venv/
+
+# Tooling caches
+.pytest_cache/
+
+# MyST docs build output
+_build/
+.ruff_cache/
+.mypy_cache/
+.ipynb_checkpoints/
+
+# uv
+# (keep uv.lock tracked once generated)
+
+# Large / generated test fixtures (kept local; tests skip when absent)
+tests/test_data/TEST_*
+tests/test_data/colombia_ecosystems*

rle_python-0.2.0/LICENSE

@@ -0,0 +1,201 @@
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rle_python-0.2.0/PKG-INFO

@@ -0,0 +1,96 @@
+Metadata-Version: 2.4
+Name: rle-python
+Version: 0.2.0
+Summary: Core tools for IUCN Red List of Ecosystems analysis with local and cloud data access
+Project-URL: Homepage, https://rle-assessment.github.io/rle-python/
+Project-URL: Documentation, https://rle-assessment.github.io/rle-python/
+Project-URL: Repository, https://github.com/RLE-Assessment/rle-python
+Project-URL: Issues, https://github.com/RLE-Assessment/rle-python/issues
+Author-email: Tyler Erickson <tyler@vorgeo.com>
+License-Expression: Apache-2.0
+License-File: LICENSE
+Keywords: AOO,EOO,IUCN,RLE,Red List of Ecosystems,biodiversity,ecology,geospatial
+Classifier: Development Status :: 4 - Beta
+Classifier: Intended Audience :: Science/Research
+Classifier: Operating System :: OS Independent
+Classifier: Programming Language :: Python :: 3
+Classifier: Programming Language :: Python :: 3.11
+Classifier: Programming Language :: Python :: 3.12
+Classifier: Topic :: Scientific/Engineering :: GIS
+Requires-Python: <3.13,>=3.11
+Requires-Dist: fsspec
+Requires-Dist: geopandas>=1.1.3
+Requires-Dist: numpy>=1.24.0
+Requires-Dist: pandas
+Requires-Dist: pyarrow
+Requires-Dist: pyproj
+Requires-Dist: pyyaml>=6.0.3
+Requires-Dist: rasterio>=1.3.0
+Requires-Dist: rasterstats
+Requires-Dist: rioxarray
+Requires-Dist: shapely>=2
+Requires-Dist: typer>=0.20.0
+Provides-Extra: aws
+Requires-Dist: s3fs; extra == 'aws'
+Provides-Extra: gcs
+Requires-Dist: gcsfs; extra == 'gcs'
+Provides-Extra: viz
+Requires-Dist: lonboard; extra == 'viz'
+Requires-Dist: matplotlib>=3.9.0; extra == 'viz'
+Description-Content-Type: text/markdown
+
+# rle-python
+
+Core tools for **IUCN Red List of Ecosystems (RLE)** analysis.
+
+`rle-python` provides the RLE data model and assessment business logic
+(Extent of Occurrence, Area of Occupancy grids, ecosystem code assignment,
+criteria/categories) together with **local and cloud-file data access** — it
+has no Earth Engine dependency.
+
+Everything imports under the shared `rle` namespace:
+
+```python
+from rle.core import Ecosystems, make_aoo_grid, make_eoo
+
+eco = Ecosystems.from_file("ecosystems.geojson", ecosystem_column="ECO_NAME")
+aoo = make_aoo_grid(eco).compute()
+print(aoo.cell_count, aoo.aoo_km2)
+
+eoo = make_eoo(eco).compute()
+print(eoo.area_km2)
+```
+
+## Installation
+
+```bash
+pip install rle-python            # local files
+pip install rle-python[gcs]       # + gs:// GeoParquet (gcsfs)
+pip install rle-python[aws]       # + s3:// GeoParquet (s3fs)
+pip install rle-python[viz]       # + interactive maps (lonboard) / static fallback
+```
+
+## Optional backends
+
+Additional data sources are provided by separate distributions that install
+into the same `rle` namespace and register themselves for discovery:
+
+```bash
+pip install rle-python-gee        # Google Earth Engine backends -> rle.gee
+```
+
+```python
+from rle.gee import GeeEcosystems
+eco = GeeEcosystems("projects/my-project/assets/ecosystems")
+```
+
+List the backends available in your environment:
+
+```bash
+rle backends
+```
+
+## Layout
+
+`rle-python` ships the `rle.core` package under a PEP 420 namespace (`rle/`),
+so multiple `rle-*` distributions can coexist without conflict.

rle_python-0.2.0/README.md

@@ -0,0 +1,55 @@
+# rle-python
+
+Core tools for **IUCN Red List of Ecosystems (RLE)** analysis.
+
+`rle-python` provides the RLE data model and assessment business logic
+(Extent of Occurrence, Area of Occupancy grids, ecosystem code assignment,
+criteria/categories) together with **local and cloud-file data access** — it
+has no Earth Engine dependency.
+
+Everything imports under the shared `rle` namespace:
+
+```python
+from rle.core import Ecosystems, make_aoo_grid, make_eoo
+
+eco = Ecosystems.from_file("ecosystems.geojson", ecosystem_column="ECO_NAME")
+aoo = make_aoo_grid(eco).compute()
+print(aoo.cell_count, aoo.aoo_km2)
+
+eoo = make_eoo(eco).compute()
+print(eoo.area_km2)
+```
+
+## Installation
+
+```bash
+pip install rle-python            # local files
+pip install rle-python[gcs]       # + gs:// GeoParquet (gcsfs)
+pip install rle-python[aws]       # + s3:// GeoParquet (s3fs)
+pip install rle-python[viz]       # + interactive maps (lonboard) / static fallback
+```
+
+## Optional backends
+
+Additional data sources are provided by separate distributions that install
+into the same `rle` namespace and register themselves for discovery:
+
+```bash
+pip install rle-python-gee        # Google Earth Engine backends -> rle.gee
+```
+
+```python
+from rle.gee import GeeEcosystems
+eco = GeeEcosystems("projects/my-project/assets/ecosystems")
+```
+
+List the backends available in your environment:
+
+```bash
+rle backends
+```
+
+## Layout
+
+`rle-python` ships the `rle.core` package under a PEP 420 namespace (`rle/`),
+so multiple `rle-*` distributions can coexist without conflict.

rle_python-0.2.0/pyproject.toml

@@ -0,0 +1,83 @@
+[project]
+name = "rle-python"
+version = "0.2.0"
+description = "Core tools for IUCN Red List of Ecosystems analysis with local and cloud data access"
+readme = "README.md"
+requires-python = ">=3.11,<3.13"
+license = "Apache-2.0"
+license-files = ["LICENSE"]
+authors = [
+    { name = "Tyler Erickson", email = "tyler@vorgeo.com" },
+]
+keywords = [
+    "IUCN",
+    "Red List of Ecosystems",
+    "RLE",
+    "AOO",
+    "EOO",
+    "ecology",
+    "biodiversity",
+    "geospatial",
+]
+classifiers = [
+    "Development Status :: 4 - Beta",
+    "Intended Audience :: Science/Research",
+    "Programming Language :: Python :: 3",
+    "Programming Language :: Python :: 3.11",
+    "Programming Language :: Python :: 3.12",
+    "Topic :: Scientific/Engineering :: GIS",
+    "Operating System :: OS Independent",
+]
+dependencies = [
+    "fsspec",
+    "geopandas>=1.1.3",
+    "numpy>=1.24.0",
+    "pandas",
+    "pyarrow",
+    "pyproj",
+    "pyyaml>=6.0.3",
+    "rasterio>=1.3.0",
+    "rasterstats",
+    "rioxarray",
+    "shapely>=2",
+    "typer>=0.20.0",
+]
+
+[project.optional-dependencies]
+viz = ["lonboard", "matplotlib>=3.9.0"]
+gcs = ["gcsfs"]
+aws = ["s3fs"]
+
+[project.urls]
+Homepage = "https://rle-assessment.github.io/rle-python/"
+Documentation = "https://rle-assessment.github.io/rle-python/"
+Repository = "https://github.com/RLE-Assessment/rle-python"
+Issues = "https://github.com/RLE-Assessment/rle-python/issues"
+
+[project.scripts]
+rle = "rle.core.cli:app"
+
+[project.entry-points."rle.backends"]
+core = "rle.core._entrypoints:register"
+
+[build-system]
+requires = ["hatchling>=1.27"]
+build-backend = "hatchling.build"
+
+[tool.hatch.build.targets.wheel]
+only-include = ["src/rle/core"]
+sources = ["src"]
+
+[tool.hatch.build.targets.sdist]
+include = ["src", "README.md", "LICENSE", "pyproject.toml"]
+
+[dependency-groups]
+dev = [
+    "pytest>=8.4.2",
+]
+
+[tool.pytest.ini_options]
+markers = [
+    "unit: Unit tests (mocked, fast, no Earth Engine authentication required)",
+    "integration: Integration tests (requires Earth Engine authentication, slower)",
+]

rle_python-0.2.0/src/rle/core/__init__.py

@@ -0,0 +1,77 @@
+"""RLE core — IUCN Red List of Ecosystems analysis with local/cloud data access.
+
+This is the backend-agnostic core. It provides the RLE data model
+(``Ecosystems``, ``AOOGrid``, ``EOO``), the assessment business logic, and
+local + cloud-file (``gs://``, ``s3://`` via fsspec) data access.
+
+Earth Engine support lives in the optional ``rle-python-gee`` distribution
+(import ``rle.gee``).
+"""
+
+from importlib.metadata import version, PackageNotFoundError
+
+try:
+    __version__ = version("rle-python")
+except PackageNotFoundError:
+    __version__ = "0.0.0.dev"
+
+from rle.core.ecosystems import (
+    Ecosystems,
+    EcosystemKind,
+    EcosystemsFile,
+    EcosystemsGeoParquet,
+    EcosystemsGeoDataFrame,
+    EcosystemsCOG,
+)
+from rle.core.eoo import (
+    EOO,
+    EOOVectorLocal,
+    EOONotComputedError,
+    make_eoo,
+)
+from rle.core.aoo import (
+    AOOGrid,
+    AOOGridVectorLocal,
+    AOOGridCOG,
+    AOOGridNotComputedError,
+    AOOGridPolygons,
+    AOOGridPolygonVectorLocal,
+    AOOGridPolygonsNotComputedError,
+    make_aoo_grid,
+    make_aoo_grid_cached,
+    make_aoo_polygons,
+    slugify_ecosystem_name,
+)
+from rle.core.registry import BackendInfo, iter_backends, list_backends
+
+__all__ = [
+    "__version__",
+    # data model
+    "Ecosystems",
+    "EcosystemKind",
+    "EcosystemsFile",
+    "EcosystemsGeoParquet",
+    "EcosystemsGeoDataFrame",
+    "EcosystemsCOG",
+    # EOO
+    "EOO",
+    "EOOVectorLocal",
+    "EOONotComputedError",
+    "make_eoo",
+    # AOO
+    "AOOGrid",
+    "AOOGridVectorLocal",
+    "AOOGridCOG",
+    "AOOGridNotComputedError",
+    "AOOGridPolygons",
+    "AOOGridPolygonVectorLocal",
+    "AOOGridPolygonsNotComputedError",
+    "make_aoo_grid",
+    "make_aoo_grid_cached",
+    "make_aoo_polygons",
+    "slugify_ecosystem_name",
+    # discovery
+    "BackendInfo",
+    "iter_backends",
+    "list_backends",
+]

rle_python-0.2.0/src/rle/core/_entrypoints.py

@@ -0,0 +1,51 @@
+"""Entry-point registration for the core (local/cloud-file) backends."""
+
+from __future__ import annotations
+
+from rle.core.registry import BackendInfo
+
+
+def _is_geojson(data) -> bool:
+    return isinstance(data, str) and data.endswith((".geojson", ".json"))
+
+
+def _is_geoparquet(data) -> bool:
+    return isinstance(data, str) and data.endswith(".parquet")
+
+
+def _is_cog(data) -> bool:
+    return isinstance(data, str) and data.endswith((".tif", ".tiff"))
+
+
+def register() -> list[BackendInfo]:
+    """Advertise the local/cloud-file ecosystem backends provided by rle-python."""
+    from rle.core.ecosystems import (
+        EcosystemsFile,
+        EcosystemsGeoParquet,
+        EcosystemsCOG,
+    )
+
+    dist = "rle-python"
+    return [
+        BackendInfo(
+            name="file",
+            cls=EcosystemsFile,
+            capability="ecosystems",
+            distribution=dist,
+            can_handle=_is_geojson,
+        ),
+        BackendInfo(
+            name="geoparquet",
+            cls=EcosystemsGeoParquet,
+            capability="ecosystems",
+            distribution=dist,
+            can_handle=_is_geoparquet,
+        ),
+        BackendInfo(
+            name="cog",
+            cls=EcosystemsCOG,
+            capability="ecosystems",
+            distribution=dist,
+            can_handle=_is_cog,
+        ),
+    ]