risk-network 0.0.9b34__tar.gz → 0.0.9b35__tar.gz

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Files changed (48) hide show
  1. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/PKG-INFO +1 -1
  2. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/__init__.py +1 -1
  3. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/network/graph/summary.py +6 -6
  4. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk_network.egg-info/PKG-INFO +1 -1
  5. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/LICENSE +0 -0
  6. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/MANIFEST.in +0 -0
  7. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/README.md +0 -0
  8. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/pyproject.toml +0 -0
  9. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/annotations/__init__.py +0 -0
  10. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/annotations/annotations.py +0 -0
  11. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/annotations/io.py +0 -0
  12. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/constants.py +0 -0
  13. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/log/__init__.py +0 -0
  14. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/log/console.py +0 -0
  15. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/log/parameters.py +0 -0
  16. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/neighborhoods/__init__.py +0 -0
  17. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/neighborhoods/api.py +0 -0
  18. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/neighborhoods/community.py +0 -0
  19. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/neighborhoods/domains.py +0 -0
  20. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/neighborhoods/neighborhoods.py +0 -0
  21. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/network/__init__.py +0 -0
  22. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/network/geometry.py +0 -0
  23. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/network/graph/__init__.py +0 -0
  24. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/network/graph/api.py +0 -0
  25. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/network/graph/graph.py +0 -0
  26. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/network/io.py +0 -0
  27. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/network/plotter/__init__.py +0 -0
  28. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/network/plotter/api.py +0 -0
  29. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/network/plotter/canvas.py +0 -0
  30. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/network/plotter/contour.py +0 -0
  31. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/network/plotter/labels.py +0 -0
  32. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/network/plotter/network.py +0 -0
  33. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/network/plotter/plotter.py +0 -0
  34. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/network/plotter/utils/colors.py +0 -0
  35. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/network/plotter/utils/layout.py +0 -0
  36. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/risk.py +0 -0
  37. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/stats/__init__.py +0 -0
  38. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/stats/permutation/__init__.py +0 -0
  39. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/stats/permutation/permutation.py +0 -0
  40. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/stats/permutation/test_functions.py +0 -0
  41. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/stats/significance.py +0 -0
  42. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/stats/stat_tests.py +0 -0
  43. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk_network.egg-info/SOURCES.txt +0 -0
  44. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk_network.egg-info/dependency_links.txt +0 -0
  45. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk_network.egg-info/requires.txt +0 -0
  46. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk_network.egg-info/top_level.txt +0 -0
  47. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/setup.cfg +0 -0
  48. {risk_network-0.0.9b34 → risk_network-0.0.9b35}/setup.py +0 -0
{risk_network-0.0.9b34 → risk_network-0.0.9b35}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.2
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  Name: risk-network
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- Version: 0.0.9b34
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+ Version: 0.0.9b35
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  Summary: A Python package for biological network analysis
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  Author: Ira Horecka
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  Author-email: Ira Horecka <ira89@icloud.com>
{risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/__init__.py RENAMED
@@ -7,4 +7,4 @@ RISK: Regional Inference of Significant Kinships
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  from risk.risk import RISK
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- __version__ = "0.0.9-beta.34"
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+ __version__ = "0.0.9-beta.35"
{risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk/network/graph/summary.py RENAMED
@@ -103,9 +103,9 @@ class Summary:
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  # Add minimum p-values and q-values to DataFrame
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  results[
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  [
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- "Enrichment P-value",
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+ "Enrichment P-Value",
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  "Enrichment Q-value",
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- "Depletion P-value",
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+ "Depletion P-Value",
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  "Depletion Q-value",
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  ]
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  ] = results.apply(
@@ -137,9 +137,9 @@ class Summary:
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  "Annotation Members in Network",
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  "Annotation Members in Network Count",
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  "Summed Significance Score",
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- "Enrichment P-value",
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+ "Enrichment P-Value",
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  "Enrichment Q-value",
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- "Depletion P-value",
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+ "Depletion P-Value",
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  "Depletion Q-value",
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  ]
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  ]
@@ -156,9 +156,9 @@ class Summary:
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  "Annotation Members in Network": "",
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  "Annotation Members in Network Count": 0,
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  "Summed Significance Score": 0.0,
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- "Enrichment P-value": 1.0,
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+ "Enrichment P-Value": 1.0,
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  "Enrichment Q-value": 1.0,
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- "Depletion P-value": 1.0,
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+ "Depletion P-Value": 1.0,
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  "Depletion Q-value": 1.0,
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  }
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  )
{risk_network-0.0.9b34 → risk_network-0.0.9b35}/risk_network.egg-info/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
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  Metadata-Version: 2.2
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  Name: risk-network
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- Version: 0.0.9b34
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+ Version: 0.0.9b35
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  Summary: A Python package for biological network analysis
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  Author: Ira Horecka
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  Author-email: Ira Horecka <ira89@icloud.com>
{risk_network-0.0.9b34 → risk_network-0.0.9b35}/LICENSE RENAMED
File without changes